Click here to switch to the map view.

The map label for this gene is fdx4 [H]

Identifier: 222109485

GI number: 222109485

Start: 283297

End: 283638

Strand: Direct

Name: fdx4 [H]

Synonym: Dtpsy_0265

Alternate gene names: 222109485

Gene position: 283297-283638 (Clockwise)

Preceding gene: 222109484

Following gene: 222109486

Centisome position: 7.46

GC content: 64.04

Gene sequence:

>342_bases
ATGAGCGACACCACCCCCCAGTACTACCAGCGCCACATCTTCTTTTGCCTGAACGAGCGCACGAACGGCGAGAACTGCTG
CGCCCACCATGGCGCCCAGCAGGCGTTTGACCGTTGCAAGATGCTGGTCAAGCAGCAAGGCCTGATGGGCCCCGGCAAGG
TGCGCGTGAACAAGGCGGGCTGCCTGGACCGCTGCGCCGGTGGCCCCATCGCCGTGGTCTATCCCGAAGGGACTTGGTAC
ACCTACGTGGATGAGAGCGACATCGACGAGATCGTGGAGTCGCACCTCAAGAACGGCGTGGTGGTCGAGCGCTTGCTCAC
GCCGCCGGAACTTGGCCGCTGA

Upstream 100 bases:

>100_bases
CGGCCTGGGGCAGTGGCTGGGCTGGCTCTGGCCCTATGGGGCACTCGTCTATGTGGTATTGCGGGTGTCGCGCCGCGATG
GCGACTCCTAGAATCGTGCC

Downstream 100 bases:

>100_bases
TTTGCGCTCACTACCCTCTTTGTAGTGTTTTTGGGCTCCAGCGCTTTCCCATCCAGCGCGGGCAGCTCTTGATTGGATAG
CAACGTGAATGCCCAGACCG

Product: ferredoxin-like protein

Products: NA

Alternate protein names: AaFd4 [H]

Number of amino acids: Translated: 113; Mature: 112

Protein sequence:

>113_residues
MSDTTPQYYQRHIFFCLNERTNGENCCAHHGAQQAFDRCKMLVKQQGLMGPGKVRVNKAGCLDRCAGGPIAVVYPEGTWY
TYVDESDIDEIVESHLKNGVVVERLLTPPELGR

Sequences:

>Translated_113_residues
MSDTTPQYYQRHIFFCLNERTNGENCCAHHGAQQAFDRCKMLVKQQGLMGPGKVRVNKAGCLDRCAGGPIAVVYPEGTWY
TYVDESDIDEIVESHLKNGVVVERLLTPPELGR
>Mature_112_residues
SDTTPQYYQRHIFFCLNERTNGENCCAHHGAQQAFDRCKMLVKQQGLMGPGKVRVNKAGCLDRCAGGPIAVVYPEGTWYT
YVDESDIDEIVESHLKNGVVVERLLTPPELGR

Specific function: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions [H]

COG id: COG3411

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 2Fe2S Shethna-type ferredoxin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002023
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF01257 Complex1_24kDa [H]

EC number: NA

Molecular weight: Translated: 12674; Mature: 12542

Theoretical pI: Translated: 6.49; Mature: 6.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
8.0 %Cys+Met (Translated Protein)
5.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDTTPQYYQRHIFFCLNERTNGENCCAHHGAQQAFDRCKMLVKQQGLMGPGKVRVNKAG
CCCCCHHHHHHEEEEEECCCCCCCHHHHHCCHHHHHHHHHHHHHHCCCCCCCEEEECCCC
CLDRCAGGPIAVVYPEGTWYTYVDESDIDEIVESHLKNGVVVERLLTPPELGR
CHHHCCCCCEEEEECCCCEEEEECCCCHHHHHHHHHCCCEEEHHHCCCCCCCC
>Mature Secondary Structure 
SDTTPQYYQRHIFFCLNERTNGENCCAHHGAQQAFDRCKMLVKQQGLMGPGKVRVNKAG
CCCCHHHHHHEEEEEECCCCCCCHHHHHCCHHHHHHHHHHHHHHCCCCCCCEEEECCCC
CLDRCAGGPIAVVYPEGTWYTYVDESDIDEIVESHLKNGVVVERLLTPPELGR
CHHHCCCCCEEEEECCCCEEEEECCCCHHHHHHHHHCCCEEEHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320; 10441520; 10884354; 12089152 [H]