| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is 222109764
Identifier: 222109764
GI number: 222109764
Start: 567643
End: 568092
Strand: Direct
Name: 222109764
Synonym: Dtpsy_0548
Alternate gene names: NA
Gene position: 567643-568092 (Clockwise)
Preceding gene: 222109763
Following gene: 222109766
Centisome position: 14.95
GC content: 73.56
Gene sequence:
>450_bases ATGGCCGCCATGAACACACCCACGCCCGACCTCCACGCTTCTGAGCAACCTCTGCCCGCCGAGGGCTACGCCGGCGACGT GAGCCCGCCGCTGGCGTGGCAATGGGTGCGCGCCGGCCAGGCGGTGCTGGTGGACGTGCGCACCGATGCCGAGCGCGACT GGGTGGGCTTCGTGCCCGGCGCCGTGGCCGCGGCCTGGAAGCAATGGCCCGGCATGCAACCCAATGCCGATTTCGACGCA CAGCTGCGCGCGGCAGTGCCGCCCGGCGGCACGGCGGTGCTGCTGTGCCGCAGCGGCGTGCGCTCGGTGGCCGCGGCGCG GCGCGCGACCGAGCTGGGCATCAAGGCCTACAACATCCTGGAAGGCTTCGAGGGTGAGCCGGACGAGAACGGCCAGCGCA ACCGGCGCAGCGGCTGGCGCTTTCGCGGCCTGCCGTGGCGGCAGGGCTGA
Upstream 100 bases:
>100_bases CCACCGTGGTGCCCGACTACGCCGCGCTGCGCCGCAGCCTGCGCGAGCAGCCCGCGCCGCCCTGGGACTGATGGGCGCGC GGCGGCCATGGTCTGCCAGA
Downstream 100 bases:
>100_bases GCGGGTTGCCTGCCATTTGTGACGCTCTCAAAAAAATAGCTGCCAGCGCATGATGTGCAAGCGCTGGCAGCCGTTTTGGC TTGAGATTGACGGGGCTTAC
Product: rhodanese domain-containing protein
Products: NA
Alternate protein names: Rhodanese Domain Protein; Rhodanese-Like Protein; Rhodanese-Related Sulfurtransferase; Sulfide Dehydrogenase; Rhodanese-Like Domain Protein; Sulfurtransferase Protein; Rhodanese/Cdc25 Fold; Rhodanese-Like Domain-Containing Protein; Sulfate Permease Andrelated Transporter; Rhodanese-Like Sulfurtransferase
Number of amino acids: Translated: 149; Mature: 148
Protein sequence:
>149_residues MAAMNTPTPDLHASEQPLPAEGYAGDVSPPLAWQWVRAGQAVLVDVRTDAERDWVGFVPGAVAAAWKQWPGMQPNADFDA QLRAAVPPGGTAVLLCRSGVRSVAAARRATELGIKAYNILEGFEGEPDENGQRNRRSGWRFRGLPWRQG
Sequences:
>Translated_149_residues MAAMNTPTPDLHASEQPLPAEGYAGDVSPPLAWQWVRAGQAVLVDVRTDAERDWVGFVPGAVAAAWKQWPGMQPNADFDA QLRAAVPPGGTAVLLCRSGVRSVAAARRATELGIKAYNILEGFEGEPDENGQRNRRSGWRFRGLPWRQG >Mature_148_residues AAMNTPTPDLHASEQPLPAEGYAGDVSPPLAWQWVRAGQAVLVDVRTDAERDWVGFVPGAVAAAWKQWPGMQPNADFDAQ LRAAVPPGGTAVLLCRSGVRSVAAARRATELGIKAYNILEGFEGEPDENGQRNRRSGWRFRGLPWRQG
Specific function: Unknown
COG id: COG0607
COG function: function code P; Rhodanese-related sulfurtransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16161; Mature: 16030
Theoretical pI: Translated: 7.37; Mature: 7.37
Prosite motif: PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAMNTPTPDLHASEQPLPAEGYAGDVSPPLAWQWVRAGQAVLVDVRTDAERDWVGFVPG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEEEECCCCCCCCCCCCCH AVAAAWKQWPGMQPNADFDAQLRAAVPPGGTAVLLCRSGVRSVAAARRATELGIKAYNIL HHHHHHHHCCCCCCCCCCCCEEEEECCCCCCEEEEEHHHHHHHHHHHHHHHHCCHHHHHH EGFEGEPDENGQRNRRSGWRFRGLPWRQG HCCCCCCCCCCCCCCCCCCEECCCCCCCC >Mature Secondary Structure AAMNTPTPDLHASEQPLPAEGYAGDVSPPLAWQWVRAGQAVLVDVRTDAERDWVGFVPG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEEEECCCCCCCCCCCCCH AVAAAWKQWPGMQPNADFDAQLRAAVPPGGTAVLLCRSGVRSVAAARRATELGIKAYNIL HHHHHHHHCCCCCCCCCCCCEEEEECCCCCCEEEEEHHHHHHHHHHHHHHHHCCHHHHHH EGFEGEPDENGQRNRRSGWRFRGLPWRQG HCCCCCCCCCCCCCCCCCCEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA