Definition Acidovorax ebreus TPSY chromosome, complete genome.
Accession NC_011992
Length 3,796,573

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The map label for this gene is 222109366

Identifier: 222109366

GI number: 222109366

Start: 163679

End: 164656

Strand: Direct

Name: 222109366

Synonym: Dtpsy_0145

Alternate gene names: NA

Gene position: 163679-164656 (Clockwise)

Preceding gene: 222109365

Following gene: 222109367

Centisome position: 4.31

GC content: 70.04

Gene sequence:

>978_bases
ATGCATTCCACCACCTCCCGCCGCAGCTTCATCGCCGGCAGCCTGCTTGCCGCCGCCCATCCGCTGGCGGCGCTCGCGGC
CGACCCCTGGCCCAGCAAGCCCGTGCGCTTCATCGTGCCGTTCCCGCCCGGCGGCCCGGTGGACACCACCGCCCGCGTCT
TCAGCCACAGGCTGTCCGAGATCTGGAAGACGCCCACCGTCATCGACAACCGCGCCGGCGCGGGCGGCGTGGTGGGCGCC
ACGGCCGCCGCCAAGGAGGCACCCGACGGTTACGGCCTCTTCGTGGGTGCCATCCACCACTCGGTCAACCCCTCGTTGAT
GGGCAAGCTGCCCTACGACATCGAGAAGGACTTCGCGCCCATCAGCTTCGCGGCCATGTTCCCCGTGTTCATCGTGGCGC
ACCCCTCGGTGCCGGCCAACACCATCCAGGAGCTGATCGCGCTGGCCAAGAAGGGCACGCCGCTGGCCTATGGCTCGTCG
GGCAACGGGGGCGGCACGCACCTGGCGGGCGAGCTGTTCAACATGGAGGCGGGGACCAAGCTGCAGCACATTCCCTACAA
GGGCAGCGCCCCCGCGATGAACGACCTGCTGGGCGGCCAGGTGCAGCTCATGTTCAGCGACGCACCCACGGCGCTGCAGC
ACATCAAGAGCGGCCGCGTGAAGGTGCTGGGCGTGGCCAGCCGCCAGCGCTCGGCCATGCTGCCCGACGTGCCCACGGGC
GTGGAATCGGGTCTGCCGGGCTATGAGGCGTATTCGTGGGCCGCGCTGTTCGCGCCCGCCAAGACGCCCCAGGCCGTGCT
GGACAAGATCAACGCCGACTTCAACACCGCGATGAAAGACCCCGCCGTGCGCCAGCGCCTGCTGGACGCCGGCGCCGAGG
CCGATCCCGGCACGCAGGAGCAGATGCGCCAGCGTCTGCGCGGCGAGCTGGACAAGTGGGCCAAGGTGATCAAGACGGCG
GGGATCACGCCGGGTTGA

Upstream 100 bases:

>100_bases
CCTGAGCGAACTGCCCACCAATACCAACGGCAAGGTGCTCAAGCGCACCTTGAAAGACCAGGCCTTGTGCCTGACCACCT
GAACGATAGGAGACACACCA

Downstream 100 bases:

>100_bases
TGCCGCGGCGAAGACGCCCTTTCAGATTGTCGAATTGAAGTGATGCGGTGGCCGGGGCATGCTGTGCCTCGTCCTCCGAA
GACTCGAAGAATCCCATGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 325; Mature: 325

Protein sequence:

>325_residues
MHSTTSRRSFIAGSLLAAAHPLAALAADPWPSKPVRFIVPFPPGGPVDTTARVFSHRLSEIWKTPTVIDNRAGAGGVVGA
TAAAKEAPDGYGLFVGAIHHSVNPSLMGKLPYDIEKDFAPISFAAMFPVFIVAHPSVPANTIQELIALAKKGTPLAYGSS
GNGGGTHLAGELFNMEAGTKLQHIPYKGSAPAMNDLLGGQVQLMFSDAPTALQHIKSGRVKVLGVASRQRSAMLPDVPTG
VESGLPGYEAYSWAALFAPAKTPQAVLDKINADFNTAMKDPAVRQRLLDAGAEADPGTQEQMRQRLRGELDKWAKVIKTA
GITPG

Sequences:

>Translated_325_residues
MHSTTSRRSFIAGSLLAAAHPLAALAADPWPSKPVRFIVPFPPGGPVDTTARVFSHRLSEIWKTPTVIDNRAGAGGVVGA
TAAAKEAPDGYGLFVGAIHHSVNPSLMGKLPYDIEKDFAPISFAAMFPVFIVAHPSVPANTIQELIALAKKGTPLAYGSS
GNGGGTHLAGELFNMEAGTKLQHIPYKGSAPAMNDLLGGQVQLMFSDAPTALQHIKSGRVKVLGVASRQRSAMLPDVPTG
VESGLPGYEAYSWAALFAPAKTPQAVLDKINADFNTAMKDPAVRQRLLDAGAEADPGTQEQMRQRLRGELDKWAKVIKTA
GITPG
>Mature_325_residues
MHSTTSRRSFIAGSLLAAAHPLAALAADPWPSKPVRFIVPFPPGGPVDTTARVFSHRLSEIWKTPTVIDNRAGAGGVVGA
TAAAKEAPDGYGLFVGAIHHSVNPSLMGKLPYDIEKDFAPISFAAMFPVFIVAHPSVPANTIQELIALAKKGTPLAYGSS
GNGGGTHLAGELFNMEAGTKLQHIPYKGSAPAMNDLLGGQVQLMFSDAPTALQHIKSGRVKVLGVASRQRSAMLPDVPTG
VESGLPGYEAYSWAALFAPAKTPQAVLDKINADFNTAMKDPAVRQRLLDAGAEADPGTQEQMRQRLRGELDKWAKVIKTA
GITPG

Specific function: Unknown

COG id: COG3181

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0065 (bug) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005064 [H]

Pfam domain/function: PF03401 Bug [H]

EC number: NA

Molecular weight: Translated: 34187; Mature: 34187

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHSTTSRRSFIAGSLLAAAHPLAALAADPWPSKPVRFIVPFPPGGPVDTTARVFSHRLSE
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHH
IWKTPTVIDNRAGAGGVVGATAAAKEAPDGYGLFVGAIHHSVNPSLMGKLPYDIEKDFAP
HHCCCCEECCCCCCCCCCCCHHHHHCCCCCCEEEEEHHHHCCCHHHHCCCCCCCCCCCCC
ISFAAMFPVFIVAHPSVPANTIQELIALAKKGTPLAYGSSGNGGGTHLAGELFNMEAGTK
HHHHHHHHHHEEECCCCCHHHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHCCCCCCE
LQHIPYKGSAPAMNDLLGGQVQLMFSDAPTALQHIKSGRVKVLGVASRQRSAMLPDVPTG
EEECCCCCCCCHHHHHCCCEEEEEECCCHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCC
VESGLPGYEAYSWAALFAPAKTPQAVLDKINADFNTAMKDPAVRQRLLDAGAEADPGTQE
HHCCCCCCHHHHHHHEECCCCCHHHHHHHHCCCHHHHHCCHHHHHHHHHCCCCCCCCCHH
QMRQRLRGELDKWAKVIKTAGITPG
HHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MHSTTSRRSFIAGSLLAAAHPLAALAADPWPSKPVRFIVPFPPGGPVDTTARVFSHRLSE
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHH
IWKTPTVIDNRAGAGGVVGATAAAKEAPDGYGLFVGAIHHSVNPSLMGKLPYDIEKDFAP
HHCCCCEECCCCCCCCCCCCHHHHHCCCCCCEEEEEHHHHCCCHHHHCCCCCCCCCCCCC
ISFAAMFPVFIVAHPSVPANTIQELIALAKKGTPLAYGSSGNGGGTHLAGELFNMEAGTK
HHHHHHHHHHEEECCCCCHHHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHCCCCCCE
LQHIPYKGSAPAMNDLLGGQVQLMFSDAPTALQHIKSGRVKVLGVASRQRSAMLPDVPTG
EEECCCCCCCCHHHHHCCCEEEEEECCCHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCC
VESGLPGYEAYSWAALFAPAKTPQAVLDKINADFNTAMKDPAVRQRLLDAGAEADPGTQE
HHCCCCCCHHHHHHHEECCCCCHHHHHHHHCCCHHHHHCCHHHHHHHHHCCCCCCCCCHH
QMRQRLRGELDKWAKVIKTAGITPG
HHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2013566 [H]