| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
Click here to switch to the map view.
The map label for this gene is 222109423
Identifier: 222109423
GI number: 222109423
Start: 223626
End: 223832
Strand: Direct
Name: 222109423
Synonym: Dtpsy_0202
Alternate gene names: NA
Gene position: 223626-223832 (Clockwise)
Preceding gene: 222109422
Following gene: 222109425
Centisome position: 5.89
GC content: 64.25
Gene sequence:
>207_bases ATGTCGCAAGCAATCGTCGAACTGCTGGCCCAGGACCTCAATCCCCAGGGCGGCGTGTACTGCCCTTCGCCCAAGGCGGA CATGAAGCTCTGGAACGGCCATCCCAAGGTGTACCTGGATGTGGCGCACACAGGGGAGGCCAAGTGCCCGTACTGCGGGA CCGTCTACCGGCTCAAGGCGGGTGAGGTGTTTGCGGGCGGCCACTGA
Upstream 100 bases:
>100_bases CCGCGGCCCGCTGACCGAGAAGATCCAATCGGCCTTCTTCGACATCGTGAACGGCCGCAATCCCAAGTACGCCCACTGGC TCACCAAGGTCTGATCGCCC
Downstream 100 bases:
>100_bases AAGGAAGTCCAAGGCCTCTTCTAGAGGGGCCTGGCGGCGAATAACTCAAGGCCGCTGAAAAGCGCGGTGCCAGATGCTTC CAGGCACCGCACCACCATGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 68; Mature: 67
Protein sequence:
>68_residues MSQAIVELLAQDLNPQGGVYCPSPKADMKLWNGHPKVYLDVAHTGEAKCPYCGTVYRLKAGEVFAGGH
Sequences:
>Translated_68_residues MSQAIVELLAQDLNPQGGVYCPSPKADMKLWNGHPKVYLDVAHTGEAKCPYCGTVYRLKAGEVFAGGH >Mature_67_residues SQAIVELLAQDLNPQGGVYCPSPKADMKLWNGHPKVYLDVAHTGEAKCPYCGTVYRLKAGEVFAGGH
Specific function: Unknown
COG id: COG4391
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7332; Mature: 7201
Theoretical pI: Translated: 7.44; Mature: 7.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 7.4 %Cys+Met (Translated Protein) 4.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQAIVELLAQDLNPQGGVYCPSPKADMKLWNGHPKVYLDVAHTGEAKCPYCGTVYRLKA CCHHHHHHHHHHCCCCCCEECCCCCCCCEEECCCCEEEEEEECCCCCCCCCCCEEEEEEC GEVFAGGH CEEEECCC >Mature Secondary Structure SQAIVELLAQDLNPQGGVYCPSPKADMKLWNGHPKVYLDVAHTGEAKCPYCGTVYRLKA CHHHHHHHHHHCCCCCCEECCCCCCCCEEECCCCEEEEEEECCCCCCCCCCCEEEEEEC GEVFAGGH CEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA