| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is 222109486
Identifier: 222109486
GI number: 222109486
Start: 283723
End: 284370
Strand: Direct
Name: 222109486
Synonym: Dtpsy_0266
Alternate gene names: NA
Gene position: 283723-284370 (Clockwise)
Preceding gene: 222109485
Following gene: 222109487
Centisome position: 7.47
GC content: 70.99
Gene sequence:
>648_bases GTGAATGCCCAGACCGAACGCCTGACCCTCACGGGCGCCGCGGGTGCCATCGAGGCTGCGCGCGATGCCGCGGCCGACGG CGTACCGCCGCGCGGCGTGGCGGTGATCGCCCATCCCCACCCGCTCTTCGGCGGCACCATGGACAACAAGGTGGTGCAAA CCCTGGCGCGCGCCTTTGTGGCCTGCGGCTGGACGGCCGTGCGCTTCAACTTCCGCGGCGTCGGCGGTACCGCAGGCGTG CATGACGAAGGGCGCGGTGAGCTGGAGGATCTGCTGGCCGTCGTCCGCCAGGTGGCGCCCGAGGGGCCTGGCGCCGTGCC GATTGCCCTCGCGGGTTTCTCCTTCGGCGCCTTCGTCACCAGCCACGCGCTGGCGCGCGTGTGGGGTGAGCGTGCGGTGG AGCGTGCCGTGCTCGTGGGCACGGCGGCCAGCCGGTTCAAGGTGGCCGACGTACCCGCCGAGGCCCATCTGCGCACCCTG GTCGTGCACGGCGAAGCCGATGACACCGTGCCCCTGTCCGCTGTGATGGATTGGGCGCGCCCGCAGACACTGCCGGTTAC GGTTGTGCCTGGGGGCGGTCATTTCTTTCACGGACAATTGCCGCTGCTCAAGGGCCTGGTCATGCGCCACCTGCAATCCG CGCCCTGA
Upstream 100 bases:
>100_bases GGAACTTGGCCGCTGATTTGCGCTCACTACCCTCTTTGTAGTGTTTTTGGGCTCCAGCGCTTTCCCATCCAGCGCGGGCA GCTCTTGATTGGATAGCAAC
Downstream 100 bases:
>100_bases CGGCGCGGCACCTTTCTCTTGTGCCGGCCATGCGGTCGGCCCATTTCTTCTCCCGTTTCCCGAGTGCCTGTTCCCACCAT GAAGTCTCTTTTGTCCTCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 215; Mature: 215
Protein sequence:
>215_residues MNAQTERLTLTGAAGAIEAARDAAADGVPPRGVAVIAHPHPLFGGTMDNKVVQTLARAFVACGWTAVRFNFRGVGGTAGV HDEGRGELEDLLAVVRQVAPEGPGAVPIALAGFSFGAFVTSHALARVWGERAVERAVLVGTAASRFKVADVPAEAHLRTL VVHGEADDTVPLSAVMDWARPQTLPVTVVPGGGHFFHGQLPLLKGLVMRHLQSAP
Sequences:
>Translated_215_residues MNAQTERLTLTGAAGAIEAARDAAADGVPPRGVAVIAHPHPLFGGTMDNKVVQTLARAFVACGWTAVRFNFRGVGGTAGV HDEGRGELEDLLAVVRQVAPEGPGAVPIALAGFSFGAFVTSHALARVWGERAVERAVLVGTAASRFKVADVPAEAHLRTL VVHGEADDTVPLSAVMDWARPQTLPVTVVPGGGHFFHGQLPLLKGLVMRHLQSAP >Mature_215_residues MNAQTERLTLTGAAGAIEAARDAAADGVPPRGVAVIAHPHPLFGGTMDNKVVQTLARAFVACGWTAVRFNFRGVGGTAGV HDEGRGELEDLLAVVRQVAPEGPGAVPIALAGFSFGAFVTSHALARVWGERAVERAVLVGTAASRFKVADVPAEAHLRTL VVHGEADDTVPLSAVMDWARPQTLPVTVVPGGGHFFHGQLPLLKGLVMRHLQSAP
Specific function: Unknown
COG id: COG2945
COG function: function code R; Predicted hydrolase of the alpha/beta superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000383 [H]
Pfam domain/function: PF02129 Peptidase_S15 [H]
EC number: NA
Molecular weight: Translated: 22365; Mature: 22365
Theoretical pI: Translated: 7.35; Mature: 7.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAQTERLTLTGAAGAIEAARDAAADGVPPRGVAVIAHPHPLFGGTMDNKVVQTLARAFV CCCCCCEEEEECCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHH ACGWTAVRFNFRGVGGTAGVHDEGRGELEDLLAVVRQVAPEGPGAVPIALAGFSFGAFVT HCCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHH SHALARVWGERAVERAVLVGTAASRFKVADVPAEAHLRTLVVHGEADDTVPLSAVMDWAR HHHHHHHHHHHHHHHHHHEECCCCCEEEECCCHHHCEEEEEEECCCCCCCHHHHHHHHCC PQTLPVTVVPGGGHFFHGQLPLLKGLVMRHLQSAP CCCEEEEEECCCCCEECCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MNAQTERLTLTGAAGAIEAARDAAADGVPPRGVAVIAHPHPLFGGTMDNKVVQTLARAFV CCCCCCEEEEECCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHH ACGWTAVRFNFRGVGGTAGVHDEGRGELEDLLAVVRQVAPEGPGAVPIALAGFSFGAFVT HCCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHH SHALARVWGERAVERAVLVGTAASRFKVADVPAEAHLRTLVVHGEADDTVPLSAVMDWAR HHHHHHHHHHHHHHHHHHEECCCCCEEEECCCHHHCEEEEEEECCCCCCCHHHHHHHHCC PQTLPVTVVPGGGHFFHGQLPLLKGLVMRHLQSAP CCCEEEEEECCCCCEECCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]