| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is gmk [H]
Identifier: 222110076
GI number: 222110076
Start: 886766
End: 887386
Strand: Direct
Name: gmk [H]
Synonym: Dtpsy_0862
Alternate gene names: 222110076
Gene position: 886766-887386 (Clockwise)
Preceding gene: 222110075
Following gene: 222110077
Centisome position: 23.36
GC content: 62.48
Gene sequence:
>621_bases ATGGACTATCCCGGAAATTTGTTTGTAGTCTCTGCCCCCAGCGGGGCGGGTAAATCCAGCTTGGTCAAGGCCCTGCTGGA GCTGGACTCGCATGTGCAGCCCTCCGTGTCGCACACGACCCGCGCGCCGCGCGGGCAGGAAAAGCACGGCCGCGAGTACT TCTTCGCTTCCGAGCAGGAGTTCGACGCGATGGTGGCGGCTAACGGCTTCGTCGAGTGGGCGAACGTCCATGGACGCCGT TATGGAACCTCCCGCAAGGTGATCGAGGAGCGCGTGGCCCAGGGGGCGGACGTGGTCTTGGAAATCGACTTTCAGGGCGC GCTGCAGATCAAGCAGGCCTTCGCGAACGCCGTGCTGGTCTTTGTGCTGCCGCCCAGCTGGGACGAGTTGCGCGCCCGGC TGGAACGCCGGGGCGAAGATGCGCCCGACGTGATTGACCTACGCCTGGAGAACGCGGCAGAGGAAATGGCGCAGGCCAGC AAATTCGACTTCGTTATAATCAATGAGGTCTTTGAGCGAGCGCTTTTCGACCTGAAAACCATCGTTCATGCCCAGCGTCT CAAGTACGCCGCCCAGCGCCGCGCCCGGGCCGAAACCTTCGAGTCGCTCAATATTCCCTGA
Upstream 100 bases:
>100_bases CATCAGCGTGGACATGAAGGTGCTGATCGAGCAGATGCGCGAGCAAGTGCAGAACATCGAGTGATAATCCTGTTTTGATA GCGGCTCACGCACACTCCAT
Downstream 100 bases:
>100_bases TCCCTGGAGAACACCATGGCCCGCATTACCGTGGAAGACTGCCTCGAGCAGATTCCCAACCGTTTTCAACTGGTGCTCGC CGCCACCTACCGTGCCCGCA
Product: guanylate kinase
Products: NA
Alternate protein names: GMP kinase [H]
Number of amino acids: Translated: 206; Mature: 206
Protein sequence:
>206_residues MDYPGNLFVVSAPSGAGKSSLVKALLELDSHVQPSVSHTTRAPRGQEKHGREYFFASEQEFDAMVAANGFVEWANVHGRR YGTSRKVIEERVAQGADVVLEIDFQGALQIKQAFANAVLVFVLPPSWDELRARLERRGEDAPDVIDLRLENAAEEMAQAS KFDFVIINEVFERALFDLKTIVHAQRLKYAAQRRARAETFESLNIP
Sequences:
>Translated_206_residues MDYPGNLFVVSAPSGAGKSSLVKALLELDSHVQPSVSHTTRAPRGQEKHGREYFFASEQEFDAMVAANGFVEWANVHGRR YGTSRKVIEERVAQGADVVLEIDFQGALQIKQAFANAVLVFVLPPSWDELRARLERRGEDAPDVIDLRLENAAEEMAQAS KFDFVIINEVFERALFDLKTIVHAQRLKYAAQRRARAETFESLNIP >Mature_206_residues MDYPGNLFVVSAPSGAGKSSLVKALLELDSHVQPSVSHTTRAPRGQEKHGREYFFASEQEFDAMVAANGFVEWANVHGRR YGTSRKVIEERVAQGADVVLEIDFQGALQIKQAFANAVLVFVLPPSWDELRARLERRGEDAPDVIDLRLENAAEEMAQAS KFDFVIINEVFERALFDLKTIVHAQRLKYAAQRRARAETFESLNIP
Specific function: Essential for recycling GMP and indirectly, cGMP [H]
COG id: COG0194
COG function: function code F; Guanylate kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 guanylate kinase-like domain [H]
Homologues:
Organism=Homo sapiens, GI226874831, Length=175, Percent_Identity=37.7142857142857, Blast_Score=110, Evalue=1e-24, Organism=Homo sapiens, GI226874833, Length=175, Percent_Identity=37.7142857142857, Blast_Score=110, Evalue=1e-24, Organism=Homo sapiens, GI4504221, Length=175, Percent_Identity=37.7142857142857, Blast_Score=110, Evalue=1e-24, Organism=Homo sapiens, GI38570142, Length=180, Percent_Identity=28.8888888888889, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI14780902, Length=188, Percent_Identity=25, Blast_Score=74, Evalue=8e-14, Organism=Homo sapiens, GI21361598, Length=190, Percent_Identity=26.8421052631579, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI52630447, Length=189, Percent_Identity=28.042328042328, Blast_Score=65, Evalue=3e-11, Organism=Homo sapiens, GI4505237, Length=174, Percent_Identity=27.0114942528736, Blast_Score=65, Evalue=5e-11, Organism=Homo sapiens, GI262118263, Length=174, Percent_Identity=27.0114942528736, Blast_Score=65, Evalue=5e-11, Organism=Homo sapiens, GI262118255, Length=174, Percent_Identity=27.0114942528736, Blast_Score=65, Evalue=5e-11, Organism=Homo sapiens, GI262118259, Length=174, Percent_Identity=27.0114942528736, Blast_Score=65, Evalue=5e-11, Organism=Homo sapiens, GI111154074, Length=176, Percent_Identity=28.4090909090909, Blast_Score=65, Evalue=5e-11, Organism=Escherichia coli, GI1790080, Length=192, Percent_Identity=49.4791666666667, Blast_Score=189, Evalue=1e-49, Organism=Caenorhabditis elegans, GI193203132, Length=176, Percent_Identity=38.0681818181818, Blast_Score=125, Evalue=2e-29, Organism=Caenorhabditis elegans, GI17508835, Length=176, Percent_Identity=38.0681818181818, Blast_Score=124, Evalue=3e-29, Organism=Saccharomyces cerevisiae, GI6320662, Length=182, Percent_Identity=38.4615384615385, Blast_Score=125, Evalue=5e-30, Organism=Drosophila melanogaster, GI21356141, Length=158, Percent_Identity=41.1392405063291, Blast_Score=116, Evalue=1e-26, Organism=Drosophila melanogaster, GI161077626, Length=172, Percent_Identity=31.9767441860465, Blast_Score=74, Evalue=5e-14, Organism=Drosophila melanogaster, GI116007136, Length=173, Percent_Identity=31.7919075144509, Blast_Score=73, Evalue=1e-13, Organism=Drosophila melanogaster, GI85724806, Length=173, Percent_Identity=31.7919075144509, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI45554481, Length=173, Percent_Identity=31.7919075144509, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI45554489, Length=173, Percent_Identity=31.7919075144509, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI24640542, Length=173, Percent_Identity=31.7919075144509, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI221330162, Length=164, Percent_Identity=31.7073170731707, Blast_Score=68, Evalue=4e-12, Organism=Drosophila melanogaster, GI221330166, Length=164, Percent_Identity=31.7073170731707, Blast_Score=68, Evalue=4e-12, Organism=Drosophila melanogaster, GI221330164, Length=164, Percent_Identity=31.7073170731707, Blast_Score=68, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008144 - InterPro: IPR008145 - InterPro: IPR020590 - InterPro: IPR017665 [H]
Pfam domain/function: PF00625 Guanylate_kin [H]
EC number: =2.7.4.8 [H]
Molecular weight: Translated: 23102; Mature: 23102
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: PS50052 GUANYLATE_KINASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDYPGNLFVVSAPSGAGKSSLVKALLELDSHVQPSVSHTTRAPRGQEKHGREYFFASEQE CCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCEEEECCCHH FDAMVAANGFVEWANVHGRRYGTSRKVIEERVAQGADVVLEIDFQGALQIKQAFANAVLV HHHHHHHCCCHHHHHHCCHHCCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCEEEE FVLPPSWDELRARLERRGEDAPDVIDLRLENAAEEMAQASKFDFVIINEVFERALFDLKT EEECCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHH IVHAQRLKYAAQRRARAETFESLNIP HHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MDYPGNLFVVSAPSGAGKSSLVKALLELDSHVQPSVSHTTRAPRGQEKHGREYFFASEQE CCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCEEEECCCHH FDAMVAANGFVEWANVHGRRYGTSRKVIEERVAQGADVVLEIDFQGALQIKQAFANAVLV HHHHHHHCCCHHHHHHCCHHCCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCEEEE FVLPPSWDELRARLERRGEDAPDVIDLRLENAAEEMAQASKFDFVIINEVFERALFDLKT EEECCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHH IVHAQRLKYAAQRRARAETFESLNIP HHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA