Definition Acidovorax ebreus TPSY chromosome, complete genome.
Accession NC_011992
Length 3,796,573

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The map label for this gene is 222109404

Identifier: 222109404

GI number: 222109404

Start: 206122

End: 207072

Strand: Direct

Name: 222109404

Synonym: Dtpsy_0183

Alternate gene names: NA

Gene position: 206122-207072 (Clockwise)

Preceding gene: 222109403

Following gene: 222109405

Centisome position: 5.43

GC content: 74.34

Gene sequence:

>951_bases
ATGAACACTGCCTGGACGCCCCTGGCCGCCGCGCCCGCGCAACTCGGCGAATCTCCCTTCTGGCACCCCCTGGAGTCCCG
TCTGTACTGGGTGGACATCGCCGGCCGCGCGCTGTGGCGCAGCGGCGCGCACGGAAGCGATGCGCAATGCTGGCCCCTGC
CGGCCGAGCCCGGCTGCATCGCGCCGGCGCGCCAAGGGGGCACACCCGCAGGTCTCGTGGTGGCGCTGCGCGACCGCATC
TGCCACGCGCCGCGCTGGGGCGGGCCGCTCCTCACGATGGCGCACTTGCCCATCGACCCGGCGACCGAGCGTGCCAACGA
CGGCAAGTGCGACGCGCTCGGGCGCCTGTGGGTGGGCACGGTGCATGAGCCCGCCCAGGGCCCGCGCCAGCCCGTCGCTG
CGCTGTACTGCATCGACCTGCGTGGCCGGGACCAGGGCGGCCCCGATGCTCCCACGGTGCGCCGCATGCTGGACGGCGTG
GCCACCGCCAACGGCCTGGCCTGGTCGCCGGACGGGCGCACGCTGTATTGGAGCGACACGCCCTCGCACACCATCCGCGC
GTGGGACTGCAACGCCCAGTTGGAGCCCATCGGGGCGCCGCGTGTGTTGCACCGCTTTGCGACGCGCGATGAGGCAGTCC
CCTATGGCGGCCGCCCGGACGGTGCCGCCGTGGATGCCGAAGGCGCCTACTGGTGCGCGCTGTACGAGGGCGCGCGCGTG
CTGCGCTTGTCGCCGCGCGGCGAGGTGCTGGCCGAGCTGCCCACGCCGCTGTCCTGCCCCACCATGCCCTGCGTCGGTGG
GCCGGACGGGCACACGCTGTTCGTCACCTCTGCACGCAAGGGCCGCAGTGCCGATGAGCTGGCGCGCTGGCCCCAGTCGG
GGCAGGTGCTGTCCACCCGCGTGGCCGTGGCGGGGTTGCCCGTGGCCTGGTGCGAGATCGGCCAGCGCTGA

Upstream 100 bases:

>100_bases
CCCCGATGACAAGCGAGCAACTCCCTGTCCCTTTTTTGGGCCCGCCCTTGGCGGGCCTTTTCTTTGGGCGGCGCGCAGGC
CCGGGGCCAATAATGCCTGC

Downstream 100 bases:

>100_bases
CCCCTGCGGCGCGCATGGCTGCCAGCGCCATTCACGCCGCGCGTTCAAAAAAATCAAACCTGCGCCACGGCCGCCCGAAA
GGGCAGGGCAGTACCATCGC

Product: smp-30/gluconolaconase/lre domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 316; Mature: 316

Protein sequence:

>316_residues
MNTAWTPLAAAPAQLGESPFWHPLESRLYWVDIAGRALWRSGAHGSDAQCWPLPAEPGCIAPARQGGTPAGLVVALRDRI
CHAPRWGGPLLTMAHLPIDPATERANDGKCDALGRLWVGTVHEPAQGPRQPVAALYCIDLRGRDQGGPDAPTVRRMLDGV
ATANGLAWSPDGRTLYWSDTPSHTIRAWDCNAQLEPIGAPRVLHRFATRDEAVPYGGRPDGAAVDAEGAYWCALYEGARV
LRLSPRGEVLAELPTPLSCPTMPCVGGPDGHTLFVTSARKGRSADELARWPQSGQVLSTRVAVAGLPVAWCEIGQR

Sequences:

>Translated_316_residues
MNTAWTPLAAAPAQLGESPFWHPLESRLYWVDIAGRALWRSGAHGSDAQCWPLPAEPGCIAPARQGGTPAGLVVALRDRI
CHAPRWGGPLLTMAHLPIDPATERANDGKCDALGRLWVGTVHEPAQGPRQPVAALYCIDLRGRDQGGPDAPTVRRMLDGV
ATANGLAWSPDGRTLYWSDTPSHTIRAWDCNAQLEPIGAPRVLHRFATRDEAVPYGGRPDGAAVDAEGAYWCALYEGARV
LRLSPRGEVLAELPTPLSCPTMPCVGGPDGHTLFVTSARKGRSADELARWPQSGQVLSTRVAVAGLPVAWCEIGQR
>Mature_316_residues
MNTAWTPLAAAPAQLGESPFWHPLESRLYWVDIAGRALWRSGAHGSDAQCWPLPAEPGCIAPARQGGTPAGLVVALRDRI
CHAPRWGGPLLTMAHLPIDPATERANDGKCDALGRLWVGTVHEPAQGPRQPVAALYCIDLRGRDQGGPDAPTVRRMLDGV
ATANGLAWSPDGRTLYWSDTPSHTIRAWDCNAQLEPIGAPRVLHRFATRDEAVPYGGRPDGAAVDAEGAYWCALYEGARV
LRLSPRGEVLAELPTPLSCPTMPCVGGPDGHTLFVTSARKGRSADELARWPQSGQVLSTRVAVAGLPVAWCEIGQR

Specific function: Unknown

COG id: COG3386

COG function: function code G; Gluconolactonase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SMP-30/CGR1 family [H]

Homologues:

Organism=Homo sapiens, GI23111021, Length=296, Percent_Identity=31.0810810810811, Blast_Score=130, Evalue=1e-30,
Organism=Homo sapiens, GI4759036, Length=296, Percent_Identity=31.0810810810811, Blast_Score=130, Evalue=1e-30,
Organism=Drosophila melanogaster, GI45551448, Length=289, Percent_Identity=26.2975778546713, Blast_Score=96, Evalue=2e-20,
Organism=Drosophila melanogaster, GI24641471, Length=289, Percent_Identity=26.2975778546713, Blast_Score=96, Evalue=2e-20,
Organism=Drosophila melanogaster, GI18860103, Length=289, Percent_Identity=26.2975778546713, Blast_Score=96, Evalue=2e-20,
Organism=Drosophila melanogaster, GI24641469, Length=289, Percent_Identity=26.2975778546713, Blast_Score=96, Evalue=2e-20,
Organism=Drosophila melanogaster, GI24646912, Length=278, Percent_Identity=27.3381294964029, Blast_Score=96, Evalue=3e-20,
Organism=Drosophila melanogaster, GI24646910, Length=278, Percent_Identity=27.3381294964029, Blast_Score=96, Evalue=3e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011042
- InterPro:   IPR013658
- InterPro:   IPR005511 [H]

Pfam domain/function: PF08450 SGL [H]

EC number: NA

Molecular weight: Translated: 33840; Mature: 33840

Theoretical pI: Translated: 7.16; Mature: 7.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTAWTPLAAAPAQLGESPFWHPLESRLYWVDIAGRALWRSGAHGSDAQCWPLPAEPGCI
CCCCCCCHHHCHHHHCCCCCCCCHHCCEEEEEECCHHHHCCCCCCCCCEEEECCCCCCCC
APARQGGTPAGLVVALRDRICHAPRWGGPLLTMAHLPIDPATERANDGKCDALGRLWVGT
CCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHEEECC
VHEPAQGPRQPVAALYCIDLRGRDQGGPDAPTVRRMLDGVATANGLAWSPDGRTLYWSDT
CCCCCCCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCEECCCCCEEEECCC
PSHTIRAWDCNAQLEPIGAPRVLHRFATRDEAVPYGGRPDGAAVDAEGAYWCALYEGARV
CCCEEEEEECCCEECCCCCHHHHHHHHHCCCCCCCCCCCCCCEEECCCCEEEEEECCCEE
LRLSPRGEVLAELPTPLSCPTMPCVGGPDGHTLFVTSARKGRSADELARWPQSGQVLSTR
EEECCCCCCHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHCCCCCCEEEEE
VAVAGLPVAWCEIGQR
HHHHCCCHHHHHCCCC
>Mature Secondary Structure
MNTAWTPLAAAPAQLGESPFWHPLESRLYWVDIAGRALWRSGAHGSDAQCWPLPAEPGCI
CCCCCCCHHHCHHHHCCCCCCCCHHCCEEEEEECCHHHHCCCCCCCCCEEEECCCCCCCC
APARQGGTPAGLVVALRDRICHAPRWGGPLLTMAHLPIDPATERANDGKCDALGRLWVGT
CCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHEEECC
VHEPAQGPRQPVAALYCIDLRGRDQGGPDAPTVRRMLDGVATANGLAWSPDGRTLYWSDT
CCCCCCCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCEECCCCCEEEECCC
PSHTIRAWDCNAQLEPIGAPRVLHRFATRDEAVPYGGRPDGAAVDAEGAYWCALYEGARV
CCCEEEEEECCCEECCCCCHHHHHHHHHCCCCCCCCCCCCCCEEECCCCEEEEEECCCEE
LRLSPRGEVLAELPTPLSCPTMPCVGGPDGHTLFVTSARKGRSADELARWPQSGQVLSTR
EEECCCCCCHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHCCCCCCEEEEE
VAVAGLPVAWCEIGQR
HHHHCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA