| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is 222109656
Identifier: 222109656
GI number: 222109656
Start: 448008
End: 448553
Strand: Direct
Name: 222109656
Synonym: Dtpsy_0436
Alternate gene names: NA
Gene position: 448008-448553 (Clockwise)
Preceding gene: 222109655
Following gene: 222109660
Centisome position: 11.8
GC content: 71.25
Gene sequence:
>546_bases ATGGCCAGCCGTGTGTCCCTGCCCGGTCTGCACACGCCAGGCGCGGGCTTTGACGAGCCGTTCGAGATGCTGGGCGCCTG CCATGACCGCGTTCGCCGCTCGCTGGACCTGCTGCAGCGCCTGCGCGACTACCTCAAAGCGCACGCCTGCGATGACTCCG CCCGCCAGGCGGCGCGCGACGTGCTGCGCTATTTCGACATCGCCGCCCCGCTGCACCACGAGGACGAGGAACTCCACGTC TTCCCGCCCCTGCTGGCCGGTGGCGACGCCGCGCTGACGGACCTGGTGCGCCAGCTGCAGCGGGACCATGTGCTGATGGC CGAACGCTGGGCTGCCGCGCGCGTGGGGTTGCAGGCGCTGGCCGACGGGGCCGTGCAGGCGTTCACGCCGCAGCACGAGA CGGCCTTGGACCGGTTTGCGCAGTGCTACGACGATCACCTGCGCCATGAAGACGACCGCATCTATCCCGCCGCGCGCGCG CTGCTGGACGACCCCGCACAGCAGTCCATGGGGCAGGAGATGGCGCGTCGCCGCGGCGTGCGTTGA
Upstream 100 bases:
>100_bases AAGGTGCTGCGCCGCATGGTGGAGGCCGTGAAAACGGGCGCTTTCAGCGCCTATCTGCCCTTCAACCGCGACGGCCAGCC CGTGCGGCTGGGCTGACGCC
Downstream 100 bases:
>100_bases TTGCTATTGAAATATGAGCTACTACCGCTTGATGGATAAGCGCTAGAGCCATTTTTCATCTGGATCGGACGGGCGGCTGC GCGCCGCTGTTCGTCAGCGG
Product: hemerythrin hhe cation-binding domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 181; Mature: 180
Protein sequence:
>181_residues MASRVSLPGLHTPGAGFDEPFEMLGACHDRVRRSLDLLQRLRDYLKAHACDDSARQAARDVLRYFDIAAPLHHEDEELHV FPPLLAGGDAALTDLVRQLQRDHVLMAERWAAARVGLQALADGAVQAFTPQHETALDRFAQCYDDHLRHEDDRIYPAARA LLDDPAQQSMGQEMARRRGVR
Sequences:
>Translated_181_residues MASRVSLPGLHTPGAGFDEPFEMLGACHDRVRRSLDLLQRLRDYLKAHACDDSARQAARDVLRYFDIAAPLHHEDEELHV FPPLLAGGDAALTDLVRQLQRDHVLMAERWAAARVGLQALADGAVQAFTPQHETALDRFAQCYDDHLRHEDDRIYPAARA LLDDPAQQSMGQEMARRRGVR >Mature_180_residues ASRVSLPGLHTPGAGFDEPFEMLGACHDRVRRSLDLLQRLRDYLKAHACDDSARQAARDVLRYFDIAAPLHHEDEELHVF PPLLAGGDAALTDLVRQLQRDHVLMAERWAAARVGLQALADGAVQAFTPQHETALDRFAQCYDDHLRHEDDRIYPAARAL LDDPAQQSMGQEMARRRGVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012312 [H]
Pfam domain/function: PF01814 Hemerythrin [H]
EC number: NA
Molecular weight: Translated: 20354; Mature: 20223
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASRVSLPGLHTPGAGFDEPFEMLGACHDRVRRSLDLLQRLRDYLKAHACDDSARQAARD CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH VLRYFDIAAPLHHEDEELHVFPPLLAGGDAALTDLVRQLQRDHVLMAERWAAARVGLQAL HHHHHHHHCCCCCCCCCEEECCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ADGAVQAFTPQHETALDRFAQCYDDHLRHEDDRIYPAARALLDDPAQQSMGQEMARRRGV HHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCC R C >Mature Secondary Structure ASRVSLPGLHTPGAGFDEPFEMLGACHDRVRRSLDLLQRLRDYLKAHACDDSARQAARD CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH VLRYFDIAAPLHHEDEELHVFPPLLAGGDAALTDLVRQLQRDHVLMAERWAAARVGLQAL HHHHHHHHCCCCCCCCCEEECCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ADGAVQAFTPQHETALDRFAQCYDDHLRHEDDRIYPAARALLDDPAQQSMGQEMARRRGV HHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCC R C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]