| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
Click here to switch to the map view.
The map label for this gene is 222109917
Identifier: 222109917
GI number: 222109917
Start: 730225
End: 730776
Strand: Direct
Name: 222109917
Synonym: Dtpsy_0702
Alternate gene names: NA
Gene position: 730225-730776 (Clockwise)
Preceding gene: 222109916
Following gene: 222109918
Centisome position: 19.23
GC content: 52.17
Gene sequence:
>552_bases ATGAAGCGGATTACTGCCCTGATTGCCTTGAGTGCTGTCTTTGCGCTGGCGGGATGCGGACCCAGCGGGGAAGAAGAGCT TCGTCAGTGGATGTCGGAATTGCGCGCAACAACCAAGCCGCGTATTACCCCGCTGAAAGAGCCTAAGCAATTCTTTCCTC AAGATTATGTTTCGGATAGTGGTATTGATCCGTTCAATTCAATGAAACTGACATTGGCTTTGCGGCGGGACTCGGCGGAA TCAGCGGCTAATGCTTCCCTGATTGCCCCGGAGATGGCAAGGCGGAAGGAGCCGTTGGAGGCATATCCGCTCGATGCAAT CCGGATGGTGGGGAGCATGAATAAGGCAGGTATACCTACCGCATTGATCAGTGTCGATAAGTTGCTGTATCAAGTCCGGG CGGGTAACTATCTAGGACAAAACTACGGGAAAATCGTCGGTATTACCGAGACCAATATGCGCCTGCGAGAGATTGTCCAA GATCCGACGGGCGATTGGGTAGAGCGTATGACAACACTGGATCTGCAAGAGGGGAATGAGGTGAAGAAATGA
Upstream 100 bases:
>100_bases ATGCAGCCGGCAATTTGACGCTTGAGGCGACAGCAAGAACGTTCCGTTATCTGGATCCTGAGGAAATACAGGCGCAGAAG GCGGCTAAGGGGGGTAAGAA
Downstream 100 bases:
>100_bases TTCAAGAGAAGCTTCGTTTACACGCGTACTGGCGGATGTTGGGAGCCGCAGTTGTGGCTGCGCTGACGGTGTCTGTGGCG CAAGCTCGCGGATCTATTGA
Product: pilus assembly protein pilp
Products: NA
Alternate protein names: Pilus Assembly Protein PilQ; Type IV Pilus Biogenesis Protein PilP; Type 4 Fimbrial Biogenesis Protein PilP; Type IV Pilus Assembly Protein PilP; Tfp Pilus Assembly Protein PilP; Fimbrial Assembly Protein; Pilus Assembly Protein; Lipoprotein; Type IV Pilus Assembly Protein Pilp; Pilus Assembly Protein Pilp; Fimbrial Type-4 Assembly Lipoprotein; Type IV Fimbrial Biogenesis Protein PilP; Type 4 Fimbrial Biogenesis Protein; Methyl-Accepting Chemotaxis Sensory Transducer; Type IV Pilus Assembly Protein
Number of amino acids: Translated: 183; Mature: 183
Protein sequence:
>183_residues MKRITALIALSAVFALAGCGPSGEEELRQWMSELRATTKPRITPLKEPKQFFPQDYVSDSGIDPFNSMKLTLALRRDSAE SAANASLIAPEMARRKEPLEAYPLDAIRMVGSMNKAGIPTALISVDKLLYQVRAGNYLGQNYGKIVGITETNMRLREIVQ DPTGDWVERMTTLDLQEGNEVKK
Sequences:
>Translated_183_residues MKRITALIALSAVFALAGCGPSGEEELRQWMSELRATTKPRITPLKEPKQFFPQDYVSDSGIDPFNSMKLTLALRRDSAE SAANASLIAPEMARRKEPLEAYPLDAIRMVGSMNKAGIPTALISVDKLLYQVRAGNYLGQNYGKIVGITETNMRLREIVQ DPTGDWVERMTTLDLQEGNEVKK >Mature_183_residues MKRITALIALSAVFALAGCGPSGEEELRQWMSELRATTKPRITPLKEPKQFFPQDYVSDSGIDPFNSMKLTLALRRDSAE SAANASLIAPEMARRKEPLEAYPLDAIRMVGSMNKAGIPTALISVDKLLYQVRAGNYLGQNYGKIVGITETNMRLREIVQ DPTGDWVERMTTLDLQEGNEVKK
Specific function: Unknown
COG id: COG3168
COG function: function code NU; Tfp pilus assembly protein PilP
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20317; Mature: 20317
Theoretical pI: Translated: 8.42; Mature: 8.42
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRITALIALSAVFALAGCGPSGEEELRQWMSELRATTKPRITPLKEPKQFFPQDYVSDS CHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCHHHCCCC GIDPFNSMKLTLALRRDSAESAANASLIAPEMARRKEPLEAYPLDAIRMVGSMNKAGIPT CCCCCCCEEEEEEEECCCHHHHCCCHHCCHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCH ALISVDKLLYQVRAGNYLGQNYGKIVGITETNMRLREIVQDPTGDWVERMTTLDLQEGNE HHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHCCCCCHHHHHHHHHCCCCCCC VKK CCC >Mature Secondary Structure MKRITALIALSAVFALAGCGPSGEEELRQWMSELRATTKPRITPLKEPKQFFPQDYVSDS CHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCHHHCCCC GIDPFNSMKLTLALRRDSAESAANASLIAPEMARRKEPLEAYPLDAIRMVGSMNKAGIPT CCCCCCCEEEEEEEECCCHHHHCCCHHCCHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCH ALISVDKLLYQVRAGNYLGQNYGKIVGITETNMRLREIVQDPTGDWVERMTTLDLQEGNE HHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHCCCCCHHHHHHHHHCCCCCCC VKK CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA