| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is yedZ [H]
Identifier: 222109909
GI number: 222109909
Start: 721681
End: 722340
Strand: Direct
Name: yedZ [H]
Synonym: Dtpsy_0694
Alternate gene names: 222109909
Gene position: 721681-722340 (Clockwise)
Preceding gene: 222109908
Following gene: 222109912
Centisome position: 19.01
GC content: 68.64
Gene sequence:
>660_bases ATGGGGCATGCACGCCTTTCGGGCAGTACTCCCGCGCTGGCGGGTCGCGGCTGGGGCGCGCGCGTGTTGTTGCACCCGGC AGCCAAGCCGGTGCTGTTTGTGCTGTGCCTGCTACCACTCGCCTGGCTGGTGTATGGGGCGGCCGCCGATCGCCTGGGCG CCAACCCTGCCGAAGCCCTGATCCGCTCCACGGGCGACTGGACGCTGCGCATGCTGTGCCTCACCCTGGCAGTCACACCC CTGAGGCTGGCGCTGGCCCAGCCGCCGCTGGCACGCTTTCGGCGCATGCTAGGGCTGTACACCTTCGCCTACGCGGCACT CCACTTGCTGTGCTACAGCTGGTTCGACATGGGGCTGGATGTGCCGGAAATCGTTCGTGACGTGCTCAAGCGCCCCTTCA TCCTGGTGGGCATGGGCTGCTTTGCGGTGCTGCTGGCGCTGGCGGCCACGTCGTTCAACCGGGCCATGCGCTGGATGGGC GGGCGGCGCTGGCAGCAACTGCACCGCGGCGTGTACCTGGCCGCGGGGCTGGCGATCCTGCACTTTTTCTGGATGCGGTC GGGCAAGAACGACTTTGCCGAGGTGGCGGTCTATGCCGCCATCCTGGCGGCGTTGCTGCTCGCTCGGCCTTGGTTGCGCC GGCGCCGCCGTGTCGTCTGA
Upstream 100 bases:
>100_bases GCGGACTGTTCGCCAAGAAGCGCAAGACCCTGCTGTTCAATGGCTACGAGGCCCAGGTGGGACAGCTCTACGCGGGCATG GATCTGCGCAAGTTCTACTG
Downstream 100 bases:
>100_bases TTGCTATTAATTAGATAGCTGCTAGCGCTTTCTGGGTAAGCGCTAGAGCCGATTTTTATCAAACTTTCAGGCGCGCACGG CCTGCAGCGCAGGGCGCACC
Product: ferric reductase
Products: NA
Alternate protein names: Flavocytochrome yedZ [H]
Number of amino acids: Translated: 219; Mature: 218
Protein sequence:
>219_residues MGHARLSGSTPALAGRGWGARVLLHPAAKPVLFVLCLLPLAWLVYGAAADRLGANPAEALIRSTGDWTLRMLCLTLAVTP LRLALAQPPLARFRRMLGLYTFAYAALHLLCYSWFDMGLDVPEIVRDVLKRPFILVGMGCFAVLLALAATSFNRAMRWMG GRRWQQLHRGVYLAAGLAILHFFWMRSGKNDFAEVAVYAAILAALLLARPWLRRRRRVV
Sequences:
>Translated_219_residues MGHARLSGSTPALAGRGWGARVLLHPAAKPVLFVLCLLPLAWLVYGAAADRLGANPAEALIRSTGDWTLRMLCLTLAVTP LRLALAQPPLARFRRMLGLYTFAYAALHLLCYSWFDMGLDVPEIVRDVLKRPFILVGMGCFAVLLALAATSFNRAMRWMG GRRWQQLHRGVYLAAGLAILHFFWMRSGKNDFAEVAVYAAILAALLLARPWLRRRRRVV >Mature_218_residues GHARLSGSTPALAGRGWGARVLLHPAAKPVLFVLCLLPLAWLVYGAAADRLGANPAEALIRSTGDWTLRMLCLTLAVTPL RLALAQPPLARFRRMLGLYTFAYAALHLLCYSWFDMGLDVPEIVRDVLKRPFILVGMGCFAVLLALAATSFNRAMRWMGG RRWQQLHRGVYLAAGLAILHFFWMRSGKNDFAEVAVYAAILAALLLARPWLRRRRRVV
Specific function: Is probably involved in the electron transfer between its heme and the molybdenum cofactor of the reductase catalytic subunit yedY [H]
COG id: COG2717
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the yedZ family [H]
Homologues:
Organism=Escherichia coli, GI1788283, Length=149, Percent_Identity=41.6107382550336, Blast_Score=107, Evalue=4e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013130 - InterPro: IPR022837 [H]
Pfam domain/function: PF01794 Ferric_reduct [H]
EC number: NA
Molecular weight: Translated: 24380; Mature: 24248
Theoretical pI: Translated: 11.85; Mature: 11.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGHARLSGSTPALAGRGWGARVLLHPAAKPVLFVLCLLPLAWLVYGAAADRLGANPAEAL CCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH IRSTGDWTLRMLCLTLAVTPLRLALAQPPLARFRRMLGLYTFAYAALHLLCYSWFDMGLD HHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC VPEIVRDVLKRPFILVGMGCFAVLLALAATSFNRAMRWMGGRRWQQLHRGVYLAAGLAIL HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH HFFWMRSGKNDFAEVAVYAAILAALLLARPWLRRRRRVV HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure GHARLSGSTPALAGRGWGARVLLHPAAKPVLFVLCLLPLAWLVYGAAADRLGANPAEAL CCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH IRSTGDWTLRMLCLTLAVTPLRLALAQPPLARFRRMLGLYTFAYAALHLLCYSWFDMGLD HHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC VPEIVRDVLKRPFILVGMGCFAVLLALAATSFNRAMRWMGGRRWQQLHRGVYLAAGLAIL HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH HFFWMRSGKNDFAEVAVYAAILAALLLARPWLRRRRRVV HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: Mo [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA