| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is hisH [H]
Identifier: 222109946
GI number: 222109946
Start: 761187
End: 761855
Strand: Direct
Name: hisH [H]
Synonym: Dtpsy_0731
Alternate gene names: 222109946
Gene position: 761187-761855 (Clockwise)
Preceding gene: 222109945
Following gene: 222109947
Centisome position: 20.05
GC content: 68.16
Gene sequence:
>669_bases ATGAATAGTGAAGCAAAAACCGTCGCGGTCGTGGACTACGGCATGGGCAACCTGCGCTCCGTCTCGCAGGCCGTGCAGGT CGCGGCGCAGGGCAGCGGTTTCCGGGTAATGGTCACCGCGCACCCCGATGAGGTGCGCGCGGCCGACCGTGTGGTGTTGC CCGGCCAGGGCGCCATGCCGGACTGCATGCGCGAGTTGCGGGAGTCGGGCCTGCTCGAATCCGTGCTGGAGGCTGCCGCA TCCAAGCCGCTGTTTGGCGTATGTGTGGGCATGCAGATGCTGCTGGACCACAGCGCCGAGGGCGACACCCCCGGGCTGGG CCTGATCCCGGGCGAGGTGCTCAAGTTCGACCTGGCCGGGCGCACCCAGCCCGACGGCAGCCGCTACAAGGTCCCCCAGA TGGGCTGGAACCGCGTGCGCCAGGCGCGCCACGGCGGCGTGGCGCACCCGGTATGGGCGGGCGTGCCCGACGACAGCTAC TTCTACTTCGTGCACAGCTTCTACGCGCGCCCGGCCAACCCGCTGCACTGCGCCGGCGAGGCTGACTACGGCGGCCCCTT TGCTGCGGCCATCGCACGCGATAATATTTTTGCTACCCAGTTCCACCCGGAGAAAAGCGCCGAGCACGGCCTGGCGCTGT ACCGCAACTTCTTGCACTGGAAGCCCTGA
Upstream 100 bases:
>100_bases GCGACCCGCGCGCCGCAGGCGTGATCCCCTCCACCAAGGGTTCCCTGTAAAATTCAAGCCAAATTGGCCTGTAACGCTTA TCCATCAAGCGCAAGCAGCT
Downstream 100 bases:
>100_bases TTCTTCAACCCGGCAGGGCCGGGCCTTGTGCGGCTCGCCCCATTCCCCGCTCACCATCATGCTGCTCATCCCCGCCATCG ACCTCAAGGACGGCCACTGC
Product: imidazole glycerol phosphate synthase subunit hish
Products: D-erythro-imidazole-glycerol-phosphate; AICAR; L-glutamate [C]
Alternate protein names: IGP synthase glutamine amidotransferase subunit; IGP synthase subunit hisH; ImGP synthase subunit hisH; IGPS subunit hisH [H]
Number of amino acids: Translated: 222; Mature: 222
Protein sequence:
>222_residues MNSEAKTVAVVDYGMGNLRSVSQAVQVAAQGSGFRVMVTAHPDEVRAADRVVLPGQGAMPDCMRELRESGLLESVLEAAA SKPLFGVCVGMQMLLDHSAEGDTPGLGLIPGEVLKFDLAGRTQPDGSRYKVPQMGWNRVRQARHGGVAHPVWAGVPDDSY FYFVHSFYARPANPLHCAGEADYGGPFAAAIARDNIFATQFHPEKSAEHGLALYRNFLHWKP
Sequences:
>Translated_222_residues MNSEAKTVAVVDYGMGNLRSVSQAVQVAAQGSGFRVMVTAHPDEVRAADRVVLPGQGAMPDCMRELRESGLLESVLEAAA SKPLFGVCVGMQMLLDHSAEGDTPGLGLIPGEVLKFDLAGRTQPDGSRYKVPQMGWNRVRQARHGGVAHPVWAGVPDDSY FYFVHSFYARPANPLHCAGEADYGGPFAAAIARDNIFATQFHPEKSAEHGLALYRNFLHWKP >Mature_222_residues MNSEAKTVAVVDYGMGNLRSVSQAVQVAAQGSGFRVMVTAHPDEVRAADRVVLPGQGAMPDCMRELRESGLLESVLEAAA SKPLFGVCVGMQMLLDHSAEGDTPGLGLIPGEVLKFDLAGRTQPDGSRYKVPQMGWNRVRQARHGGVAHPVWAGVPDDSY FYFVHSFYARPANPLHCAGEADYGGPFAAAIARDNIFATQFHPEKSAEHGLALYRNFLHWKP
Specific function: IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The hisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to hisF for the synthesis of IGP and AICAR [H]
COG id: COG0118
COG function: function code E; Glutamine amidotransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788334, Length=214, Percent_Identity=37.8504672897196, Blast_Score=130, Evalue=1e-31, Organism=Saccharomyces cerevisiae, GI6319725, Length=225, Percent_Identity=32.8888888888889, Blast_Score=100, Evalue=2e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017926 - InterPro: IPR000991 - InterPro: IPR010139 - InterPro: IPR016226 [H]
Pfam domain/function: PF00117 GATase [H]
EC number: 2.4.2.- [C]
Molecular weight: Translated: 24034; Mature: 24034
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: PS00442 GATASE_TYPE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSEAKTVAVVDYGMGNLRSVSQAVQVAAQGSGFRVMVTAHPDEVRAADRVVLPGQGAMP CCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEECCHHHHHCCEEEECCCCCCH DCMRELRESGLLESVLEAAASKPLFGVCVGMQMLLDHSAEGDTPGLGLIPGEVLKFDLAG HHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHEEEECCC RTQPDGSRYKVPQMGWNRVRQARHGGVAHPVWAGVPDDSYFYFVHSFYARPANPLHCAGE CCCCCCCEEECCCCCHHHHHHHHCCCCCCCEECCCCCCCEEHEEEHHHCCCCCCEEECCC ADYGGPFAAAIARDNIFATQFHPEKSAEHGLALYRNFLHWKP CCCCCCHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure MNSEAKTVAVVDYGMGNLRSVSQAVQVAAQGSGFRVMVTAHPDEVRAADRVVLPGQGAMP CCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEECCHHHHHCCEEEECCCCCCH DCMRELRESGLLESVLEAAASKPLFGVCVGMQMLLDHSAEGDTPGLGLIPGEVLKFDLAG HHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHEEEECCC RTQPDGSRYKVPQMGWNRVRQARHGGVAHPVWAGVPDDSYFYFVHSFYARPANPLHCAGE CCCCCCCEEECCCCCHHHHHHHHCCCCCCCEECCCCCCCEEHEEEHHHCCCCCCEEECCC ADYGGPFAAAIARDNIFATQFHPEKSAEHGLALYRNFLHWKP CCCCCCHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: phosphoribulosylformimino-AICAR-P; L-glutamine [C]
Specific reaction: phosphoribulosylformimino-AICAR-P + L-glutamine = D-erythro-imidazole-glycerol-phosphate + AICAR + L-glutamate [C]
General reaction: Transferases; Glycosyltransferases; Pentosyltransferases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12754231 [H]