| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is coaX
Identifier: 222109766
GI number: 222109766
Start: 568834
End: 569610
Strand: Direct
Name: coaX
Synonym: Dtpsy_0550
Alternate gene names: 222109766
Gene position: 568834-569610 (Clockwise)
Preceding gene: 222109764
Following gene: 222109769
Centisome position: 14.98
GC content: 70.4
Gene sequence:
>777_bases ATGACTTTCCTGGCCATCGACGTGGGCAACACCCGTCTCAAGTGGGCGTTGTTCGACGCAGCGCAGCCCGGTGCCGGCCT GCTGGCCCATGGCGCTGAATTCCTGGACCATATCGAACGCCTGGCCGAGGGCCCGTGGTCCCACCTGCCTGCGCCCCGGC ATATGCTGGGTTGCGTGGTGGCGGGCGACGCGGTCAAGCGCCGCGTGGCCGAGCAGATGGAGCTGTGGGACGTGCCCGCG CGCTGGGTGGTGCCGTCCGCGCAGGAAGCCGGCGTCATCAACGGCTACGACCATCCCACCCGCCTGGGCGCGGACCGCTG GGTGGCCATGATCGGTGCGCGCCACCGCCTGCTGGCCCAGGGGCCCGCGCGGCCGCTGATCGTGGTGATGGTGGGCACCG CCGTGACGGTGGAGGCCCTGGACGCGGAGGGTCGCTTCCTGGGCGGCCTGATCCTGCCCGGCCACGGCATCATGCTGCGC GCACTGGAGTCAGGCACCGCGGGGCTGCACGTGCCCACAGGCGAGGTGCGCCTGTTCCCATCCAACACCAGCGATGCGCT GACCAGCGGCGGCACCTATGCCATTGCCGGCGCGGTGGAGCGCATGTACCAGCACCTGCGGCAGCACTGCGGGCAGGAAC CCGCCTGCATGATGACCGGCGGTGCGGGCTGGAAGATGGCGCCAAGCATGACGCGCCCGTTCGAGTTGGTGGAAAACCTG ATCTTTGACGGCCTGCTGGAGATCGCGGCGCGCCGGTTTGCCGAGCTGCCGGCCTGA
Upstream 100 bases:
>100_bases GTCCGGCACCGCCATGTCGGAAAAACGCCCGCGCCGGCGGCAGCGCGTGCATTTGCGGCGCTCTGCGGGAGGCAAAGGCA AAAAACGGATAATCCGCGCC
Downstream 100 bases:
>100_bases CACGGCCCGCCAGCGCGGGTGTTAAGCGGCCTGGTCGTAGGCCCCGACCAGCCGCGCCAGGTGCGCACGCTGGGTGGGCT CCAGGTAGGGCATGAGCAGC
Product: pantothenate kinase
Products: NA
Alternate protein names: PanK-III; Pantothenic acid kinase
Number of amino acids: Translated: 258; Mature: 257
Protein sequence:
>258_residues MTFLAIDVGNTRLKWALFDAAQPGAGLLAHGAEFLDHIERLAEGPWSHLPAPRHMLGCVVAGDAVKRRVAEQMELWDVPA RWVVPSAQEAGVINGYDHPTRLGADRWVAMIGARHRLLAQGPARPLIVVMVGTAVTVEALDAEGRFLGGLILPGHGIMLR ALESGTAGLHVPTGEVRLFPSNTSDALTSGGTYAIAGAVERMYQHLRQHCGQEPACMMTGGAGWKMAPSMTRPFELVENL IFDGLLEIAARRFAELPA
Sequences:
>Translated_258_residues MTFLAIDVGNTRLKWALFDAAQPGAGLLAHGAEFLDHIERLAEGPWSHLPAPRHMLGCVVAGDAVKRRVAEQMELWDVPA RWVVPSAQEAGVINGYDHPTRLGADRWVAMIGARHRLLAQGPARPLIVVMVGTAVTVEALDAEGRFLGGLILPGHGIMLR ALESGTAGLHVPTGEVRLFPSNTSDALTSGGTYAIAGAVERMYQHLRQHCGQEPACMMTGGAGWKMAPSMTRPFELVENL IFDGLLEIAARRFAELPA >Mature_257_residues TFLAIDVGNTRLKWALFDAAQPGAGLLAHGAEFLDHIERLAEGPWSHLPAPRHMLGCVVAGDAVKRRVAEQMELWDVPAR WVVPSAQEAGVINGYDHPTRLGADRWVAMIGARHRLLAQGPARPLIVVMVGTAVTVEALDAEGRFLGGLILPGHGIMLRA LESGTAGLHVPTGEVRLFPSNTSDALTSGGTYAIAGAVERMYQHLRQHCGQEPACMMTGGAGWKMAPSMTRPFELVENLI FDGLLEIAARRFAELPA
Specific function: Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
COG id: COG1521
COG function: function code K; Putative transcriptional regulator, homolog of Bvg accessory factor
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the type III pantothenate kinase family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): COAX_ACIET (B9MCN0)
Other databases:
- EMBL: CP001392 - RefSeq: YP_002552030.1 - ProteinModelPortal: B9MCN0 - SMR: B9MCN0 - GeneID: 7382841 - GenomeReviews: CP001392_GR - KEGG: dia:Dtpsy_0550 - ProtClustDB: PRK13329 - GO: GO:0005737 - HAMAP: MF_01274 - InterPro: IPR004619 - TIGRFAMs: TIGR00671
Pfam domain/function: PF03309 Bvg_acc_factor
EC number: =2.7.1.33
Molecular weight: Translated: 27735; Mature: 27604
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: ACT_SITE 105-105 BINDING 96-96 BINDING 133-133 BINDING 183-183
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFLAIDVGNTRLKWALFDAAQPGAGLLAHGAEFLDHIERLAEGPWSHLPAPRHMLGCVV CEEEEEECCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH AGDAVKRRVAEQMELWDVPARWVVPSAQEAGVINGYDHPTRLGADRWVAMIGARHRLLAQ HHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHC GPARPLIVVMVGTAVTVEALDAEGRFLGGLILPGHGIMLRALESGTAGLHVPTGEVRLFP CCCCCEEEEEECCEEEEEEECCCCCEECEEEECCCCEEEEEECCCCCCEEECCCCEEEEE SNTSDALTSGGTYAIAGAVERMYQHLRQHCGQEPACMMTGGAGWKMAPSMTRPFELVENL CCCCHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCHHHHHHHH IFDGLLEIAARRFAELPA HHHHHHHHHHHHHHCCCC >Mature Secondary Structure TFLAIDVGNTRLKWALFDAAQPGAGLLAHGAEFLDHIERLAEGPWSHLPAPRHMLGCVV EEEEEECCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH AGDAVKRRVAEQMELWDVPARWVVPSAQEAGVINGYDHPTRLGADRWVAMIGARHRLLAQ HHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHC GPARPLIVVMVGTAVTVEALDAEGRFLGGLILPGHGIMLRALESGTAGLHVPTGEVRLFP CCCCCEEEEEECCEEEEEEECCCCCEECEEEECCCCEEEEEECCCCCCEEECCCCEEEEE SNTSDALTSGGTYAIAGAVERMYQHLRQHCGQEPACMMTGGAGWKMAPSMTRPFELVENL CCCCHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCHHHHHHHH IFDGLLEIAARRFAELPA HHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA