| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is 222110101
Identifier: 222110101
GI number: 222110101
Start: 911369
End: 911836
Strand: Direct
Name: 222110101
Synonym: Dtpsy_0887
Alternate gene names: NA
Gene position: 911369-911836 (Clockwise)
Preceding gene: 222110100
Following gene: 222110104
Centisome position: 24.01
GC content: 66.88
Gene sequence:
>468_bases TTGGCCTTGAAGGTACTCGACCTGCTGTGTTCGCTCGACCACACGTTTGAAGGCTGGTTTGCGAGTGAGGGGGACTTTCA CAGCCAGCAGGCCCGTGGCCTGGTGCAGTGTCCGATGTGCGGAGACTCGCAGGTGCGCAAGGGGGTGAGCGCTCCCCGGT TGAACCTGAGCACCGGGGCCTCCACATCGCGGGAAGCCGCTGCGACGGCTCCCGCTCCCGTTCCGCCAGAGGGGGTATCC GCTGCCTTTCAGGCCGCATGGCTTGCCATGGCGCGCCGGGTCATGGCGCAGACCGAGGACGTGGGAGACCGCTTCGCATC CGAGGCACGCCGCATGCACTACGGCGAGACGGAAGAGCGCGGCATACGCGGCCAAGCGACGCCCCAGGAAACCGCCGAGC TGCTGGATGAGGGCATTGCAGTGCTGCCGCTGGCGTTGCCGCAGGCAGCGAAAGAGCCTCTGCACTAG
Upstream 100 bases:
>100_bases GGTCACCGGGGCGTTGTTCGTGACGCTGGCATTTCCGGGGTTCGTCTACCGCTACCTGATGCGTCGCCGCGACCGCAGCG CGGCCGAGGACTGATGAGGG
Downstream 100 bases:
>100_bases GGTTCTGGCTTTGGCTGGCTCTAGCGCGTCGGCGCCGCCCCCAATGACCCTTCAACGCGAGAACTGCAGCGCTGCCAAGC GGGCATAGACGCCGCCCTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 155; Mature: 154
Protein sequence:
>155_residues MALKVLDLLCSLDHTFEGWFASEGDFHSQQARGLVQCPMCGDSQVRKGVSAPRLNLSTGASTSREAAATAPAPVPPEGVS AAFQAAWLAMARRVMAQTEDVGDRFASEARRMHYGETEERGIRGQATPQETAELLDEGIAVLPLALPQAAKEPLH
Sequences:
>Translated_155_residues MALKVLDLLCSLDHTFEGWFASEGDFHSQQARGLVQCPMCGDSQVRKGVSAPRLNLSTGASTSREAAATAPAPVPPEGVS AAFQAAWLAMARRVMAQTEDVGDRFASEARRMHYGETEERGIRGQATPQETAELLDEGIAVLPLALPQAAKEPLH >Mature_154_residues ALKVLDLLCSLDHTFEGWFASEGDFHSQQARGLVQCPMCGDSQVRKGVSAPRLNLSTGASTSREAAATAPAPVPPEGVSA AFQAAWLAMARRVMAQTEDVGDRFASEARRMHYGETEERGIRGQATPQETAELLDEGIAVLPLALPQAAKEPLH
Specific function: Unknown
COG id: COG5319
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16586; Mature: 16455
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALKVLDLLCSLDHTFEGWFASEGDFHSQQARGLVQCPMCGDSQVRKGVSAPRLNLSTGA CHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCEECCCCCCHHHHCCCCCCCCCCCCCC STSREAAATAPAPVPPEGVSAAFQAAWLAMARRVMAQTEDVGDRFASEARRMHYGETEER CCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHC GIRGQATPQETAELLDEGIAVLPLALPQAAKEPLH CCCCCCCHHHHHHHHHCCCHHHHHHCCHHHCCCCC >Mature Secondary Structure ALKVLDLLCSLDHTFEGWFASEGDFHSQQARGLVQCPMCGDSQVRKGVSAPRLNLSTGA HHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCEECCCCCCHHHHCCCCCCCCCCCCCC STSREAAATAPAPVPPEGVSAAFQAAWLAMARRVMAQTEDVGDRFASEARRMHYGETEER CCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHC GIRGQATPQETAELLDEGIAVLPLALPQAAKEPLH CCCCCCCHHHHHHHHHCCCHHHHHHCCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA