| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is 222109377
Identifier: 222109377
GI number: 222109377
Start: 175114
End: 175602
Strand: Direct
Name: 222109377
Synonym: Dtpsy_0156
Alternate gene names: NA
Gene position: 175114-175602 (Clockwise)
Preceding gene: 222109372
Following gene: 222109379
Centisome position: 4.61
GC content: 67.48
Gene sequence:
>489_bases ATGAGTGCAACAACACATGCGGTCGGCCTGCAGGGGCCGAAGCGCCGGGTGGTCTTTGTCACCCTTTACGAAATCATCGC GATCATCGTCTCCAGCCTGCTCTTCATGGCCATTGGCCAGGGCGCGGGCGCTTCGGGGGTGATGGCCGTCGTCGCGTCCG CGCTGGCCATCGCCTGGAACGTGACCTTCAACGCCCTGTTCGAGCGCTGGGAGGCGCGCCAGCGCGTCAAGGGCCGCTCC GTACTGCGGCGCGTGGTGCACGCCGTGGGCTTCGAGGGCGGTCTGGCGCTGGTCCTCATCCCGCTGATGGCCTGGTGGTT CGGCGTGAGCCTGTGGCAGGCCACGGTGATGGAGGCCGGCCTGCTGCTGTTTTTCCTTGTCTACACCTACGCCTTCAATT GGGCGTTCGACCGCGTCTACGGCCTGCCGGCATCGGCCCAGGCCATGCCTGCTGCCGCGCCCGCGGGGGCTGTGGTAGGC GCTCCTTAG
Upstream 100 bases:
>100_bases ACGAGGACGTTGTCGGAAGTGAAGGCCATGCGCCAATCTATCAATATTTCTGAAAGAAGATGACTTTTTCCTTCAGATTT CACTCCCTATACTGCGCCGC
Downstream 100 bases:
>100_bases TTCATAGCTGCTTGCGCTTGACTGGTAAGCGCTAGAGCCATTTTTTACTCTTGTTGTGCAACACCGCCCTGCAGGGAAGG CGGAGCAGCGGTGCGTGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Pair Domain Protein; Transmembrane Pair; Transmembrane Pair Permease Of Facilitator Superfamily; Transmembrane Pair Family Protein; Bacterial Transmembrane Pair Family; Transmembrane Pair Protein; Transmembrane Protein; Bacterial Transmembrane Pair Family Protein
Number of amino acids: Translated: 162; Mature: 161
Protein sequence:
>162_residues MSATTHAVGLQGPKRRVVFVTLYEIIAIIVSSLLFMAIGQGAGASGVMAVVASALAIAWNVTFNALFERWEARQRVKGRS VLRRVVHAVGFEGGLALVLIPLMAWWFGVSLWQATVMEAGLLLFFLVYTYAFNWAFDRVYGLPASAQAMPAAAPAGAVVG AP
Sequences:
>Translated_162_residues MSATTHAVGLQGPKRRVVFVTLYEIIAIIVSSLLFMAIGQGAGASGVMAVVASALAIAWNVTFNALFERWEARQRVKGRS VLRRVVHAVGFEGGLALVLIPLMAWWFGVSLWQATVMEAGLLLFFLVYTYAFNWAFDRVYGLPASAQAMPAAAPAGAVVG AP >Mature_161_residues SATTHAVGLQGPKRRVVFVTLYEIIAIIVSSLLFMAIGQGAGASGVMAVVASALAIAWNVTFNALFERWEARQRVKGRSV LRRVVHAVGFEGGLALVLIPLMAWWFGVSLWQATVMEAGLLLFFLVYTYAFNWAFDRVYGLPASAQAMPAAAPAGAVVGA P
Specific function: Unknown
COG id: COG4125
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17328; Mature: 17196
Theoretical pI: Translated: 10.63; Mature: 10.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSATTHAVGLQGPKRRVVFVTLYEIIAIIVSSLLFMAIGQGAGASGVMAVVASALAIAWN CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH VTFNALFERWEARQRVKGRSVLRRVVHAVGFEGGLALVLIPLMAWWFGVSLWQATVMEAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LLLFFLVYTYAFNWAFDRVYGLPASAQAMPAAAPAGAVVGAP HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SATTHAVGLQGPKRRVVFVTLYEIIAIIVSSLLFMAIGQGAGASGVMAVVASALAIAWN CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH VTFNALFERWEARQRVKGRSVLRRVVHAVGFEGGLALVLIPLMAWWFGVSLWQATVMEAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LLLFFLVYTYAFNWAFDRVYGLPASAQAMPAAAPAGAVVGAP HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA