| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is erpA
Identifier: 222109824
GI number: 222109824
Start: 627285
End: 627659
Strand: Direct
Name: erpA
Synonym: Dtpsy_0608
Alternate gene names: 222109824
Gene position: 627285-627659 (Clockwise)
Preceding gene: 222109823
Following gene: 222109827
Centisome position: 16.52
GC content: 58.13
Gene sequence:
>375_bases ATGAGCGCCGTTGCCGAGAACACCACGACCGAGATGCCCGCCCCCATCCTTTTCACCGACAGCGCCGCCGCCAAGGTGGC CGAGCTGATTGCCGAAGAAGGCAATCCTGACCTCAAGCTGCGGGTCTTCGTGCAGGGCGGGGGATGCTCGGGCTTCCAGT ATGGTTTCACATTTGATGAAATCACGAACGAAGACGACACCACCATGACCAAGAACGGTGTGTCACTGCTCATCGATGCC ATGAGCTACCAATACTTGGTGGGTGCAGAGATCGACTACAAGGAAGACCTGCAGGGTGCGCAGTTCGTCATCAAGAACCC GAATGCCGCTTCGACATGCGGCTGCGGCTCCAGCTTCTCCGTGGAAGACCACTGA
Upstream 100 bases:
>100_bases AGAAAAGCCCACACTGAAACTGGCGTCAAACGCACAGTGAACGGAGCGCTGGGGGGCTATGCCTTACCATCGAAACAAAG ACTGACCCAAGGAGCCCTTC
Downstream 100 bases:
>100_bases CGCACAGCCCATGAGAATCCGCCGCCTACGGGCGGCTTTTTTATGGCTGCGTGGCAGGTTGCTCAGGCGGGGTAGATGGC GCCGAGGATGCGCTCCCCGC
Product: iron-sulfur cluster insertion protein erpa
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 124; Mature: 123
Protein sequence:
>124_residues MSAVAENTTTEMPAPILFTDSAAAKVAELIAEEGNPDLKLRVFVQGGGCSGFQYGFTFDEITNEDDTTMTKNGVSLLIDA MSYQYLVGAEIDYKEDLQGAQFVIKNPNAASTCGCGSSFSVEDH
Sequences:
>Translated_124_residues MSAVAENTTTEMPAPILFTDSAAAKVAELIAEEGNPDLKLRVFVQGGGCSGFQYGFTFDEITNEDDTTMTKNGVSLLIDA MSYQYLVGAEIDYKEDLQGAQFVIKNPNAASTCGCGSSFSVEDH >Mature_123_residues SAVAENTTTEMPAPILFTDSAAAKVAELIAEEGNPDLKLRVFVQGGGCSGFQYGFTFDEITNEDDTTMTKNGVSLLIDAM SYQYLVGAEIDYKEDLQGAQFVIKNPNAASTCGCGSSFSVEDH
Specific function: Required for insertion of 4Fe-4S clusters (Potential)
COG id: COG0316
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hesB/iscA family
Homologues:
Organism=Homo sapiens, GI160420328, Length=108, Percent_Identity=39.8148148148148, Blast_Score=88, Evalue=2e-18, Organism=Homo sapiens, GI52426768, Length=122, Percent_Identity=31.1475409836066, Blast_Score=76, Evalue=8e-15, Organism=Escherichia coli, GI1786351, Length=111, Percent_Identity=62.1621621621622, Blast_Score=155, Evalue=1e-39, Organism=Escherichia coli, GI1788877, Length=106, Percent_Identity=35.8490566037736, Blast_Score=70, Evalue=3e-14, Organism=Caenorhabditis elegans, GI71998452, Length=108, Percent_Identity=38.8888888888889, Blast_Score=80, Evalue=2e-16, Organism=Caenorhabditis elegans, GI193209025, Length=112, Percent_Identity=30.3571428571429, Blast_Score=74, Evalue=2e-14, Organism=Caenorhabditis elegans, GI25146411, Length=111, Percent_Identity=29.7297297297297, Blast_Score=73, Evalue=3e-14, Organism=Saccharomyces cerevisiae, GI6323001, Length=106, Percent_Identity=36.7924528301887, Blast_Score=72, Evalue=2e-14, Organism=Drosophila melanogaster, GI24649697, Length=84, Percent_Identity=47.6190476190476, Blast_Score=81, Evalue=2e-16, Organism=Drosophila melanogaster, GI24642263, Length=122, Percent_Identity=31.1475409836066, Blast_Score=70, Evalue=4e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ERPA_ACISJ (A1W3Q0)
Other databases:
- EMBL: CP000539 - RefSeq: YP_984951.1 - ProteinModelPortal: A1W3Q0 - SMR: A1W3Q0 - STRING: A1W3Q0 - GeneID: 4674259 - GenomeReviews: CP000539_GR - KEGG: ajs:Ajs_0629 - eggNOG: COG0316 - HOGENOM: HBG730174 - OMA: TFDDQIN - PhylomeDB: A1W3Q0 - ProtClustDB: PRK13623 - BioCyc: ASP232721:AJS_0629-MONOMER - HAMAP: MF_01380 - InterPro: IPR000361 - InterPro: IPR016092 - InterPro: IPR017870 - InterPro: IPR023063 - Gene3D: G3DSA:2.60.300.12 - PANTHER: PTHR10072 - TIGRFAMs: TIGR00049
Pfam domain/function: PF01521 Fe-S_biosyn; SSF89360 HesB_yadR_yfhF-like
EC number: NA
Molecular weight: Translated: 13234; Mature: 13103
Theoretical pI: Translated: 3.81; Mature: 3.81
Prosite motif: PS01152 HESB
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAVAENTTTEMPAPILFTDSAAAKVAELIAEEGNPDLKLRVFVQGGGCSGFQYGFTFDE CCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCHHH ITNEDDTTMTKNGVSLLIDAMSYQYLVGAEIDYKEDLQGAQFVIKNPNAASTCGCGSSFS HCCCCCCEEECCCCEEEEECCCCEEEECCCCCCHHCCCCCEEEEECCCCCCCCCCCCCCC VEDH CCCC >Mature Secondary Structure SAVAENTTTEMPAPILFTDSAAAKVAELIAEEGNPDLKLRVFVQGGGCSGFQYGFTFDE CCCCCCCCCCCCCCEEEECCHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCHHH ITNEDDTTMTKNGVSLLIDAMSYQYLVGAEIDYKEDLQGAQFVIKNPNAASTCGCGSSFS HCCCCCCEEECCCCEEEEECCCCEEEECCCCCCHHCCCCCEEEEECCCCCCCCCCCCCCC VEDH CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA