| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is 222109503
Identifier: 222109503
GI number: 222109503
Start: 295986
End: 296492
Strand: Direct
Name: 222109503
Synonym: Dtpsy_0283
Alternate gene names: NA
Gene position: 295986-296492 (Clockwise)
Preceding gene: 222109502
Following gene: 222109506
Centisome position: 7.8
GC content: 67.06
Gene sequence:
>507_bases ATGATCCAAGTCGGCGACACGCTGCCCGCCATCACACTGATGGAGTACTCGGAAGTCGAGGGCAATGGCTGCAGCCTCGG CCCGAACCCGGTGGATGTGCAAAAGGCCGCCGCGGGCAAGACGATTGCGCTGTTCGCGGTGCCGGGCGCCTTCACGCCCA CCTGCTCGGCCAAGCACGTGCCCGGCTACGTGGAGCAGGCGGGCGACCTGAAGGCTGCCGGCGTGGATGAGATCTGGTGC CTGTCGGTGAACGATGCCTTCGTGATGGGCGCGTGGGCGCGCGACCAGAAGACCGATGGCAAGGTGCGCATGCTGGCGGA CGGCGACGCAGCCTTCGCCAAGGCCACCGGTCTGACGCTGGACTTGAACGGCAAGGGCCTGGGCCTGCGCAGCAACCGCT ATTCCATGCTGGTCAAGGACGGCAAGGTGGTTGCCCTGAACGTCGAGGCGCCGGGCAAGTTCGAGGTGAGCGACGCCGCT ACGCTGCTCGGCCAGGCCAAGGGCTGA
Upstream 100 bases:
>100_bases CGTCTGCGCGCCTCCGAGAAACGACCCACAATGTGGGTCGTTTTTCTTTTTGGGGCCCGCAGATCCTGCCGGGGCCCTCC AACCCAGCAAGGAGATTCTC
Downstream 100 bases:
>100_bases CGCCGCTGGCGCTGGTATCGGAGGGCTCCGGTGCTGGCACCACGCCGCAGGCGAAACGCCGCCCCGTCGCGAGATGTGGG CGGCTTTGCTATTATTTGGA
Product: redoxin domain-containing protein
Products: NA
Alternate protein names: Thioredoxin reductase [H]
Number of amino acids: Translated: 168; Mature: 168
Protein sequence:
>168_residues MIQVGDTLPAITLMEYSEVEGNGCSLGPNPVDVQKAAAGKTIALFAVPGAFTPTCSAKHVPGYVEQAGDLKAAGVDEIWC LSVNDAFVMGAWARDQKTDGKVRMLADGDAAFAKATGLTLDLNGKGLGLRSNRYSMLVKDGKVVALNVEAPGKFEVSDAA TLLGQAKG
Sequences:
>Translated_168_residues MIQVGDTLPAITLMEYSEVEGNGCSLGPNPVDVQKAAAGKTIALFAVPGAFTPTCSAKHVPGYVEQAGDLKAAGVDEIWC LSVNDAFVMGAWARDQKTDGKVRMLADGDAAFAKATGLTLDLNGKGLGLRSNRYSMLVKDGKVVALNVEAPGKFEVSDAA TLLGQAKG >Mature_168_residues MIQVGDTLPAITLMEYSEVEGNGCSLGPNPVDVQKAAAGKTIALFAVPGAFTPTCSAKHVPGYVEQAGDLKAAGVDEIWC LSVNDAFVMGAWARDQKTDGKVRMLADGDAAFAKATGLTLDLNGKGLGLRSNRYSMLVKDGKVVALNVEAPGKFEVSDAA TLLGQAKG
Specific function: Unknown
COG id: COG0678
COG function: function code O; Peroxiredoxin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Homo sapiens, GI6912238, Length=153, Percent_Identity=49.0196078431373, Blast_Score=130, Evalue=5e-31, Organism=Saccharomyces cerevisiae, GI6323138, Length=131, Percent_Identity=30.5343511450382, Blast_Score=65, Evalue=4e-12, Organism=Drosophila melanogaster, GI78706776, Length=153, Percent_Identity=48.3660130718954, Blast_Score=139, Evalue=6e-34, Organism=Drosophila melanogaster, GI78709078, Length=153, Percent_Identity=48.3660130718954, Blast_Score=139, Evalue=6e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013740 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF08534 Redoxin [H]
EC number: =1.11.1.15 [H]
Molecular weight: Translated: 17387; Mature: 17387
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIQVGDTLPAITLMEYSEVEGNGCSLGPNPVDVQKAAAGKTIALFAVPGAFTPTCSAKHV CEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCHHCCCCEEEEEEECCCCCCCCCCCCC PGYVEQAGDLKAAGVDEIWCLSVNDAFVMGAWARDQKTDGKVRMLADGDAAFAKATGLTL CCHHHHCCCEEECCCCEEEEEECCCEEEEEEECCCCCCCCCEEEEECCCCCEEEECCCEE DLNGKGLGLRSNRYSMLVKDGKVVALNVEAPGKFEVSDAATLLGQAKG EECCCCCEEECCCEEEEEECCEEEEEEECCCCCEECHHHHHEEECCCC >Mature Secondary Structure MIQVGDTLPAITLMEYSEVEGNGCSLGPNPVDVQKAAAGKTIALFAVPGAFTPTCSAKHV CEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCHHCCCCEEEEEEECCCCCCCCCCCCC PGYVEQAGDLKAAGVDEIWCLSVNDAFVMGAWARDQKTDGKVRMLADGDAAFAKATGLTL CCHHHHCCCEEECCCCEEEEEECCCEEEEEEECCCCCCCCCEEEEECCCCCEEEECCCEE DLNGKGLGLRSNRYSMLVKDGKVVALNVEAPGKFEVSDAATLLGQAKG EECCCCCEEECCCEEEEEECCEEEEEEECCCCCEECHHHHHEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]