| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is 222109749
Identifier: 222109749
GI number: 222109749
Start: 551853
End: 552764
Strand: Direct
Name: 222109749
Synonym: Dtpsy_0533
Alternate gene names: NA
Gene position: 551853-552764 (Clockwise)
Preceding gene: 222109741
Following gene: 222109753
Centisome position: 14.54
GC content: 72.26
Gene sequence:
>912_bases ATGACGAACGCGCGTTGGCAACGCTGGGCGGTGGCCGTGCATCTGCTGTTGATCGCGGGCTGGATGGCTTGGTTCTGGGG CCGTTCGCCGGCGCTGGCGCTGGCGGGCGTGGCCGCGGTCCCGCTGATGTTCCGCCTGGGCATGGCGCCGCAATTTTTCT TGATGGCCTGGGTTTGCCGGGGGGATGCGACGCCGCGTCCGCGCGCCGGGCAGCTGCTGCGTGCCTGGTGGGCCGAGTCA CGCTGGGCCAGCCTGGTCTTCGGTTGGTGGCAGCCGTTCCGCCACCAGGCCGTGGCGGACTGGCTGCCACCGCGCGCGTC GGACGTGCCCGGCCCGCGCGGCGTGGTGCTGGTGCATGGCTTCCTGTGCAACCGAGGGTTCTGGACGCCCTGGCTGGCGC TGCTGCGTGCGCGCGGCCATGCCTTCGTGGCCGTGACCCTGGAGCCCGCCTTCGGCTCCATCGACGATTACTGCCGCACC ATCGACGATGCCGTGCGCCGCGTGGCCGAGGCCACTGGGCGGGCGCCGCTGATCGTGGGCCACAGCATGGGCGGTCTGGC CGCACGCGCCTGGCTGCGCGCCGTGCCGGGCAGCGAGCAGCGCGTGCACCGCATCGTCACGCTGGGATCGCCGCACCACG GCACCTGGCCCGCGCGCGGCGCACGCAGCACCAATGGCCGGCAGATGAGGTTGCACGGCCCCTGGGTGCGCCAGTTGGGG CAAGACGAGCCGCCGGCACGCGCCGCAGTCTTCGTGTGCTGGTACTCCAACTGCGACAACGTGGTCTATCCGCCCGCGGC CGCAATGCTGCAGGGCGCGGACAACCGCTTCATCGAGGGGGTGGCGCACGTCGAGATGGCGTTCCACCCGCGCGTGCTGC AGGACTGCCTGGCGCTGCTCGAGCAGCCCTGA
Upstream 100 bases:
>100_bases TTGTGGAAGTGGCCTTGCACGCGCCATACCGGGCTTGTCCTAGTCCGGATGCCGCAGAGGTCACCCAAGCGACACACCAC AACCACCACAAGGGAGCTTC
Downstream 100 bases:
>100_bases GCGTGTCGGCGACGCGCTTCAGGCCGGGAGCGGCTCGCGCGCATCGGCCGCGAACTCGGGCTGGCCGCGCAGCCGTTCGT AGATCGGCGCGAAATCCTGC
Product: pgap1 family protein
Products: NA
Alternate protein names: Lipase Transmembrane Protein; PGAP1 Family Protein; Secreted Lipase; Alpha/Beta Hydrolase Fold Protein; Alpha/Beta Hydrolase Fold-Like Protein; LIPASE/Acetyltransferase TRANSMEMBRANE PROTEIN; Pgap1 Family Protein; PGAP1-Like Protein
Number of amino acids: Translated: 303; Mature: 302
Protein sequence:
>303_residues MTNARWQRWAVAVHLLLIAGWMAWFWGRSPALALAGVAAVPLMFRLGMAPQFFLMAWVCRGDATPRPRAGQLLRAWWAES RWASLVFGWWQPFRHQAVADWLPPRASDVPGPRGVVLVHGFLCNRGFWTPWLALLRARGHAFVAVTLEPAFGSIDDYCRT IDDAVRRVAEATGRAPLIVGHSMGGLAARAWLRAVPGSEQRVHRIVTLGSPHHGTWPARGARSTNGRQMRLHGPWVRQLG QDEPPARAAVFVCWYSNCDNVVYPPAAAMLQGADNRFIEGVAHVEMAFHPRVLQDCLALLEQP
Sequences:
>Translated_303_residues MTNARWQRWAVAVHLLLIAGWMAWFWGRSPALALAGVAAVPLMFRLGMAPQFFLMAWVCRGDATPRPRAGQLLRAWWAES RWASLVFGWWQPFRHQAVADWLPPRASDVPGPRGVVLVHGFLCNRGFWTPWLALLRARGHAFVAVTLEPAFGSIDDYCRT IDDAVRRVAEATGRAPLIVGHSMGGLAARAWLRAVPGSEQRVHRIVTLGSPHHGTWPARGARSTNGRQMRLHGPWVRQLG QDEPPARAAVFVCWYSNCDNVVYPPAAAMLQGADNRFIEGVAHVEMAFHPRVLQDCLALLEQP >Mature_302_residues TNARWQRWAVAVHLLLIAGWMAWFWGRSPALALAGVAAVPLMFRLGMAPQFFLMAWVCRGDATPRPRAGQLLRAWWAESR WASLVFGWWQPFRHQAVADWLPPRASDVPGPRGVVLVHGFLCNRGFWTPWLALLRARGHAFVAVTLEPAFGSIDDYCRTI DDAVRRVAEATGRAPLIVGHSMGGLAARAWLRAVPGSEQRVHRIVTLGSPHHGTWPARGARSTNGRQMRLHGPWVRQLGQ DEPPARAAVFVCWYSNCDNVVYPPAAAMLQGADNRFIEGVAHVEMAFHPRVLQDCLALLEQP
Specific function: Unknown
COG id: COG1075
COG function: function code R; Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33777; Mature: 33646
Theoretical pI: Translated: 11.37; Mature: 11.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNARWQRWAVAVHLLLIAGWMAWFWGRSPALALAGVAAVPLMFRLGMAPQFFLMAWVCR CCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHC GDATPRPRAGQLLRAWWAESRWASLVFGWWQPFRHQAVADWLPPRASDVPGPRGVVLVHG CCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEE FLCNRGFWTPWLALLRARGHAFVAVTLEPAFGSIDDYCRTIDDAVRRVAEATGRAPLIVG HHHCCCCHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEE HSMGGLAARAWLRAVPGSEQRVHRIVTLGSPHHGTWPARGARSTNGRQMRLHGPWVRQLG CCCCHHHHHHHHHCCCCCHHHEEEEEEECCCCCCCCCCCCCCCCCCCEEEECCHHHHHCC QDEPPARAAVFVCWYSNCDNVVYPPAAAMLQGADNRFIEGVAHVEMAFHPRVLQDCLALL CCCCCCCEEEEEEEECCCCCEEECCHHHHHCCCCHHHHHHHHHHHHHHCHHHHHHHHHHH EQP CCC >Mature Secondary Structure TNARWQRWAVAVHLLLIAGWMAWFWGRSPALALAGVAAVPLMFRLGMAPQFFLMAWVCR CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHC GDATPRPRAGQLLRAWWAESRWASLVFGWWQPFRHQAVADWLPPRASDVPGPRGVVLVHG CCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEE FLCNRGFWTPWLALLRARGHAFVAVTLEPAFGSIDDYCRTIDDAVRRVAEATGRAPLIVG HHHCCCCHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEE HSMGGLAARAWLRAVPGSEQRVHRIVTLGSPHHGTWPARGARSTNGRQMRLHGPWVRQLG CCCCHHHHHHHHHCCCCCHHHEEEEEEECCCCCCCCCCCCCCCCCCCEEEECCHHHHHCC QDEPPARAAVFVCWYSNCDNVVYPPAAAMLQGADNRFIEGVAHVEMAFHPRVLQDCLALL CCCCCCCEEEEEEEECCCCCEEECCHHHHHCCCCHHHHHHHHHHHHHHCHHHHHHHHHHH EQP CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA