| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is catB1 [H]
Identifier: 222109379
GI number: 222109379
Start: 176722
End: 177924
Strand: Direct
Name: catB1 [H]
Synonym: Dtpsy_0158
Alternate gene names: 222109379
Gene position: 176722-177924 (Clockwise)
Preceding gene: 222109377
Following gene: 222109380
Centisome position: 4.65
GC content: 70.99
Gene sequence:
>1203_bases ATGACGACTTCTCCTTCCGCTTCCGTGCTGCGCATCGAACGCATCCAGGCACGCATCCTGGACATCCCCACGATCCGCCC GCACAAGCTCTCGTTCGGCGCCATCCAGCGCCAGAGCCCCGTGATCGTGCAGCTGTGGCTGAGCGATGGCGCCAGCGGCT TCGGCGAGGCCGCGACCATCGGCGGCCCCTCGTGGAACGAGGAATCGCCCGAGAGCATCCGGCATGCCATCGACAGCTAC CTCGCGCCTGCCGTGATCGGCCAGGACGCGGGCCGCTTCGAGCAGTTGCTGCAGCGCATGGACCTGGCCTGCAAGGGCAA CCGCTTTGCCAAGAGCGCCGTGGAGCAGGCCGCCATCGACGCCGTGGCGCGCAGCCTGGGCCTGCCCGTGTGGCAACTGC TGGGCGGCAAGCAGCGCGAGAGCCTGCCCCTGGCCTGGACGCTGGCCAGCGGCGACTCCGCCAAGGACATCGAGGAGGCC GAGAAGATGCTGGCCGCGCGCCGCCACCGCATCTTCAAGCTGAAGATCGGCGCACGCGCGCCACAGGAGGACGTGGCGCA CGTGGCACGCATCGCCCGCGCGCTGGACGGCCGCGCCAGCATGACGGTGGACGTGAACCAGGCCTGGGACGGCGCCACCG CGCGCCGCTACCTGCCCGAGATGATCGACGCCGGTGTGGGTCTGATCGAGCAGCCCGTGGCCCAGTGGAACGAGGAGGCG CTGCGCCAGCTCACCGCCACGCTGCCCCACACCGCGCTGGTGATGGCCGACGAGACCGTCTGCACGCCGCAGGACGCGAT GCGCCTGGCGCGCCATAACGCCTGCCATGTGTTCTCGCTCAAGATCGCCAAGCACGGCGGCCTGCTGCGCACGCGCGCCG TGGCCGACGTGGCGCGCGCCGCCGACATCGGCTGGTACGGCGGCACGATGCTGGAGACCTCCGTCGGCAGCGCCGCCTCG GCCCATGTGTTTGCCACGCTGGGCGGCACGCACCACAACTGCGAGCTGTTCGGCCCGCAGCTGCTGGTAGACGACATCGT GGAGCAGCAGATGGTCCTTTCCGACTTCGCGCTGCAGTTGCCCGACGGGCCGGGCTTCGGCCTCACCGTGGTGCCCGAGC GGCTCGACCGCTTCGACCGTGCACGCCAGGGCCTCACGCCCGTGCACGTGGACCTGGGCCGCGCCAGCGCGCAGCCCGCC TGA
Upstream 100 bases:
>100_bases TGGCGTCGAACAAAAACTGCAATATATCTCATTGGATTCGCCCCGATGCCAGCGCTAAGGTCATGGCCCGTAACGCTTTT TTCGCCACGGCCCGCTTTCC
Downstream 100 bases:
>100_bases ACCCTTTTTTTTGCCAGGAGAAACCCAGATGCTGTTCCTCGTTCGCATGGATGTGAAGATTCCCCACGACCTGCCCGCCG CGCAGGCCGACGAAATCAAG
Product: muconate and chloromuconate cycloisomerase
Products: NA
Alternate protein names: Cis,cis-muconate lactonizing enzyme I 1; MLE 1; Muconate cycloisomerase I 1 [H]
Number of amino acids: Translated: 400; Mature: 399
Protein sequence:
>400_residues MTTSPSASVLRIERIQARILDIPTIRPHKLSFGAIQRQSPVIVQLWLSDGASGFGEAATIGGPSWNEESPESIRHAIDSY LAPAVIGQDAGRFEQLLQRMDLACKGNRFAKSAVEQAAIDAVARSLGLPVWQLLGGKQRESLPLAWTLASGDSAKDIEEA EKMLAARRHRIFKLKIGARAPQEDVAHVARIARALDGRASMTVDVNQAWDGATARRYLPEMIDAGVGLIEQPVAQWNEEA LRQLTATLPHTALVMADETVCTPQDAMRLARHNACHVFSLKIAKHGGLLRTRAVADVARAADIGWYGGTMLETSVGSAAS AHVFATLGGTHHNCELFGPQLLVDDIVEQQMVLSDFALQLPDGPGFGLTVVPERLDRFDRARQGLTPVHVDLGRASAQPA
Sequences:
>Translated_400_residues MTTSPSASVLRIERIQARILDIPTIRPHKLSFGAIQRQSPVIVQLWLSDGASGFGEAATIGGPSWNEESPESIRHAIDSY LAPAVIGQDAGRFEQLLQRMDLACKGNRFAKSAVEQAAIDAVARSLGLPVWQLLGGKQRESLPLAWTLASGDSAKDIEEA EKMLAARRHRIFKLKIGARAPQEDVAHVARIARALDGRASMTVDVNQAWDGATARRYLPEMIDAGVGLIEQPVAQWNEEA LRQLTATLPHTALVMADETVCTPQDAMRLARHNACHVFSLKIAKHGGLLRTRAVADVARAADIGWYGGTMLETSVGSAAS AHVFATLGGTHHNCELFGPQLLVDDIVEQQMVLSDFALQLPDGPGFGLTVVPERLDRFDRARQGLTPVHVDLGRASAQPA >Mature_399_residues TTSPSASVLRIERIQARILDIPTIRPHKLSFGAIQRQSPVIVQLWLSDGASGFGEAATIGGPSWNEESPESIRHAIDSYL APAVIGQDAGRFEQLLQRMDLACKGNRFAKSAVEQAAIDAVARSLGLPVWQLLGGKQRESLPLAWTLASGDSAKDIEEAE KMLAARRHRIFKLKIGARAPQEDVAHVARIARALDGRASMTVDVNQAWDGATARRYLPEMIDAGVGLIEQPVAQWNEEAL RQLTATLPHTALVMADETVCTPQDAMRLARHNACHVFSLKIAKHGGLLRTRAVADVARAADIGWYGGTMLETSVGSAASA HVFATLGGTHHNCELFGPQLLVDDIVEQQMVLSDFALQLPDGPGFGLTVVPERLDRFDRARQGLTPVHVDLGRASAQPA
Specific function: Catalyzes a syn cycloisomerization [H]
COG id: COG4948
COG function: function code MR; L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mandelate racemase/muconate lactonizing enzyme family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013370 - InterPro: IPR018110 - InterPro: IPR013342 - InterPro: IPR013341 - InterPro: IPR001354 [H]
Pfam domain/function: PF01188 MR_MLE; PF02746 MR_MLE_N [H]
EC number: =5.5.1.1 [H]
Molecular weight: Translated: 43206; Mature: 43075
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: PS00908 MR_MLE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTSPSASVLRIERIQARILDIPTIRPHKLSFGAIQRQSPVIVQLWLSDGASGFGEAATI CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCEEEEEEECCCCCCCCCCCCC GGPSWNEESPESIRHAIDSYLAPAVIGQDAGRFEQLLQRMDLACKGNRFAKSAVEQAAID CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHCCCHHHHHHHHHHHHH AVARSLGLPVWQLLGGKQRESLPLAWTLASGDSAKDIEEAEKMLAARRHRIFKLKIGARA HHHHHHCCHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCEEEEEEECCCC PQEDVAHVARIARALDGRASMTVDVNQAWDGATARRYLPEMIDAGVGLIEQPVAQWNEEA CHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHH LRQLTATLPHTALVMADETVCTPQDAMRLARHNACHVFSLKIAKHGGLLRTRAVADVARA HHHHHHHCCCEEEEEECCCCCCCHHHHHHHHCCCEEEEEEEEHHCCCCHHHHHHHHHHHH ADIGWYGGTMLETSVGSAASAHVFATLGGTHHNCELFGPQLLVDDIVEQQMVLSDFALQL HCCCCCCCCCEECCCCCCCCCEEEEEECCCCCCCEECCHHHHHHHHHHHHHHHHHHHHCC PDGPGFGLTVVPERLDRFDRARQGLTPVHVDLGRASAQPA CCCCCCCEEECHHHHHHHHHHHHCCCEEEEECCCCCCCCC >Mature Secondary Structure TTSPSASVLRIERIQARILDIPTIRPHKLSFGAIQRQSPVIVQLWLSDGASGFGEAATI CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCEEEEEEECCCCCCCCCCCCC GGPSWNEESPESIRHAIDSYLAPAVIGQDAGRFEQLLQRMDLACKGNRFAKSAVEQAAID CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHCCCHHHHHHHHHHHHH AVARSLGLPVWQLLGGKQRESLPLAWTLASGDSAKDIEEAEKMLAARRHRIFKLKIGARA HHHHHHCCHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCEEEEEEECCCC PQEDVAHVARIARALDGRASMTVDVNQAWDGATARRYLPEMIDAGVGLIEQPVAQWNEEA CHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHH LRQLTATLPHTALVMADETVCTPQDAMRLARHNACHVFSLKIAKHGGLLRTRAVADVARA HHHHHHHCCCEEEEEECCCCCCCHHHHHHHHCCCEEEEEEEEHHCCCCHHHHHHHHHHHH ADIGWYGGTMLETSVGSAASAHVFATLGGTHHNCELFGPQLLVDDIVEQQMVLSDFALQL HCCCCCCCCCEECCCCCCCCCEEEEEECCCCCCCEECCHHHHHHHHHHHHHHHHHHHHCC PDGPGFGLTVVPERLDRFDRARQGLTPVHVDLGRASAQPA CCCCCCCEEECHHHHHHHHHHHHCCCEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9473520; 9260969 [H]