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The map label for this gene is asnC [C]

Identifier: 222109809

GI number: 222109809

Start: 613108

End: 613539

Strand: Direct

Name: asnC [C]

Synonym: Dtpsy_0593

Alternate gene names: 222109809

Gene position: 613108-613539 (Clockwise)

Preceding gene: 222109807

Following gene: 222109813

Centisome position: 16.15

GC content: 68.75

Gene sequence:

>432_bases
ATGCGCAACATGGACGACGTCGACCGCGAGATCATTGCGCTGCTGCGTGCGGATGCCCGCATGCCGGTGGCGGCGCTCGC
CGTACGTCTGCGCGTGGCCCGCGGCACCGTTCAGAACCGCCTGCGCCGGCTGGAGGAAGAGGGCGTCATCGTCGGCTACA
CCGTGCGGCTGCGCCCCGAGTCGGAGCCCCACCGGATCCGCGCCTGGATGAGCATTGCAGTGCAAGGGAACGCGGCGCCT
GACGTGATTCGCGCCCTGCGTGGAGAGCCGCTGGTCGGCGCGCTGCACAGTACCAACGGCCGCTGGGACATCGTGGCCGA
GCTGCATGCGCAGAGCCTGGAGGAATTCGACCTGGCGCTCACGCGCATTCGGCTCACGCCGGGCATCGCGCGCACCGAAA
CCAGCATCCTGCTGTCCACGTACAAGCTGTGA

Upstream 100 bases:

>100_bases
ACGTGTTTCCCCATTGTGGACAGGCCCTGCGCTTGCGGCCAGCCTACAAACTGCTCAATAAGCGCGGAAAACTGGCGTTT
CGCCAGCAACCCGTGGCACT

Downstream 100 bases:

>100_bases
TCGTCCCGCCCGAGCGGGCAGTGCTTCACTGCATCGACGAGACGTACGCCACCAGCGACTCGATGTCGGCGTCCGTGAGG
AGCTTGGTGTTGGGCGTCAT

Product: AsnC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MRNMDDVDREIIALLRADARMPVAALAVRLRVARGTVQNRLRRLEEEGVIVGYTVRLRPESEPHRIRAWMSIAVQGNAAP
DVIRALRGEPLVGALHSTNGRWDIVAELHAQSLEEFDLALTRIRLTPGIARTETSILLSTYKL

Sequences:

>Translated_143_residues
MRNMDDVDREIIALLRADARMPVAALAVRLRVARGTVQNRLRRLEEEGVIVGYTVRLRPESEPHRIRAWMSIAVQGNAAP
DVIRALRGEPLVGALHSTNGRWDIVAELHAQSLEEFDLALTRIRLTPGIARTETSILLSTYKL
>Mature_143_residues
MRNMDDVDREIIALLRADARMPVAALAVRLRVARGTVQNRLRRLEEEGVIVGYTVRLRPESEPHRIRAWMSIAVQGNAAP
DVIRALRGEPLVGALHSTNGRWDIVAELHAQSLEEFDLALTRIRLTPGIARTETSILLSTYKL

Specific function: Activator Of Asna Transcription; Autogenous Regulator Of Its Own Transcription; And Repressor Of The Expression Of Gida At A Post-Transcriptional Level. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR013196
- InterPro:   IPR000485
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg; PF08279 HTH_11 [H]

EC number: NA

Molecular weight: Translated: 16056; Mature: 16056

Theoretical pI: Translated: 10.53; Mature: 10.53

Prosite motif: PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNMDDVDREIIALLRADARMPVAALAVRLRVARGTVQNRLRRLEEEGVIVGYTVRLRPE
CCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCC
SEPHRIRAWMSIAVQGNAAPDVIRALRGEPLVGALHSTNGRWDIVAELHAQSLEEFDLAL
CCCHHEEEEEEEEECCCCCHHHHHHHCCCCCEEEEECCCCCEEEHHHHHHHHHHHHHHHH
TRIRLTPGIARTETSILLSTYKL
HHEEECCCCCHHHHHHEEEEECC
>Mature Secondary Structure
MRNMDDVDREIIALLRADARMPVAALAVRLRVARGTVQNRLRRLEEEGVIVGYTVRLRPE
CCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCC
SEPHRIRAWMSIAVQGNAAPDVIRALRGEPLVGALHSTNGRWDIVAELHAQSLEEFDLAL
CCCHHEEEEEEEEECCCCCHHHHHHHCCCCCEEEEECCCCCEEEHHHHHHHHHHHHHHHH
TRIRLTPGIARTETSILLSTYKL
HHEEECCCCCHHHHHHEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA