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The map label for this gene is omp32 [H]

Identifier: 222109878

GI number: 222109878

Start: 685258

End: 686451

Strand: Direct

Name: omp32 [H]

Synonym: Dtpsy_0662

Alternate gene names: 222109878

Gene position: 685258-686451 (Clockwise)

Preceding gene: 222109877

Following gene: 222109879

Centisome position: 18.05

GC content: 63.07

Gene sequence:

>1194_bases
ATGCAAAAGAAAATTGTGGCTGCCCTGGCGCTGTGCGGCGCGGGCGTGGCAATGGCCCAGTCCGCCGGTACCAGCAAGGT
GGAGCTGTGGGGTATCGTGGATGCCGCCGTGCGCCACACCAACAACGAAGGTGCCGGCAAGGATGGCCTGACGAAGATGA
TCGGTGGCGGCATGTCGCAAAGCCGCTGGGGCATCAATGTGGAGGAGGACCTGGGTGGCGGGTCCAAGGCCCTGGTGGTG
CTGGAAAACCGTCTCAATGCCGATGACGGCAGTGTTTCCACCCCCTTCTTCCAACTGTCCTATCTGGGTCTGCAAGGCCC
TTATGGCCGCCTGACTGCCGGACGTCAGTGGAATGTCCTGTTCGACGTGGTGACCAGCACCTACGCTTCGTTCCCGTACT
CCCCCTACATGGAAGCCTACAAGCCTGAGTTGGGAATGGCCATGGGCGCGCGTACCAGCAACATGCTGAAGTACACCTTC
GCAACGCCGGACCGCAGCTTCGTAGGCTCGCTGCAATATTCGTTTGACGAGAACAACGACACCAAGGCATTGGAAGCTGG
CCTGCCTGCCTCGGCGGCGCAAGTGCCTGCCTACGTTGCAGGCACCCTGGGTGGTGGCGCCTGGAAGACGGCTGGCGGCT
ACTTGCGCTACTCCGCGAGCGGGTTTGCCGTCGGCGGCGGCTACATGCGCACGACGCTGCCAGGCGGCACCGACGTAGAC
GCCTGGACTCTGGGCGGTTCGTACCGCACGGGTCCGTGGTACTTCAATACAGGCTATGGCCTGAACAAGGCGAAATACGC
TACGGTGACCAACCCGATCCAGGGTTTCCGTAATCTCGTCGACGGAGCGATCCTGGGGCAATTCTGGGCCGGCCAGACCA
ATGGCGGCTTCCAGCCGGGCGACGCCAACAAGCGCCAGCTGTTCAAGGTAGGTGTGGGCTATCAGTTGACGCCTCAGCTC
AACCTGGGCGCGCACTACTTCCGCGGTAAGCAGTCGGGCTCGGCCACGGGTGCTTCCAACGGCAACGTCAACTTCTACGT
GGCCGTGGCGGACTATGCCTTCAGCAAGCGCACCGATGCCTACTTCGGCGTGGACCACACCAGCATCAGCGGCGGCAGCG
CGCTCGTGCTGGATGCGGCGAGCGGCGCACGCAGCCGTACCGGCATCACCGTGGGTGTCCGCCATCGCTTCTAA

Upstream 100 bases:

>100_bases
TCGAGTGTTGTGAAGCGAGTGGCGCACGTCCAGTGAGCGAGTTCATCAAGGCGTGGCTGCGAATCGTGAGCCGGTTATCA
ATCCAAGAGGAGTCTGTCGT

Downstream 100 bases:

>100_bases
GGCACATTGAGTGGGGAGGGGAAGGGCCCTTTGGGCCCGCCCCGATTTCTAACAACCTCCTTCGGGAGGTTGTTTTTTTC
TGGAAGTACGGTTTTTGCCC

Product: porin

Products: NA

Alternate protein names: OMP32 [H]

Number of amino acids: Translated: 397; Mature: 397

Protein sequence:

>397_residues
MQKKIVAALALCGAGVAMAQSAGTSKVELWGIVDAAVRHTNNEGAGKDGLTKMIGGGMSQSRWGINVEEDLGGGSKALVV
LENRLNADDGSVSTPFFQLSYLGLQGPYGRLTAGRQWNVLFDVVTSTYASFPYSPYMEAYKPELGMAMGARTSNMLKYTF
ATPDRSFVGSLQYSFDENNDTKALEAGLPASAAQVPAYVAGTLGGGAWKTAGGYLRYSASGFAVGGGYMRTTLPGGTDVD
AWTLGGSYRTGPWYFNTGYGLNKAKYATVTNPIQGFRNLVDGAILGQFWAGQTNGGFQPGDANKRQLFKVGVGYQLTPQL
NLGAHYFRGKQSGSATGASNGNVNFYVAVADYAFSKRTDAYFGVDHTSISGGSALVLDAASGARSRTGITVGVRHRF

Sequences:

>Translated_397_residues
MQKKIVAALALCGAGVAMAQSAGTSKVELWGIVDAAVRHTNNEGAGKDGLTKMIGGGMSQSRWGINVEEDLGGGSKALVV
LENRLNADDGSVSTPFFQLSYLGLQGPYGRLTAGRQWNVLFDVVTSTYASFPYSPYMEAYKPELGMAMGARTSNMLKYTF
ATPDRSFVGSLQYSFDENNDTKALEAGLPASAAQVPAYVAGTLGGGAWKTAGGYLRYSASGFAVGGGYMRTTLPGGTDVD
AWTLGGSYRTGPWYFNTGYGLNKAKYATVTNPIQGFRNLVDGAILGQFWAGQTNGGFQPGDANKRQLFKVGVGYQLTPQL
NLGAHYFRGKQSGSATGASNGNVNFYVAVADYAFSKRTDAYFGVDHTSISGGSALVLDAASGARSRTGITVGVRHRF
>Mature_397_residues
MQKKIVAALALCGAGVAMAQSAGTSKVELWGIVDAAVRHTNNEGAGKDGLTKMIGGGMSQSRWGINVEEDLGGGSKALVV
LENRLNADDGSVSTPFFQLSYLGLQGPYGRLTAGRQWNVLFDVVTSTYASFPYSPYMEAYKPELGMAMGARTSNMLKYTF
ATPDRSFVGSLQYSFDENNDTKALEAGLPASAAQVPAYVAGTLGGGAWKTAGGYLRYSASGFAVGGGYMRTTLPGGTDVD
AWTLGGSYRTGPWYFNTGYGLNKAKYATVTNPIQGFRNLVDGAILGQFWAGQTNGGFQPGDANKRQLFKVGVGYQLTPQL
NLGAHYFRGKQSGSATGASNGNVNFYVAVADYAFSKRTDAYFGVDHTSISGGSALVLDAASGARSRTGITVGVRHRF

Specific function: Forms anion selective channels [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 41842; Mature: 41842

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKKIVAALALCGAGVAMAQSAGTSKVELWGIVDAAVRHTNNEGAGKDGLTKMIGGGMSQ
CCHHHHHHHHHHCCCHHHHHCCCCCEEEEEEEHHHHHHCCCCCCCCCCCHHHHHCCCCCC
SRWGINVEEDLGGGSKALVVLENRLNADDGSVSTPFFQLSYLGLQGPYGRLTAGRQWNVL
CCCCCCCHHHCCCCCEEEEEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCHHH
FDVVTSTYASFPYSPYMEAYKPELGMAMGARTSNMLKYTFATPDRSFVGSLQYSFDENND
HHHHHHHHHCCCCCCCHHHHCCCCCCEECCCCCCEEEEEEECCCCHHEEEEEEEECCCCC
TKALEAGLPASAAQVPAYVAGTLGGGAWKTAGGYLRYSASGFAVGGGYMRTTLPGGTDVD
CCHHHCCCCCCHHHCCEEEEECCCCCCEECCCCEEEEECCCEEECCCEEEEECCCCCCCC
AWTLGGSYRTGPWYFNTGYGLNKAKYATVTNPIQGFRNLVDGAILGQFWAGQTNGGFQPG
EEEECCCCCCCCEEEECCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
DANKRQLFKVGVGYQLTPQLNLGAHYFRGKQSGSATGASNGNVNFYVAVADYAFSKRTDA
CCCCCEEEEECCCEEECCCCCCCCCEECCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCC
YFGVDHTSISGGSALVLDAASGARSRTGITVGVRHRF
EECCCCCCCCCCCEEEEECCCCCCCCCCEEEEEEECC
>Mature Secondary Structure
MQKKIVAALALCGAGVAMAQSAGTSKVELWGIVDAAVRHTNNEGAGKDGLTKMIGGGMSQ
CCHHHHHHHHHHCCCHHHHHCCCCCEEEEEEEHHHHHHCCCCCCCCCCCHHHHHCCCCCC
SRWGINVEEDLGGGSKALVVLENRLNADDGSVSTPFFQLSYLGLQGPYGRLTAGRQWNVL
CCCCCCCHHHCCCCCEEEEEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCHHH
FDVVTSTYASFPYSPYMEAYKPELGMAMGARTSNMLKYTFATPDRSFVGSLQYSFDENND
HHHHHHHHHCCCCCCCHHHHCCCCCCEECCCCCCEEEEEEECCCCHHEEEEEEEECCCCC
TKALEAGLPASAAQVPAYVAGTLGGGAWKTAGGYLRYSASGFAVGGGYMRTTLPGGTDVD
CCHHHCCCCCCHHHCCEEEEECCCCCCEECCCCEEEEECCCEEECCCEEEEECCCCCCCC
AWTLGGSYRTGPWYFNTGYGLNKAKYATVTNPIQGFRNLVDGAILGQFWAGQTNGGFQPG
EEEECCCCCCCCEEEECCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
DANKRQLFKVGVGYQLTPQLNLGAHYFRGKQSGSATGASNGNVNFYVAVADYAFSKRTDA
CCCCCEEEEECCCEEECCCCCCCCCEECCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCC
YFGVDHTSISGGSALVLDAASGARSRTGITVGVRHRF
EECCCCCCCCCCCEEEEECCCCCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1848840 [H]