| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is 222110049
Identifier: 222110049
GI number: 222110049
Start: 867016
End: 867369
Strand: Direct
Name: 222110049
Synonym: Dtpsy_0835
Alternate gene names: NA
Gene position: 867016-867369 (Clockwise)
Preceding gene: 222110044
Following gene: 222110050
Centisome position: 22.84
GC content: 64.41
Gene sequence:
>354_bases ATGCCCCATTCCCCCATCACCGCAGGAACCAAAGTCGTCTACCAGGAAGGCGTCTACACGGTCCGCGCCGTAGACGGCAA CGTTCTCGAGCTGGCTTACCACACGGGCGATTTCTTCCGCCTGGTGCACGCCTCCAGCGTCCTCGTTTGCCCACCCCCTG CCACCCAAACGGCGGCCAGCTTGCCGGCTCCAGTCGCCGGGCAGGGGGCGGGCACCCCTTCTGCGTTCCTCGCATGGGAA TGTGTCGATGGACCTGATCCTCTGCCGCGTTGGGAGCGGCACTGCGGCTCTCGATCTGAGGTGTTGATCGGTGCCTCCTT TGCCCTGTTGCTGGACCCTTGGGGCAACGTATGA
Upstream 100 bases:
>100_bases ACACGAGTTGAATAAATCATACTAGGCTCTTGTTATTCCTTGTGAATAACGATAGGCTCCGTTCGTTACGCGACTTGTGT AACGCATCTAGGAGCCGGCA
Downstream 100 bases:
>100_bases GGCTCGTCTCCAAACACGCCCAGGTCGGCTACCAGACCCCCGGCGAGCGCCCCGGCTGCCGCAACTGCGCGCACTTTGAA GTCACGCGCCATGACAGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 117; Mature: 116
Protein sequence:
>117_residues MPHSPITAGTKVVYQEGVYTVRAVDGNVLELAYHTGDFFRLVHASSVLVCPPPATQTAASLPAPVAGQGAGTPSAFLAWE CVDGPDPLPRWERHCGSRSEVLIGASFALLLDPWGNV
Sequences:
>Translated_117_residues MPHSPITAGTKVVYQEGVYTVRAVDGNVLELAYHTGDFFRLVHASSVLVCPPPATQTAASLPAPVAGQGAGTPSAFLAWE CVDGPDPLPRWERHCGSRSEVLIGASFALLLDPWGNV >Mature_116_residues PHSPITAGTKVVYQEGVYTVRAVDGNVLELAYHTGDFFRLVHASSVLVCPPPATQTAASLPAPVAGQGAGTPSAFLAWEC VDGPDPLPRWERHCGSRSEVLIGASFALLLDPWGNV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12339; Mature: 12208
Theoretical pI: Translated: 5.47; Mature: 5.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHSPITAGTKVVYQEGVYTVRAVDGNVLELAYHTGDFFRLVHASSVLVCPPPATQTAAS CCCCCCCCCCEEEEECCEEEEEEECCCEEEEEECCCCEEEEECCCEEEEECCCCCCCHHC LPAPVAGQGAGTPSAFLAWECVDGPDPLPRWERHCGSRSEVLIGASFALLLDPWGNV CCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHCCCCCEEEEECEEEEEECCCCCC >Mature Secondary Structure PHSPITAGTKVVYQEGVYTVRAVDGNVLELAYHTGDFFRLVHASSVLVCPPPATQTAAS CCCCCCCCCEEEEECCEEEEEEECCCEEEEEECCCCEEEEECCCEEEEECCCCCCCHHC LPAPVAGQGAGTPSAFLAWECVDGPDPLPRWERHCGSRSEVLIGASFALLLDPWGNV CCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHCCCCCEEEEECEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA