| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is 222109956
Identifier: 222109956
GI number: 222109956
Start: 771710
End: 772096
Strand: Direct
Name: 222109956
Synonym: Dtpsy_0741
Alternate gene names: NA
Gene position: 771710-772096 (Clockwise)
Preceding gene: 222109955
Following gene: 222109957
Centisome position: 20.33
GC content: 64.34
Gene sequence:
>387_bases ATGAACAACGATATCGTCGACGTGGAGCCCAGCGAGCGGGCCGAATCCCTCAAGACGGTCGGATGGGTCAGCTACATCCT GCACCTGATCGTGGCCGTGGCCGCGGTACTGCCGGGCGCGCAGCCTAGCGCCGCGCTGCTCATCGTCGCGCTGGTGATCG ACCTGGTGAAGAAAAGCGATGCCGCGGGTACCTGGCAGGCCAGCCATTTCTCCTGGCGCGTGCGCACCGTGATCTGGGCC GGCGTGCTGTACGCGGTCACTGCGCCGCTGTGGCTGGTTTTCTTTTTCCCGGGTTGGATCGCCTGGGGCCTGATCTCCAT CTGGTTCCTCTACCGCATCGTGCGCGGCATGGTGGCCATGAACAAAGGGCAGGCCATCGATGCCTGA
Upstream 100 bases:
>100_bases ACGTGATTGCCGAGCTGGAGCGCCGCGAGGGCATCAGCGGCATCGAGGAAAAGGCCCTGCGCAAGGCCGCAGCCCGCAGC AGCGAAGAAGGAGGTGCGTG
Downstream 100 bases:
>100_bases GCAGGGCGCGCCGCAGCGGCTCAACCTCGCGCTGCAGGGCGGCGGCTCGCATGGCGCGCTGACCTGGGGCGTGCTGGATG CGTTGCTCGAAGACGGCCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 128; Mature: 128
Protein sequence:
>128_residues MNNDIVDVEPSERAESLKTVGWVSYILHLIVAVAAVLPGAQPSAALLIVALVIDLVKKSDAAGTWQASHFSWRVRTVIWA GVLYAVTAPLWLVFFFPGWIAWGLISIWFLYRIVRGMVAMNKGQAIDA
Sequences:
>Translated_128_residues MNNDIVDVEPSERAESLKTVGWVSYILHLIVAVAAVLPGAQPSAALLIVALVIDLVKKSDAAGTWQASHFSWRVRTVIWA GVLYAVTAPLWLVFFFPGWIAWGLISIWFLYRIVRGMVAMNKGQAIDA >Mature_128_residues MNNDIVDVEPSERAESLKTVGWVSYILHLIVAVAAVLPGAQPSAALLIVALVIDLVKKSDAAGTWQASHFSWRVRTVIWA GVLYAVTAPLWLVFFFPGWIAWGLISIWFLYRIVRGMVAMNKGQAIDA
Specific function: Unknown
COG id: COG3671
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14108; Mature: 14108
Theoretical pI: Translated: 9.00; Mature: 9.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNDIVDVEPSERAESLKTVGWVSYILHLIVAVAAVLPGAQPSAALLIVALVIDLVKKSD CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCC AAGTWQASHFSWRVRTVIWAGVLYAVTAPLWLVFFFPGWIAWGLISIWFLYRIVRGMVAM CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NKGQAIDA CCCCCCCC >Mature Secondary Structure MNNDIVDVEPSERAESLKTVGWVSYILHLIVAVAAVLPGAQPSAALLIVALVIDLVKKSD CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCC AAGTWQASHFSWRVRTVIWAGVLYAVTAPLWLVFFFPGWIAWGLISIWFLYRIVRGMVAM CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NKGQAIDA CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA