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The map label for this gene is rfaB [C]

Identifier: 222109425

GI number: 222109425

Start: 224883

End: 226016

Strand: Direct

Name: rfaB [C]

Synonym: Dtpsy_0204

Alternate gene names: 222109425

Gene position: 224883-226016 (Clockwise)

Preceding gene: 222109423

Following gene: 222109427

Centisome position: 5.92

GC content: 60.85

Gene sequence:

>1134_bases
ATGGAAAACAATTTGACGGCAGCGCATAAACCCGTCGCACAATGCCCTACACGAGTATTACATTTCGTGACTGGCGGTTT
CTCAGGCGCAACCCAAGTCGCCATCGATCTGTGCCTTGCGGCCCAGAAATGCCCGGACATGGAGGTCATGCTGGTGCTGC
GCCGCAAACGCAGCACTTCCGAGGCCAAGGTTCAGGCTTTGCGCGACCAGGGTTTGCAGGTGCATGTGGTCTCCAATTGG
CTGCATGTATTAACCATATGGGAACTGCGCAAGCTCATTCGAGCTTGGAAGCCCGATGTGGTCTTCGCCCATGGGTTCAG
CGACCACATATGGGGCCGCCGGGCTGCGGTCGCCGAAGGCGTTCCCCAGATCTTTCATGTAGAGCACAACTCGCGCGAAC
GTTACACGCGCCGCCGCCTGAAGCAGGCGCTGGCATTGGCGCCCTTCACGCAGGCCAGCATAGGCGTTTCGGAGGGCGTG
CGCACCAGTCTGATCCAGCGCGGCTTTCCCTCGGACCGTTGCGTAGCCATTTGCAACGGCATCGATCTCGCACGCTTCCC
ACAAGACATGTTGCCGGCCCGCTGGGAAGACCGCGAAGCCGCCATACTTATGGCCTCACGCTTTGCCCGGCAAAAAGACC
ACGTTACCCTGATTCAGGCGCTGGGATTGCTGCGTCAGCAAGGCCTGGCTCCTCGGCTGTATCTGGCCGGGGCGGGCAGC
AAACTCCAGCGCCAGCAAGCCGAGCGGCTTGTTCGGCAGCTCGGCCTGCAGGATCAGGTTCACTTTCTGGGCAATGTCTC
CAACTTGCCCCAGCGGCTAGCCCATACGCAGATTTTTGTACTGTCAACGCATTGGGAAGGCATGCCCCTGGCCTTGGTGG
AGGGAATGGCGGCCGCTTGCGCCTGCATAGGCTCGGATGTGCTGGGCGTACGCGAGGTTATCGCCCATGAAATCAACGGC
CTGCTAGTGCCGCAATCCGATGCCTCTGCCATGGCGGCTGCACTACAGCGGCTGCTACAAAACCCCGCGCTGGCGCGGCA
GTTGGGCGAGGCGGCTCGGAGGCAGGCATTGATCGCCCATGGTCGGGAACATATGTGGGAGCACTATCGTGCGCTGCTGG
TGAAGCCGGGTTAA

Upstream 100 bases:

>100_bases
CCTTAAAAAGGCTGGCTGGAATCCGCGTCATGGTGACTGTTTGAAAAGGTGCAGGGTTGAATACGCAATTTTGTGGCAGG
CGGATTGTCCGTGAGAACCC

Downstream 100 bases:

>100_bases
TAGATCGCAAGGGCAGGATTACAAGGTTTCGGACACATGAGGGGCGTCGCTCTCATGTCTGGCATTGCCCCAGATCAACT
CCATCTTCATCTTGAGCTTG

Product: group 1 glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 377; Mature: 377

Protein sequence:

>377_residues
MENNLTAAHKPVAQCPTRVLHFVTGGFSGATQVAIDLCLAAQKCPDMEVMLVLRRKRSTSEAKVQALRDQGLQVHVVSNW
LHVLTIWELRKLIRAWKPDVVFAHGFSDHIWGRRAAVAEGVPQIFHVEHNSRERYTRRRLKQALALAPFTQASIGVSEGV
RTSLIQRGFPSDRCVAICNGIDLARFPQDMLPARWEDREAAILMASRFARQKDHVTLIQALGLLRQQGLAPRLYLAGAGS
KLQRQQAERLVRQLGLQDQVHFLGNVSNLPQRLAHTQIFVLSTHWEGMPLALVEGMAAACACIGSDVLGVREVIAHEING
LLVPQSDASAMAAALQRLLQNPALARQLGEAARRQALIAHGREHMWEHYRALLVKPG

Sequences:

>Translated_377_residues
MENNLTAAHKPVAQCPTRVLHFVTGGFSGATQVAIDLCLAAQKCPDMEVMLVLRRKRSTSEAKVQALRDQGLQVHVVSNW
LHVLTIWELRKLIRAWKPDVVFAHGFSDHIWGRRAAVAEGVPQIFHVEHNSRERYTRRRLKQALALAPFTQASIGVSEGV
RTSLIQRGFPSDRCVAICNGIDLARFPQDMLPARWEDREAAILMASRFARQKDHVTLIQALGLLRQQGLAPRLYLAGAGS
KLQRQQAERLVRQLGLQDQVHFLGNVSNLPQRLAHTQIFVLSTHWEGMPLALVEGMAAACACIGSDVLGVREVIAHEING
LLVPQSDASAMAAALQRLLQNPALARQLGEAARRQALIAHGREHMWEHYRALLVKPG
>Mature_377_residues
MENNLTAAHKPVAQCPTRVLHFVTGGFSGATQVAIDLCLAAQKCPDMEVMLVLRRKRSTSEAKVQALRDQGLQVHVVSNW
LHVLTIWELRKLIRAWKPDVVFAHGFSDHIWGRRAAVAEGVPQIFHVEHNSRERYTRRRLKQALALAPFTQASIGVSEGV
RTSLIQRGFPSDRCVAICNGIDLARFPQDMLPARWEDREAAILMASRFARQKDHVTLIQALGLLRQQGLAPRLYLAGAGS
KLQRQQAERLVRQLGLQDQVHFLGNVSNLPQRLAHTQIFVLSTHWEGMPLALVEGMAAACACIGSDVLGVREVIAHEING
LLVPQSDASAMAAALQRLLQNPALARQLGEAARRQALIAHGREHMWEHYRALLVKPG

Specific function: Adds A Galactose Goup To A Glucose Group Of Lps. [C]

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: 2.4.1.- [C]

Molecular weight: Translated: 41873; Mature: 41873

Theoretical pI: Translated: 10.53; Mature: 10.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENNLTAAHKPVAQCPTRVLHFVTGGFSGATQVAIDLCLAAQKCPDMEVMLVLRRKRSTS
CCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCH
EAKVQALRDQGLQVHVVSNWLHVLTIWELRKLIRAWKPDVVFAHGFSDHIWGRRAAVAEG
HHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHCCHHHHHHHC
VPQIFHVEHNSRERYTRRRLKQALALAPFTQASIGVSEGVRTSLIQRGFPSDRCVAICNG
CCCEEEECCCCHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHCCCCCCCCEEEECC
IDLARFPQDMLPARWEDREAAILMASRFARQKDHVTLIQALGLLRQQGLAPRLYLAGAGS
CCHHHCCHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEEECCCH
KLQRQQAERLVRQLGLQDQVHFLGNVSNLPQRLAHTQIFVLSTHWEGMPLALVEGMAAAC
HHHHHHHHHHHHHHCCCHHHHHHHCHHHHHHHHHHCEEEEEEECCCCCCHHHHHHHHHHH
ACIGSDVLGVREVIAHEINGLLVPQSDASAMAAALQRLLQNPALARQLGEAARRQALIAH
HHHCCHHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
GREHMWEHYRALLVKPG
HHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MENNLTAAHKPVAQCPTRVLHFVTGGFSGATQVAIDLCLAAQKCPDMEVMLVLRRKRSTS
CCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCH
EAKVQALRDQGLQVHVVSNWLHVLTIWELRKLIRAWKPDVVFAHGFSDHIWGRRAAVAEG
HHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHCCHHHHHHHC
VPQIFHVEHNSRERYTRRRLKQALALAPFTQASIGVSEGVRTSLIQRGFPSDRCVAICNG
CCCEEEECCCCHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHCCCCCCCCEEEECC
IDLARFPQDMLPARWEDREAAILMASRFARQKDHVTLIQALGLLRQQGLAPRLYLAGAGS
CCHHHCCHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEEECCCH
KLQRQQAERLVRQLGLQDQVHFLGNVSNLPQRLAHTQIFVLSTHWEGMPLALVEGMAAAC
HHHHHHHHHHHHHHCCCHHHHHHHCHHHHHHHHHHCEEEEEEECCCCCCHHHHHHHHHHH
ACIGSDVLGVREVIAHEINGLLVPQSDASAMAAALQRLLQNPALARQLGEAARRQALIAH
HHHCCHHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
GREHMWEHYRALLVKPG
HHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Glycosyltransferases; Hexosyltransferases [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]