| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is 222109484
Identifier: 222109484
GI number: 222109484
Start: 282190
End: 283287
Strand: Direct
Name: 222109484
Synonym: Dtpsy_0264
Alternate gene names: NA
Gene position: 282190-283287 (Clockwise)
Preceding gene: 222109483
Following gene: 222109485
Centisome position: 7.43
GC content: 70.95
Gene sequence:
>1098_bases ATGCACAAGACGTCCGCCTGGCCTCTGGCGCTCATCTACGCGGCGCTGATCGTCTTCGCCAGCCTGTTCCCGTTCGACGG GTGGCGCGAGCAGGGAATCTCGCCCTGGGTGTTCTTCTCGGCGCGCATCCCGCCGCCGTACTGGACCTGGTTCGACGTCA ACATGAACATCGCGGGCTATGCCCCGCTGGGGTTCCTGCTGGCCCTGGCGGGCCTGCGTTCTGGCTGGCCGCGCGCGGCC GTGCCGTTGGCGGCACTGGCGGGTGCGCTGCTGTCGCTGAGCATGGAATACCTGCAGATCTTCCTGCCGCGGCGGGTGCC GTCCAACATGGACTTCGCGCTCAACGCGACCGGTGCGCTGCTGGGAGCGTTGGCGGCCGCGCTGCTGGAGCGCTTCGGGG CCATTGCGCACTGGAGCCGCTTTCGCGAGCGCTGGTTCGTTCCGCATGCGCGCGGCGCGCTGGTGCTACTGGCGCTGTGG CCCTGGGCACTGCTGTTCCCGGCGGCGCTGCCCTTTGGCCTGGGGCAGATGTGGGAGCGGCTGGAGGCCGCGCTCATCGA CGCGCTGCAGGACACGCCGTTTCTGCAGTGGCTGCCCGTGCGCGAGGCGCCGCTGGAGCCACTGTCGCCGGGCGCGGAGC TCATGGCCGTCGCGCTGGGGCTGCTGATCCCCTGCCTGCTGGGCTACTGCGTCATGCGCCATGCGGGGCGCCGCATGGCC TTCGCACTGGCGACGGCCGCCGTGGGCGTGGGCGTGACGGCGCTGTCGTCGCTGTTGAGCTACGGGCCCACGCACGCCTG GGAGTGGCTCACGCTGCCGGCCCGCATGGGCGTGCTTGTTGCCCTGGGGGCGGCCCTGGCGATGGCGGCCGTGCCGCGGC GCGGCTGCGCGGCGTTACTGCTGCTGGCGCTGATGCTGCACCTGAACCTGCTCAACCAGGCGCCCACCAGCGCCTACTTC GCACAGACGCTGCAGGCCTGGGAGCAGGGGCGCTTCATCCGCTTCTACGGCCTGGGGCAGTGGCTGGGCTGGCTCTGGCC CTATGGGGCACTCGTCTATGTGGTATTGCGGGTGTCGCGCCGCGATGGCGACTCCTAG
Upstream 100 bases:
>100_bases TGAGATGCAGCGGCTGCAGCGTTGCCCGGCTTCGTTCCCTCGCAATGGGGGCGGCGCGCGGCGGGCGGCAGCGGCCACGG CACGAGGTGGTTGAGAGGGC
Downstream 100 bases:
>100_bases AATCGTGCCATGAGCGACACCACCCCCCAGTACTACCAGCGCCACATCTTCTTTTGCCTGAACGAGCGCACGAACGGCGA GAACTGCTGCGCCCACCATG
Product: vanz family protein
Products: NA
Alternate protein names: VanZ Like Protein; Vanz Family Protein
Number of amino acids: Translated: 365; Mature: 365
Protein sequence:
>365_residues MHKTSAWPLALIYAALIVFASLFPFDGWREQGISPWVFFSARIPPPYWTWFDVNMNIAGYAPLGFLLALAGLRSGWPRAA VPLAALAGALLSLSMEYLQIFLPRRVPSNMDFALNATGALLGALAAALLERFGAIAHWSRFRERWFVPHARGALVLLALW PWALLFPAALPFGLGQMWERLEAALIDALQDTPFLQWLPVREAPLEPLSPGAELMAVALGLLIPCLLGYCVMRHAGRRMA FALATAAVGVGVTALSSLLSYGPTHAWEWLTLPARMGVLVALGAALAMAAVPRRGCAALLLLALMLHLNLLNQAPTSAYF AQTLQAWEQGRFIRFYGLGQWLGWLWPYGALVYVVLRVSRRDGDS
Sequences:
>Translated_365_residues MHKTSAWPLALIYAALIVFASLFPFDGWREQGISPWVFFSARIPPPYWTWFDVNMNIAGYAPLGFLLALAGLRSGWPRAA VPLAALAGALLSLSMEYLQIFLPRRVPSNMDFALNATGALLGALAAALLERFGAIAHWSRFRERWFVPHARGALVLLALW PWALLFPAALPFGLGQMWERLEAALIDALQDTPFLQWLPVREAPLEPLSPGAELMAVALGLLIPCLLGYCVMRHAGRRMA FALATAAVGVGVTALSSLLSYGPTHAWEWLTLPARMGVLVALGAALAMAAVPRRGCAALLLLALMLHLNLLNQAPTSAYF AQTLQAWEQGRFIRFYGLGQWLGWLWPYGALVYVVLRVSRRDGDS >Mature_365_residues MHKTSAWPLALIYAALIVFASLFPFDGWREQGISPWVFFSARIPPPYWTWFDVNMNIAGYAPLGFLLALAGLRSGWPRAA VPLAALAGALLSLSMEYLQIFLPRRVPSNMDFALNATGALLGALAAALLERFGAIAHWSRFRERWFVPHARGALVLLALW PWALLFPAALPFGLGQMWERLEAALIDALQDTPFLQWLPVREAPLEPLSPGAELMAVALGLLIPCLLGYCVMRHAGRRMA FALATAAVGVGVTALSSLLSYGPTHAWEWLTLPARMGVLVALGAALAMAAVPRRGCAALLLLALMLHLNLLNQAPTSAYF AQTLQAWEQGRFIRFYGLGQWLGWLWPYGALVYVVLRVSRRDGDS
Specific function: Unknown
COG id: COG5652
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40058; Mature: 40058
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHKTSAWPLALIYAALIVFASLFPFDGWREQGISPWVFFSARIPPPYWTWFDVNMNIAGY CCCCCCCHHHHHHHHHHHHHHHCCCCCHHHCCCCCEEEEEECCCCCCEEEEEECCCCCCC APLGFLLALAGLRSGWPRAAVPLAALAGALLSLSMEYLQIFLPRRVPSNMDFALNATGAL HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHH LGALAAALLERFGAIAHWSRFRERWFVPHARGALVLLALWPWALLFPAALPFGLGQMWER HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHH LEAALIDALQDTPFLQWLPVREAPLEPLSPGAELMAVALGLLIPCLLGYCVMRHAGRRMA HHHHHHHHHCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHH FALATAAVGVGVTALSSLLSYGPTHAWEWLTLPARMGVLVALGAALAMAAVPRRGCAALL HHHHHHHHHHHHHHHHHHHHCCCCCCHHHEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHH LLALMLHLNLLNQAPTSAYFAQTLQAWEQGRFIRFYGLGQWLGWLWPYGALVYVVLRVSR HHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHH RDGDS CCCCC >Mature Secondary Structure MHKTSAWPLALIYAALIVFASLFPFDGWREQGISPWVFFSARIPPPYWTWFDVNMNIAGY CCCCCCCHHHHHHHHHHHHHHHCCCCCHHHCCCCCEEEEEECCCCCCEEEEEECCCCCCC APLGFLLALAGLRSGWPRAAVPLAALAGALLSLSMEYLQIFLPRRVPSNMDFALNATGAL HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHH LGALAAALLERFGAIAHWSRFRERWFVPHARGALVLLALWPWALLFPAALPFGLGQMWER HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHH LEAALIDALQDTPFLQWLPVREAPLEPLSPGAELMAVALGLLIPCLLGYCVMRHAGRRMA HHHHHHHHHCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHH FALATAAVGVGVTALSSLLSYGPTHAWEWLTLPARMGVLVALGAALAMAAVPRRGCAALL HHHHHHHHHHHHHHHHHHHHCCCCCCHHHEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHH LLALMLHLNLLNQAPTSAYFAQTLQAWEQGRFIRFYGLGQWLGWLWPYGALVYVVLRVSR HHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHH RDGDS CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA