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The map label for this gene is 222109506

Identifier: 222109506

GI number: 222109506

Start: 298042

End: 298503

Strand: Direct

Name: 222109506

Synonym: Dtpsy_0286

Alternate gene names: NA

Gene position: 298042-298503 (Clockwise)

Preceding gene: 222109503

Following gene: 222109508

Centisome position: 7.85

GC content: 68.4

Gene sequence:

>462_bases
ATGCCAATCAAAGCCCTCGCTCTTGCCGCCACCGCAGCAGCCGCCACGCTGGTGTCGCTGCCCGCCGCTGCCCAGTTCGC
CAAGCCAGAAGATGCCATCAAGTACCGCCAGGGTGCGCTGTTCGTGATGGGACAGCATTTCGGCCGCATCGGCGCTATGG
CCAATGGCCGCGTGCCGTTCGACGCGAAGGCTGCGCAAGAGAATGCCGATACCGTCGCCGCCCTGGCCGCTTTGCCGTGG
GCCGGCTTCGGCCCCGGCACGGACAAGGGCGCGCCCACCAAGGCCAAGCCCGGCGTGTGGACCGAACAGGCCAAGTTCCA
GGAGCATGCCGACAAATTCCAGGCCGAGGCCGCCAAGCTGGCCGCCGCCGCCAAGACGGGCAGCCTGGACAACCTGAAGG
CCGCGTTCGGCCCGGCGGCCAATTCCTGCAAGGCGTGCCACGACGCCTACCGCGCACGTTGA

Upstream 100 bases:

>100_bases
TTGCGGCCACGGTGTCACGCGGCCGCGCCATACTGCGCGCCGGCGCAGGGCGTCCAGCCGTCGCCGCAGCCATTCCCTTC
CCCACGACAAGGTGCATTCC

Downstream 100 bases:

>100_bases
TGCGCTATTGAACTAGTAGCTGCTAGCGCTTGCTGTATAAGCGCGAAAGGCCGATTTCGTTCAGGAAATCGGCCTTTTTT
CTGAAGAAAGGTGCCTCAGG

Product: cytochrome c prime

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 153; Mature: 152

Protein sequence:

>153_residues
MPIKALALAATAAAATLVSLPAAAQFAKPEDAIKYRQGALFVMGQHFGRIGAMANGRVPFDAKAAQENADTVAALAALPW
AGFGPGTDKGAPTKAKPGVWTEQAKFQEHADKFQAEAAKLAAAAKTGSLDNLKAAFGPAANSCKACHDAYRAR

Sequences:

>Translated_153_residues
MPIKALALAATAAAATLVSLPAAAQFAKPEDAIKYRQGALFVMGQHFGRIGAMANGRVPFDAKAAQENADTVAALAALPW
AGFGPGTDKGAPTKAKPGVWTEQAKFQEHADKFQAEAAKLAAAAKTGSLDNLKAAFGPAANSCKACHDAYRAR
>Mature_152_residues
PIKALALAATAAAATLVSLPAAAQFAKPEDAIKYRQGALFVMGQHFGRIGAMANGRVPFDAKAAQENADTVAALAALPWA
GFGPGTDKGAPTKAKPGVWTEQAKFQEHADKFQAEAAKLAAAAKTGSLDNLKAAFGPAANSCKACHDAYRAR

Specific function: Cytochrome c' is the most widely occurring bacterial c- type cytochrome. Cytochromes c' are high-spin proteins and the heme has no sixth ligand. Their exact function is not known [H]

COG id: COG3909

COG function: function code C; Cytochrome c556

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010980
- InterPro:   IPR002321
- InterPro:   IPR012127
- InterPro:   IPR015984 [H]

Pfam domain/function: PF01322 Cytochrom_C_2 [H]

EC number: NA

Molecular weight: Translated: 15708; Mature: 15577

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: PS51009 CYTCII

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIKALALAATAAAATLVSLPAAAQFAKPEDAIKYRQGALFVMGQHFGRIGAMANGRVPF
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCEEEEECHHHHHHCCCCCCCCCC
DAKAAQENADTVAALAALPWAGFGPGTDKGAPTKAKPGVWTEQAKFQEHADKFQAEAAKL
CCHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
AAAAKTGSLDNLKAAFGPAANSCKACHDAYRAR
HHHHHCCCCCHHHHHCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure 
PIKALALAATAAAATLVSLPAAAQFAKPEDAIKYRQGALFVMGQHFGRIGAMANGRVPF
CHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCEEEEECHHHHHHCCCCCCCCCC
DAKAAQENADTVAALAALPWAGFGPGTDKGAPTKAKPGVWTEQAKFQEHADKFQAEAAKL
CCHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
AAAAKTGSLDNLKAAFGPAANSCKACHDAYRAR
HHHHHCCCCCHHHHHCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 4360249; 11060017; 11300792 [H]