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The map label for this gene is yedY [H]

Identifier: 222109908

GI number: 222109908

Start: 720683

End: 721681

Strand: Direct

Name: yedY [H]

Synonym: Dtpsy_0693

Alternate gene names: 222109908

Gene position: 720683-721681 (Clockwise)

Preceding gene: 222109907

Following gene: 222109909

Centisome position: 18.98

GC content: 63.76

Gene sequence:

>999_bases
ATGTTGATTCCTACCCGAGACAACGGTTACATCCACCCTTGCGCCGGCGAGATCACGCCGCGCGCCGTCTATGAGCAGCG
ACGCGCCATGCTCCGCCTGCTGGCAGCGGGTGCTGGTGGCGCGGCGATGGCCGGCTGGGCAGGGCGTGTCGCCCTCGCTG
ACCAAGTCCGCCGACCGGGGCGGCTTGCACCCCTGCCGGGTGCACCGTCCGCCGTGCCGGGCGCGGTGACCATGGAGAAG
GTCACCGAGTACCAGGATGCCACCACGTACAACAATTTCTACGAATTCGGCACGGACAAGAGCGACCCCGCGCGCAATGC
CCATACCCTGAAAACCCGCCCCTGGACCGTGGAAGTGGAAGGCTTGGTCAACAAGCCACGGCGCTTCGATATCGACGAGC
TGCTCAAGCTCAGCGCGCAGGAGGATCGCATCTACCGCCTGCGCTGCGTCGAGGGCTGGTCCATGGTGATCCCCTGGGTG
GGGTACTCGTTGGCAGAGTTGATCAAGCGGGTGGAGCCGCAGGGCAGTGCCAAGTACGTCGAGTTCGTCACGCTGGCGGA
CAAAGCCACCATGCCTTACGTGGGCTCGCATGTGCTGGACTGGCCTTACACCGAAGGCCTGCGCTTGGACGAGGCCATGC
ATCCGCTCACGCTGCTCGCCTTCGGCATGTATGGCGAGGTGCTGCCCAATCAGAATGGCGCACCGGTGCGCATCGTCGTG
CCGTGGAAGTACGGCTTCAAGAGCGCCAAGAGCATCGTCAAGATCCGCTTCGTCGAGAAGGAGCCTGGTACCGCATGGAA
CAAGGCTGCACGGCAGGAGTACGGCTTTTATTCCAACGTGAATCCGGATGTGGACCACCCGCGCTGGAGCCAGGCCACCG
AACGGCGTATCGGCGAGGGCGGACTGTTCGCCAAGAAGCGCAAGACCCTGCTGTTCAATGGCTACGAGGCCCAGGTGGGA
CAGCTCTACGCGGGCATGGATCTGCGCAAGTTCTACTGA

Upstream 100 bases:

>100_bases
ACCTTGTAACCCTCGGCGTCCAAGGGGGGAACCTGCGGGCCCTGCGGGCAGTCTGTGTCTCATGCAGACTGTGGCAGATG
CGGCTGCCAGAAGGACCCCC

Downstream 100 bases:

>100_bases
TGGGGCATGCACGCCTTTCGGGCAGTACTCCCGCGCTGGCGGGTCGCGGCTGGGGCGCGCGCGTGTTGTTGCACCCGGCA
GCCAAGCCGGTGCTGTTTGT

Product: sulfite oxidase subunit yedy

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 332; Mature: 332

Protein sequence:

>332_residues
MLIPTRDNGYIHPCAGEITPRAVYEQRRAMLRLLAAGAGGAAMAGWAGRVALADQVRRPGRLAPLPGAPSAVPGAVTMEK
VTEYQDATTYNNFYEFGTDKSDPARNAHTLKTRPWTVEVEGLVNKPRRFDIDELLKLSAQEDRIYRLRCVEGWSMVIPWV
GYSLAELIKRVEPQGSAKYVEFVTLADKATMPYVGSHVLDWPYTEGLRLDEAMHPLTLLAFGMYGEVLPNQNGAPVRIVV
PWKYGFKSAKSIVKIRFVEKEPGTAWNKAARQEYGFYSNVNPDVDHPRWSQATERRIGEGGLFAKKRKTLLFNGYEAQVG
QLYAGMDLRKFY

Sequences:

>Translated_332_residues
MLIPTRDNGYIHPCAGEITPRAVYEQRRAMLRLLAAGAGGAAMAGWAGRVALADQVRRPGRLAPLPGAPSAVPGAVTMEK
VTEYQDATTYNNFYEFGTDKSDPARNAHTLKTRPWTVEVEGLVNKPRRFDIDELLKLSAQEDRIYRLRCVEGWSMVIPWV
GYSLAELIKRVEPQGSAKYVEFVTLADKATMPYVGSHVLDWPYTEGLRLDEAMHPLTLLAFGMYGEVLPNQNGAPVRIVV
PWKYGFKSAKSIVKIRFVEKEPGTAWNKAARQEYGFYSNVNPDVDHPRWSQATERRIGEGGLFAKKRKTLLFNGYEAQVG
QLYAGMDLRKFY
>Mature_332_residues
MLIPTRDNGYIHPCAGEITPRAVYEQRRAMLRLLAAGAGGAAMAGWAGRVALADQVRRPGRLAPLPGAPSAVPGAVTMEK
VTEYQDATTYNNFYEFGTDKSDPARNAHTLKTRPWTVEVEGLVNKPRRFDIDELLKLSAQEDRIYRLRCVEGWSMVIPWV
GYSLAELIKRVEPQGSAKYVEFVTLADKATMPYVGSHVLDWPYTEGLRLDEAMHPLTLLAFGMYGEVLPNQNGAPVRIVV
PWKYGFKSAKSIVKIRFVEKEPGTAWNKAARQEYGFYSNVNPDVDHPRWSQATERRIGEGGLFAKKRKTLLFNGYEAQVG
QLYAGMDLRKFY

Specific function: The exact function is not known. Can catalyze the reduction of a variety of substrates like dimethyl sulfoxide, trimethylamine N-oxide, phenylmethyl sulfoxide and L-methionine sulfoxide. Cannot reduce cyclic N-oxides. Shows no activity as sulfite oxidase

COG id: COG2041

COG function: function code R; Sulfite oxidase and related enzymes

Gene ontology:

Cell location: Periplasm. Note=Is attached to the inner membrane when interacting with the yedZ subunit (By similarity) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yedY family [H]

Homologues:

Organism=Escherichia coli, GI1788282, Length=258, Percent_Identity=57.3643410852713, Blast_Score=305, Evalue=3e-84,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000572
- InterPro:   IPR006311
- InterPro:   IPR022867 [H]

Pfam domain/function: PF00174 Oxidored_molyb [H]

EC number: NA

Molecular weight: Translated: 37276; Mature: 37276

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIPTRDNGYIHPCAGEITPRAVYEQRRAMLRLLAAGAGGAAMAGWAGRVALADQVRRPG
CCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCHHHHHHHCCCC
RLAPLPGAPSAVPGAVTMEKVTEYQDATTYNNFYEFGTDKSDPARNAHTLKTRPWTVEVE
CCCCCCCCCCCCCCCHHHHHHHHHHCCCHHCCHHHCCCCCCCCCCCCCEEECCCEEEEEC
GLVNKPRRFDIDELLKLSAQEDRIYRLRCVEGWSMVIPWVGYSLAELIKRVEPQGSAKYV
CCCCCCCCCCHHHHHHHCCCCCCEEEEEEECCCEEEHHHCCHHHHHHHHHHCCCCCCEEE
EFVTLADKATMPYVGSHVLDWPYTEGLRLDEAMHPLTLLAFGMYGEVLPNQNGAPVRIVV
EEEEECCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE
PWKYGFKSAKSIVKIRFVEKEPGTAWNKAARQEYGFYSNVNPDVDHPRWSQATERRIGEG
ECCCCCHHHCCEEEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCC
GLFAKKRKTLLFNGYEAQVGQLYAGMDLRKFY
CCCHHCCCEEEEECCHHHHHHHHHCCCHHHCC
>Mature Secondary Structure
MLIPTRDNGYIHPCAGEITPRAVYEQRRAMLRLLAAGAGGAAMAGWAGRVALADQVRRPG
CCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCHHHHHHHCCCC
RLAPLPGAPSAVPGAVTMEKVTEYQDATTYNNFYEFGTDKSDPARNAHTLKTRPWTVEVE
CCCCCCCCCCCCCCCHHHHHHHHHHCCCHHCCHHHCCCCCCCCCCCCCEEECCCEEEEEC
GLVNKPRRFDIDELLKLSAQEDRIYRLRCVEGWSMVIPWVGYSLAELIKRVEPQGSAKYV
CCCCCCCCCCHHHHHHHCCCCCCEEEEEEECCCEEEHHHCCHHHHHHHHHHCCCCCCEEE
EFVTLADKATMPYVGSHVLDWPYTEGLRLDEAMHPLTLLAFGMYGEVLPNQNGAPVRIVV
EEEEECCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE
PWKYGFKSAKSIVKIRFVEKEPGTAWNKAARQEYGFYSNVNPDVDHPRWSQATERRIGEG
ECCCCCHHHCCEEEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCC
GLFAKKRKTLLFNGYEAQVGQLYAGMDLRKFY
CCCHHCCCEEEEECCHHHHHHHHHCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Mo [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11823852 [H]