Click here to switch to the map view.

The map label for this gene is mreD [C]

Identifier: 222109455

GI number: 222109455

Start: 254395

End: 254916

Strand: Direct

Name: mreD [C]

Synonym: Dtpsy_0235

Alternate gene names: 222109455

Gene position: 254395-254916 (Clockwise)

Preceding gene: 222109454

Following gene: 222109456

Centisome position: 6.7

GC content: 68.2

Gene sequence:

>522_bases
ATGATCATGCCCAAGGGCCAGCAGCTGCTGCTGCCCGTGAACCCGGTCTTCATCGCTGCCAGCCTGGTGGCCGCGCTGGC
GCTGAACATGCTGCCACTGGGCCGCGTGGTCTGGACGCCCGACTGGGTCATGGTGCTGCTCGTGTTTTGGGGCATGCACC
AGCCGCAGCGCGTGGGGCTGGGGGTGGCTTTCCTCATGGGGCTGTGCCTGGATGTGTACCAGTCTGCCCTGCTGGGCCAG
CATGCGCTGGTGTACTGCCTGCTGATGTTCGGCGCGCAATACACGCACCGCCGGCTGCTGTGGTTCGGCCCGCTGCTGCA
GGCGTTGCAACTGCTGCCGTTGTTCTTTGCGGCCCATGCGCTTGAACTGCTGCTGCGCGTAGCCATCGGCGGGGGCATCC
TGCCGGGTTTCGAAGGCCTGGTGGCACCGCTGCTGGAGGCCACCCTCTGGCCGCTGGCCAGCTGGGTGCTGCTGGCGCCC
CAGCGCCGCCCGCCCGACCGCGATGAAAACCGGCCGCTGTGA

Upstream 100 bases:

>100_bases
TGTACGGAGCGCGCCATGTGATGGTGCTCAAGCCGGTGGTGGCCGACCTGCCACCGCGCCCCGAACCTGCGCCGGCGGCG
CCCAAGCGCGGGGGCCGCAA

Downstream 100 bases:

>100_bases
GCGCGCAGGGGTGAAGGGCCGCCGCGGATGACCGAACTGCGCAATGCCGAGGCCGATGTCTGGCACTTTCGCCTGCGCGT
GTTCGTCGTGGGCGTGGTGG

Product: rod shape-determining protein mred

Products: NA

Alternate protein names: Rod Shape-Determining MreD Transmembrane Protein; Rod Shape-Determining Protein; MreD Rod Shape-Determining Protein; Rod Shape-Determining MreD; Rod Shape-Determining Protein Mred; Rod Shape-Determining MRED Transmembrane Protein

Number of amino acids: Translated: 173; Mature: 173

Protein sequence:

>173_residues
MIMPKGQQLLLPVNPVFIAASLVAALALNMLPLGRVVWTPDWVMVLLVFWGMHQPQRVGLGVAFLMGLCLDVYQSALLGQ
HALVYCLLMFGAQYTHRRLLWFGPLLQALQLLPLFFAAHALELLLRVAIGGGILPGFEGLVAPLLEATLWPLASWVLLAP
QRRPPDRDENRPL

Sequences:

>Translated_173_residues
MIMPKGQQLLLPVNPVFIAASLVAALALNMLPLGRVVWTPDWVMVLLVFWGMHQPQRVGLGVAFLMGLCLDVYQSALLGQ
HALVYCLLMFGAQYTHRRLLWFGPLLQALQLLPLFFAAHALELLLRVAIGGGILPGFEGLVAPLLEATLWPLASWVLLAP
QRRPPDRDENRPL
>Mature_173_residues
MIMPKGQQLLLPVNPVFIAASLVAALALNMLPLGRVVWTPDWVMVLLVFWGMHQPQRVGLGVAFLMGLCLDVYQSALLGQ
HALVYCLLMFGAQYTHRRLLWFGPLLQALQLLPLFFAAHALELLLRVAIGGGILPGFEGLVAPLLEATLWPLASWVLLAP
QRRPPDRDENRPL

Specific function: Involved In Formation Of The Rod Shape Of The Cell. May Also Contribute To Regulation Of Formation Of Penicillin-Binding Proteins. [C]

COG id: COG2891

COG function: function code M; Cell shape-determining protein

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19176; Mature: 19176

Theoretical pI: Translated: 8.76; Mature: 8.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIMPKGQQLLLPVNPVFIAASLVAALALNMLPLGRVVWTPDWVMVLLVFWGMHQPQRVGL
CCCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHCCCCCHHHHH
GVAFLMGLCLDVYQSALLGQHALVYCLLMFGAQYTHRRLLWFGPLLQALQLLPLFFAAHA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LELLLRVAIGGGILPGFEGLVAPLLEATLWPLASWVLLAPQRRPPDRDENRPL
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MIMPKGQQLLLPVNPVFIAASLVAALALNMLPLGRVVWTPDWVMVLLVFWGMHQPQRVGL
CCCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHCCCCCHHHHH
GVAFLMGLCLDVYQSALLGQHALVYCLLMFGAQYTHRRLLWFGPLLQALQLLPLFFAAHA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LELLLRVAIGGGILPGFEGLVAPLLEATLWPLASWVLLAPQRRPPDRDENRPL
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA