Definition Acidovorax ebreus TPSY chromosome, complete genome.
Accession NC_011992
Length 3,796,573

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The map label for this gene is 222109917

Identifier: 222109917

GI number: 222109917

Start: 730225

End: 730776

Strand: Direct

Name: 222109917

Synonym: Dtpsy_0702

Alternate gene names: NA

Gene position: 730225-730776 (Clockwise)

Preceding gene: 222109916

Following gene: 222109918

Centisome position: 19.23

GC content: 52.17

Gene sequence:

>552_bases
ATGAAGCGGATTACTGCCCTGATTGCCTTGAGTGCTGTCTTTGCGCTGGCGGGATGCGGACCCAGCGGGGAAGAAGAGCT
TCGTCAGTGGATGTCGGAATTGCGCGCAACAACCAAGCCGCGTATTACCCCGCTGAAAGAGCCTAAGCAATTCTTTCCTC
AAGATTATGTTTCGGATAGTGGTATTGATCCGTTCAATTCAATGAAACTGACATTGGCTTTGCGGCGGGACTCGGCGGAA
TCAGCGGCTAATGCTTCCCTGATTGCCCCGGAGATGGCAAGGCGGAAGGAGCCGTTGGAGGCATATCCGCTCGATGCAAT
CCGGATGGTGGGGAGCATGAATAAGGCAGGTATACCTACCGCATTGATCAGTGTCGATAAGTTGCTGTATCAAGTCCGGG
CGGGTAACTATCTAGGACAAAACTACGGGAAAATCGTCGGTATTACCGAGACCAATATGCGCCTGCGAGAGATTGTCCAA
GATCCGACGGGCGATTGGGTAGAGCGTATGACAACACTGGATCTGCAAGAGGGGAATGAGGTGAAGAAATGA

Upstream 100 bases:

>100_bases
ATGCAGCCGGCAATTTGACGCTTGAGGCGACAGCAAGAACGTTCCGTTATCTGGATCCTGAGGAAATACAGGCGCAGAAG
GCGGCTAAGGGGGGTAAGAA

Downstream 100 bases:

>100_bases
TTCAAGAGAAGCTTCGTTTACACGCGTACTGGCGGATGTTGGGAGCCGCAGTTGTGGCTGCGCTGACGGTGTCTGTGGCG
CAAGCTCGCGGATCTATTGA

Product: pilus assembly protein pilp

Products: NA

Alternate protein names: Pilus Assembly Protein PilQ; Type IV Pilus Biogenesis Protein PilP; Type 4 Fimbrial Biogenesis Protein PilP; Type IV Pilus Assembly Protein PilP; Tfp Pilus Assembly Protein PilP; Fimbrial Assembly Protein; Pilus Assembly Protein; Lipoprotein; Type IV Pilus Assembly Protein Pilp; Pilus Assembly Protein Pilp; Fimbrial Type-4 Assembly Lipoprotein; Type IV Fimbrial Biogenesis Protein PilP; Type 4 Fimbrial Biogenesis Protein; Methyl-Accepting Chemotaxis Sensory Transducer; Type IV Pilus Assembly Protein

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MKRITALIALSAVFALAGCGPSGEEELRQWMSELRATTKPRITPLKEPKQFFPQDYVSDSGIDPFNSMKLTLALRRDSAE
SAANASLIAPEMARRKEPLEAYPLDAIRMVGSMNKAGIPTALISVDKLLYQVRAGNYLGQNYGKIVGITETNMRLREIVQ
DPTGDWVERMTTLDLQEGNEVKK

Sequences:

>Translated_183_residues
MKRITALIALSAVFALAGCGPSGEEELRQWMSELRATTKPRITPLKEPKQFFPQDYVSDSGIDPFNSMKLTLALRRDSAE
SAANASLIAPEMARRKEPLEAYPLDAIRMVGSMNKAGIPTALISVDKLLYQVRAGNYLGQNYGKIVGITETNMRLREIVQ
DPTGDWVERMTTLDLQEGNEVKK
>Mature_183_residues
MKRITALIALSAVFALAGCGPSGEEELRQWMSELRATTKPRITPLKEPKQFFPQDYVSDSGIDPFNSMKLTLALRRDSAE
SAANASLIAPEMARRKEPLEAYPLDAIRMVGSMNKAGIPTALISVDKLLYQVRAGNYLGQNYGKIVGITETNMRLREIVQ
DPTGDWVERMTTLDLQEGNEVKK

Specific function: Unknown

COG id: COG3168

COG function: function code NU; Tfp pilus assembly protein PilP

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20317; Mature: 20317

Theoretical pI: Translated: 8.42; Mature: 8.42

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRITALIALSAVFALAGCGPSGEEELRQWMSELRATTKPRITPLKEPKQFFPQDYVSDS
CHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCHHHCCCC
GIDPFNSMKLTLALRRDSAESAANASLIAPEMARRKEPLEAYPLDAIRMVGSMNKAGIPT
CCCCCCCEEEEEEEECCCHHHHCCCHHCCHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCH
ALISVDKLLYQVRAGNYLGQNYGKIVGITETNMRLREIVQDPTGDWVERMTTLDLQEGNE
HHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHCCCCCHHHHHHHHHCCCCCCC
VKK
CCC
>Mature Secondary Structure
MKRITALIALSAVFALAGCGPSGEEELRQWMSELRATTKPRITPLKEPKQFFPQDYVSDS
CHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCHHHCCCC
GIDPFNSMKLTLALRRDSAESAANASLIAPEMARRKEPLEAYPLDAIRMVGSMNKAGIPT
CCCCCCCEEEEEEEECCCHHHHCCCHHCCHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCH
ALISVDKLLYQVRAGNYLGQNYGKIVGITETNMRLREIVQDPTGDWVERMTTLDLQEGNE
HHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHCCCCCHHHHHHHHHCCCCCCC
VKK
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA