| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is 222109653
Identifier: 222109653
GI number: 222109653
Start: 445575
End: 446909
Strand: Direct
Name: 222109653
Synonym: Dtpsy_0433
Alternate gene names: NA
Gene position: 445575-446909 (Clockwise)
Preceding gene: 222109652
Following gene: 222109654
Centisome position: 11.74
GC content: 71.91
Gene sequence:
>1335_bases ATGACTGAAGTGCGGCGCCGCACCGTGCCCCTGCGCAGCGAGCCCGCCGCGCCGGGCCGGCCCTCGGCCGAGGCGCTGGC GCGGCTGGACCGGCGCTGGCGGCCGCGCTACCTCATGCTGGCGCCGCACCGGCTGGGGTTCTTCCTGGCGATGCTGCTGC TCATGGCCTCGGGCCTGTGGTGGGCTCTGGTGCAGATCGACCGCGTGAGCGGGGCACTGGCATTGCCATACGGTGTGGCG CCGTCGCTGGTGCACGCGGCGGTGATGACGTTTGGCTTCATGCCGCTGTTTTTCGCCGGCTTTCTTTTCACCGCGGGACC CAAGTGGCTGCATGTCGAGCCCTGGCCGGTCTCCCGCGTCATGCCGCCCCTGTTGCTGCAGGCCGGCGGCTGGCTGGTGT GGCTCGCCGGCGGTTCCTGGGGGCTATTGGTTGCGCTCGCCGGCTGCGCTGCCGCGTTCCTCGGGTTGGCGTGGATGACG GTGCTTTTCATCCGCCTGGTCCAGTGCAGCACGCTGCAGGACCGTTTGCATGCGCGCGCCATTGCCGCGGCCTGCCTGGT GGGCTGCGTGTGCATCGCGGCGCTGGGGCTGAGCCTGGCCGGCGGCCGTGGCGACCTGGCGCGTGCCTGGGTGCTGACCG GGCTGTGGGGGTTCGTGGCCGCGGTCTTCGTGGTGGTGGCCCACCGCATGATTCCTTTCTTCACCTCGGCTGTGCTGCCC ATGGTGCAGGCCTGGCGCCCTTTCTGGGTTCTGTGGCTGATGCTTGCCGCGGTGGTGGCCGAGGCGCTCGCCGTCTGGCT GCCGTGGCTTGGCTGGGCGCCCGCGCTCGACACGGGCGGGCTGCTGGTGCGTGGCGCGCTGGAGTTGTCGGTGGGGGCCG TGCTGCTGTGGCTGGCCTACCGCTGGGGCCTGCTGCAGAGCTTGGCGCAGCGCCTGCTGGCCATGCTGCACATCGGCTTC ATCTGGCTGGGGCTGGCTTTCGTGGGCCATGGCCTGGCGCACGGGGTGCAGGGTCTCTACGGCAGCGCTGCCGGGGAACT GGGCGCGCTGCATGCGCTCACCATGGGGTGCCTGGGCTCGCTCATGCTCGCCATGGTCACGCGCGTGTCCTGCGGCCATG GCGGCCGCGCGCTGGTGGCGGACCGCCTGGTCTGGACGCTGTTCTGGGTGCTGCAACTGGCGACCGTGGTGCGGCTGGCG GCCAGCGCGCCATTGCCCTGGTCGCCCGTGCTGTTGGCCGTCGCGGCCCTGCTGTGGGCTGGCATCATGGCGGTGTGGGG CCTGCGCCTCATCGGCTGGTATGGCCGGCTGCGCGCCGATGGCCGGCCGGGGTGA
Upstream 100 bases:
>100_bases GAGCAGCGGCACGGGCCCGTATGCGCCGTATGTGGAACATGATGGGCAAGTGCTGGTGGACTGAGGTGCACGCTGGCCAC ACTGGGCGAGGCCCACGCCC
Downstream 100 bases:
>100_bases ATGCCATGGAACAGGAGAGACCGGTGCCTCCACAGGCCTTGAACAATGCAGCCGCCACGGCGGAACTGGCCGCCGCGCTG CTGCAGGCGCGCCAGACCAT
Product: nnrs family protein
Products: NA
Alternate protein names: Nnrs Family Protein
Number of amino acids: Translated: 444; Mature: 443
Protein sequence:
>444_residues MTEVRRRTVPLRSEPAAPGRPSAEALARLDRRWRPRYLMLAPHRLGFFLAMLLLMASGLWWALVQIDRVSGALALPYGVA PSLVHAAVMTFGFMPLFFAGFLFTAGPKWLHVEPWPVSRVMPPLLLQAGGWLVWLAGGSWGLLVALAGCAAAFLGLAWMT VLFIRLVQCSTLQDRLHARAIAAACLVGCVCIAALGLSLAGGRGDLARAWVLTGLWGFVAAVFVVVAHRMIPFFTSAVLP MVQAWRPFWVLWLMLAAVVAEALAVWLPWLGWAPALDTGGLLVRGALELSVGAVLLWLAYRWGLLQSLAQRLLAMLHIGF IWLGLAFVGHGLAHGVQGLYGSAAGELGALHALTMGCLGSLMLAMVTRVSCGHGGRALVADRLVWTLFWVLQLATVVRLA ASAPLPWSPVLLAVAALLWAGIMAVWGLRLIGWYGRLRADGRPG
Sequences:
>Translated_444_residues MTEVRRRTVPLRSEPAAPGRPSAEALARLDRRWRPRYLMLAPHRLGFFLAMLLLMASGLWWALVQIDRVSGALALPYGVA PSLVHAAVMTFGFMPLFFAGFLFTAGPKWLHVEPWPVSRVMPPLLLQAGGWLVWLAGGSWGLLVALAGCAAAFLGLAWMT VLFIRLVQCSTLQDRLHARAIAAACLVGCVCIAALGLSLAGGRGDLARAWVLTGLWGFVAAVFVVVAHRMIPFFTSAVLP MVQAWRPFWVLWLMLAAVVAEALAVWLPWLGWAPALDTGGLLVRGALELSVGAVLLWLAYRWGLLQSLAQRLLAMLHIGF IWLGLAFVGHGLAHGVQGLYGSAAGELGALHALTMGCLGSLMLAMVTRVSCGHGGRALVADRLVWTLFWVLQLATVVRLA ASAPLPWSPVLLAVAALLWAGIMAVWGLRLIGWYGRLRADGRPG >Mature_443_residues TEVRRRTVPLRSEPAAPGRPSAEALARLDRRWRPRYLMLAPHRLGFFLAMLLLMASGLWWALVQIDRVSGALALPYGVAP SLVHAAVMTFGFMPLFFAGFLFTAGPKWLHVEPWPVSRVMPPLLLQAGGWLVWLAGGSWGLLVALAGCAAAFLGLAWMTV LFIRLVQCSTLQDRLHARAIAAACLVGCVCIAALGLSLAGGRGDLARAWVLTGLWGFVAAVFVVVAHRMIPFFTSAVLPM VQAWRPFWVLWLMLAAVVAEALAVWLPWLGWAPALDTGGLLVRGALELSVGAVLLWLAYRWGLLQSLAQRLLAMLHIGFI WLGLAFVGHGLAHGVQGLYGSAAGELGALHALTMGCLGSLMLAMVTRVSCGHGGRALVADRLVWTLFWVLQLATVVRLAA SAPLPWSPVLLAVAALLWAGIMAVWGLRLIGWYGRLRADGRPG
Specific function: Unknown
COG id: COG3213
COG function: function code P; Uncharacterized protein involved in response to NO
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47879; Mature: 47748
Theoretical pI: Translated: 11.70; Mature: 11.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEVRRRTVPLRSEPAAPGRPSAEALARLDRRWRPRYLMLAPHRLGFFLAMLLLMASGLW CCCCHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHCCHH WALVQIDRVSGALALPYGVAPSLVHAAVMTFGFMPLFFAGFLFTAGPKWLHVEPWPVSRV HHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHH MPPLLLQAGGWLVWLAGGSWGLLVALAGCAAAFLGLAWMTVLFIRLVQCSTLQDRLHARA CHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IAAACLVGCVCIAALGLSLAGGRGDLARAWVLTGLWGFVAAVFVVVAHRMIPFFTSAVLP HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MVQAWRPFWVLWLMLAAVVAEALAVWLPWLGWAPALDTGGLLVRGALELSVGAVLLWLAY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH RWGLLQSLAQRLLAMLHIGFIWLGLAFVGHGLAHGVQGLYGSAAGELGALHALTMGCLGS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LMLAMVTRVSCGHGGRALVADRLVWTLFWVLQLATVVRLAASAPLPWSPVLLAVAALLWA HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH GIMAVWGLRLIGWYGRLRADGRPG HHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TEVRRRTVPLRSEPAAPGRPSAEALARLDRRWRPRYLMLAPHRLGFFLAMLLLMASGLW CCCHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHCCHH WALVQIDRVSGALALPYGVAPSLVHAAVMTFGFMPLFFAGFLFTAGPKWLHVEPWPVSRV HHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHH MPPLLLQAGGWLVWLAGGSWGLLVALAGCAAAFLGLAWMTVLFIRLVQCSTLQDRLHARA CHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IAAACLVGCVCIAALGLSLAGGRGDLARAWVLTGLWGFVAAVFVVVAHRMIPFFTSAVLP HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MVQAWRPFWVLWLMLAAVVAEALAVWLPWLGWAPALDTGGLLVRGALELSVGAVLLWLAY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH RWGLLQSLAQRLLAMLHIGFIWLGLAFVGHGLAHGVQGLYGSAAGELGALHALTMGCLGS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LMLAMVTRVSCGHGGRALVADRLVWTLFWVLQLATVVRLAASAPLPWSPVLLAVAALLWA HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH GIMAVWGLRLIGWYGRLRADGRPG HHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA