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The map label for this gene is narP [H]

Identifier: 222109644

GI number: 222109644

Start: 433506

End: 434177

Strand: Direct

Name: narP [H]

Synonym: Dtpsy_0424

Alternate gene names: 222109644

Gene position: 433506-434177 (Clockwise)

Preceding gene: 222109643

Following gene: 222109645

Centisome position: 11.42

GC content: 68.01

Gene sequence:

>672_bases
ATGAATGCTCCCACCACGCTTTTCCTGATCGATGACCACACCTTGCTGCGCCGCGGACTGGTGGCGCTGCTGTCCCAGCA
GCCGGACCTGCGCGTGGTGGGCGAGGCCGGGGACGCCGCGGAGGCATTGCGTCTGCTGCCTGCGCTGCGCCCCGACGTGA
TCCTGCTGGACAACCACCTGCCCGGTGTGCGCGGCGTGGACGCCATCGCCGGCCTGCGCGAGGCGTCGCAGGGCAGCCGC
GTGTTGATGCTCACGGTGAGCGAAGATGGGCAGGATCTGGCGGCCGCCTTGCGCAACGGCGCGCAGGGGTATTTGCTCAA
GACCATTGACGGTGACCTGCTTGCGCAGGCGATACGGCGGGCTGCACGCGGCGAGCCGGTGGTCAGCCCCGAAATGATGG
GCAAGCTGGTGGCGGCGTTCCAGTCCCAGGGGGCGCCCACGCCCGAGCCCTTGCCCGAAGAGGAAGAGCCCGCGTCGGTG
CTGTCGCCGCGCGAAGAAGACGTGTTGCGCGAGATTGCGCGCGGTCTCAGCAACAAGGAGATCGCACGTGCGCTCGACAT
TGCCGAGACCACCGTGAAGATCCATGTGCAGCACATTCTGCGCAAGCTGGGACTGTCCTCGCGCGTGCAGGCGGCGGTCT
ACGCCTCGGACCGCCACCGCCTCACGGAATAA

Upstream 100 bases:

>100_bases
CGCGCCCCGGCGGCGGTGGCACCTGCGTAATCCTGGAGCTGCCACCAACCACCCGCGAGGAGCCTGCGTTGCCCCTCTCC
CTTGTTTCTTCCGCCGCCGC

Downstream 100 bases:

>100_bases
CCCCAGAGCCCGGCATAGTTCTTAGGGAGTAGGGCGGCATAGGCCGCCCTCGTCCTTTTGCACCGCCCGCGGTGTCCCAG
CGAAGGATGTGCAGGCACGG

Product: two component LuxR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MNAPTTLFLIDDHTLLRRGLVALLSQQPDLRVVGEAGDAAEALRLLPALRPDVILLDNHLPGVRGVDAIAGLREASQGSR
VLMLTVSEDGQDLAAALRNGAQGYLLKTIDGDLLAQAIRRAARGEPVVSPEMMGKLVAAFQSQGAPTPEPLPEEEEPASV
LSPREEDVLREIARGLSNKEIARALDIAETTVKIHVQHILRKLGLSSRVQAAVYASDRHRLTE

Sequences:

>Translated_223_residues
MNAPTTLFLIDDHTLLRRGLVALLSQQPDLRVVGEAGDAAEALRLLPALRPDVILLDNHLPGVRGVDAIAGLREASQGSR
VLMLTVSEDGQDLAAALRNGAQGYLLKTIDGDLLAQAIRRAARGEPVVSPEMMGKLVAAFQSQGAPTPEPLPEEEEPASV
LSPREEDVLREIARGLSNKEIARALDIAETTVKIHVQHILRKLGLSSRVQAAVYASDRHRLTE
>Mature_223_residues
MNAPTTLFLIDDHTLLRRGLVALLSQQPDLRVVGEAGDAAEALRLLPALRPDVILLDNHLPGVRGVDAIAGLREASQGSR
VLMLTVSEDGQDLAAALRNGAQGYLLKTIDGDLLAQAIRRAARGEPVVSPEMMGKLVAAFQSQGAPTPEPLPEEEEPASV
LSPREEDVLREIARGLSNKEIARALDIAETTVKIHVQHILRKLGLSSRVQAAVYASDRHRLTE

Specific function: This protein activates the expression of the nitrate reductase (narGHJI) and formate dehydrogenase-N (fdnGHI) operons and represses the transcription of the fumarate reductase (frdABCD) operon in response to a nitrate/nitrite induction signal transmitted

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788521, Length=210, Percent_Identity=43.3333333333333, Blast_Score=157, Evalue=7e-40,
Organism=Escherichia coli, GI1787473, Length=211, Percent_Identity=44.5497630331754, Blast_Score=145, Evalue=2e-36,
Organism=Escherichia coli, GI1790102, Length=207, Percent_Identity=32.8502415458937, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI1786747, Length=212, Percent_Identity=28.3018867924528, Blast_Score=90, Evalue=1e-19,
Organism=Escherichia coli, GI1788222, Length=205, Percent_Identity=27.3170731707317, Blast_Score=82, Evalue=2e-17,
Organism=Escherichia coli, GI1786838, Length=205, Percent_Identity=26.3414634146341, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI1788712, Length=218, Percent_Identity=25.2293577981651, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI1788546, Length=221, Percent_Identity=26.6968325791855, Blast_Score=61, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 24014; Mature: 24014

Theoretical pI: Translated: 5.37; Mature: 5.37

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAPTTLFLIDDHTLLRRGLVALLSQQPDLRVVGEAGDAAEALRLLPALRPDVILLDNHL
CCCCEEEEEECCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHCCCCCEEEECCCC
PGVRGVDAIAGLREASQGSRVLMLTVSEDGQDLAAALRNGAQGYLLKTIDGDLLAQAIRR
CCCCHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHCCCCCEEEEECCHHHHHHHHHH
AARGEPVVSPEMMGKLVAAFQSQGAPTPEPLPEEEEPASVLSPREEDVLREIARGLSNKE
HHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHCCCHHH
IARALDIAETTVKIHVQHILRKLGLSSRVQAAVYASDRHRLTE
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHEEECCHHCCCC
>Mature Secondary Structure
MNAPTTLFLIDDHTLLRRGLVALLSQQPDLRVVGEAGDAAEALRLLPALRPDVILLDNHL
CCCCEEEEEECCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHCCCCCEEEECCCC
PGVRGVDAIAGLREASQGSRVLMLTVSEDGQDLAAALRNGAQGYLLKTIDGDLLAQAIRR
CCCCHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHCCCCCEEEEECCHHHHHHHHHH
AARGEPVVSPEMMGKLVAAFQSQGAPTPEPLPEEEEPASVLSPREEDVLREIARGLSNKE
HHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHCCCHHH
IARALDIAETTVKIHVQHILRKLGLSSRVQAAVYASDRHRLTE
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHEEECCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8501030; 9278503 [H]