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The map label for this gene is yicC [C]

Identifier: 222110075

GI number: 222110075

Start: 885821

End: 886729

Strand: Direct

Name: yicC [C]

Synonym: Dtpsy_0861

Alternate gene names: 222110075

Gene position: 885821-886729 (Clockwise)

Preceding gene: 222110069

Following gene: 222110076

Centisome position: 23.33

GC content: 68.21

Gene sequence:

>909_bases
ATGGCAGTTTACAGCATGACCGGATACGCCAGCGCGCAGCGCGGCGTGGCTACTGCAGGGGACGACAAGGACGGGCCCGT
ACGGCGCCTGGGCCTGGAAATACGTGCGGTCAACAGCCGCTTTCTGGACCTGTCTTTCCGCCTGTCCGATGAACTGCGCG
CCCAGGAGCCGGCGCTGCGAGCCCTGCTCACGCAGCGCCTCAAGCGCGGCAAGGTCGAGGTGCGCGCTTTCGTGGACAAC
GACGACTCCGCCGCGCTCGCCGAGCCATCCCCGCGCATCTTGCAACGGGTAGGCGCGGTGCAGGATGCAGTGCGTTCGTG
GCTGCCCGACGCCAGGCCGCTGTCGGTGGCCGACGCGCTGCGCTTGTGCGCCAATGCCGGTGCTCCTGCGCTGGACTGGA
GCGAAACGGCAGCGCGCGCGGCCGAGCAGGCGCTGGACGACCTGGTTGCCGCGCGCCAACGCGAGGGCGAACGCCTGGCC
GCCATGCTGCAGGAGCGCATCGCGCAGTTGCGCGAGCTGGCCCGCCAGGCGGTGCCGCTGGTTCCGCAGCTCGTGGAGCA
GCAGCGCCAGCGCTTCATGGAGCGCTGGAAGGAGGCCATGTCGCTGGCCGAAGGCGCGGTGGTGCCCGAAGCGGCCCAGG
ACCGCGCCCTGACCGAGGCCACGGCCTTTGCCATCCGCATCGACGTCGCGGAAGAAGTCACGCGGCTGCAGTCGCACCTG
GACGAGATTGCCCGCCTGCTCAAAAAAGGCGGCGAGGTCGGCAAGCGGCTGGATTTTCTGATCCAGGAACTGCACCGTGA
AGCCAACACGCTGGGCTCCAAGTCGGCTGCCATGGACCTCACGCGCATCAGCGTGGACATGAAGGTGCTGATCGAGCAGA
TGCGCGAGCAAGTGCAGAACATCGAGTGA

Upstream 100 bases:

>100_bases
CCGGCTTGATTTTTGACATAGGAAGCGAAGGCAGTCGTGGGCGCGGGTGGGGAACCCGGATAATCGCTGGATCGCAAGCA
ACCAACCACCGAAAAGTCCA

Downstream 100 bases:

>100_bases
TAATCCTGTTTTGATAGCGGCTCACGCACACTCCATATGGACTATCCCGGAAATTTGTTTGTAGTCTCTGCCCCCAGCGG
GGCGGGTAAATCCAGCTTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 302; Mature: 301

Protein sequence:

>302_residues
MAVYSMTGYASAQRGVATAGDDKDGPVRRLGLEIRAVNSRFLDLSFRLSDELRAQEPALRALLTQRLKRGKVEVRAFVDN
DDSAALAEPSPRILQRVGAVQDAVRSWLPDARPLSVADALRLCANAGAPALDWSETAARAAEQALDDLVAARQREGERLA
AMLQERIAQLRELARQAVPLVPQLVEQQRQRFMERWKEAMSLAEGAVVPEAAQDRALTEATAFAIRIDVAEEVTRLQSHL
DEIARLLKKGGEVGKRLDFLIQELHREANTLGSKSAAMDLTRISVDMKVLIEQMREQVQNIE

Sequences:

>Translated_302_residues
MAVYSMTGYASAQRGVATAGDDKDGPVRRLGLEIRAVNSRFLDLSFRLSDELRAQEPALRALLTQRLKRGKVEVRAFVDN
DDSAALAEPSPRILQRVGAVQDAVRSWLPDARPLSVADALRLCANAGAPALDWSETAARAAEQALDDLVAARQREGERLA
AMLQERIAQLRELARQAVPLVPQLVEQQRQRFMERWKEAMSLAEGAVVPEAAQDRALTEATAFAIRIDVAEEVTRLQSHL
DEIARLLKKGGEVGKRLDFLIQELHREANTLGSKSAAMDLTRISVDMKVLIEQMREQVQNIE
>Mature_301_residues
AVYSMTGYASAQRGVATAGDDKDGPVRRLGLEIRAVNSRFLDLSFRLSDELRAQEPALRALLTQRLKRGKVEVRAFVDND
DSAALAEPSPRILQRVGAVQDAVRSWLPDARPLSVADALRLCANAGAPALDWSETAARAAEQALDDLVAARQREGERLAA
MLQERIAQLRELARQAVPLVPQLVEQQRQRFMERWKEAMSLAEGAVVPEAAQDRALTEATAFAIRIDVAEEVTRLQSHLD
EIARLLKKGGEVGKRLDFLIQELHREANTLGSKSAAMDLTRISVDMKVLIEQMREQVQNIE

Specific function: Unknown

COG id: COG1561

COG function: function code S; Uncharacterized stress-induced protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0701 family [H]

Homologues:

Organism=Escherichia coli, GI1790075, Length=311, Percent_Identity=34.7266881028939, Blast_Score=144, Evalue=7e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005229
- InterPro:   IPR013551
- InterPro:   IPR013527 [H]

Pfam domain/function: PF08340 DUF1732; PF03755 YicC_N [H]

EC number: NA

Molecular weight: Translated: 33466; Mature: 33334

Theoretical pI: Translated: 5.59; Mature: 5.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVYSMTGYASAQRGVATAGDDKDGPVRRLGLEIRAVNSRFLDLSFRLSDELRAQEPALR
CCEECCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHH
ALLTQRLKRGKVEVRAFVDNDDSAALAEPSPRILQRVGAVQDAVRSWLPDARPLSVADAL
HHHHHHHHCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
RLCANAGAPALDWSETAARAAEQALDDLVAARQREGERLAAMLQERIAQLRELARQAVPL
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCH
VPQLVEQQRQRFMERWKEAMSLAEGAVVPEAAQDRALTEATAFAIRIDVAEEVTRLQSHL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DEIARLLKKGGEVGKRLDFLIQELHREANTLGSKSAAMDLTRISVDMKVLIEQMREQVQN
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
IE
CC
>Mature Secondary Structure 
AVYSMTGYASAQRGVATAGDDKDGPVRRLGLEIRAVNSRFLDLSFRLSDELRAQEPALR
CEECCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHH
ALLTQRLKRGKVEVRAFVDNDDSAALAEPSPRILQRVGAVQDAVRSWLPDARPLSVADAL
HHHHHHHHCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
RLCANAGAPALDWSETAARAAEQALDDLVAARQREGERLAAMLQERIAQLRELARQAVPL
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCH
VPQLVEQQRQRFMERWKEAMSLAEGAVVPEAAQDRALTEATAFAIRIDVAEEVTRLQSHL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DEIARLLKKGGEVGKRLDFLIQELHREANTLGSKSAAMDLTRISVDMKVLIEQMREQVQN
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
IE
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]