Definition Acidovorax ebreus TPSY chromosome, complete genome.
Accession NC_011992
Length 3,796,573

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The map label for this gene is 222109367

Identifier: 222109367

GI number: 222109367

Start: 164752

End: 165135

Strand: Direct

Name: 222109367

Synonym: Dtpsy_0146

Alternate gene names: NA

Gene position: 164752-165135 (Clockwise)

Preceding gene: 222109366

Following gene: 222109368

Centisome position: 4.34

GC content: 69.53

Gene sequence:

>384_bases
ATGCACCTGAGCGCACAGACCCACTACCAGGCCGAGCTGGATGCCGGCCGCTTTTGCCTGCAGCACTGTCCGCAGTGCAA
GAACCACGTATTCACGCCGCGCGAGCTGTGCCCGCATTGCGGCGCCAGCCCGCTGCGCTGGGTGCGCGCCAGCGGCCTGG
GCACCGTGTATTCCGCCACCACCATCGCACGCAAGGCGGACGCGGGGGGCAACTACAACGTCGCGCTGATCGATCTGGAT
GAAGGCGTGCGCATGATGAGCCGCGTGGAGGGCGTGGCGCCCGAAGACGTGCGCATCGGCCAGCGGGTGCAGGCCCGCGT
GGCGCAGAAGGACGGGCGTGGCCTGGTGCTGTTCCAGCCCGCAGCGCAAGGGGGTGCCGCATGA

Upstream 100 bases:

>100_bases
GTTGATGCCGCGGCGAAGACGCCCTTTCAGATTGTCGAATTGAAGTGATGCGGTGGCCGGGGCATGCTGTGCCTCGTCCT
CCGAAGACTCGAAGAATCCC

Downstream 100 bases:

>100_bases
GCCGCGTTCCGCAATCCCCCCTGGACGCCGCCGCCGTGAACCGGCCGCTGCGCGGCCGCGCAGCCATCGTCGGCGCCGCC
ACCTACGGCTGCGGCGAGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MHLSAQTHYQAELDAGRFCLQHCPQCKNHVFTPRELCPHCGASPLRWVRASGLGTVYSATTIARKADAGGNYNVALIDLD
EGVRMMSRVEGVAPEDVRIGQRVQARVAQKDGRGLVLFQPAAQGGAA

Sequences:

>Translated_127_residues
MHLSAQTHYQAELDAGRFCLQHCPQCKNHVFTPRELCPHCGASPLRWVRASGLGTVYSATTIARKADAGGNYNVALIDLD
EGVRMMSRVEGVAPEDVRIGQRVQARVAQKDGRGLVLFQPAAQGGAA
>Mature_127_residues
MHLSAQTHYQAELDAGRFCLQHCPQCKNHVFTPRELCPHCGASPLRWVRASGLGTVYSATTIARKADAGGNYNVALIDLD
EGVRMMSRVEGVAPEDVRIGQRVQARVAQKDGRGLVLFQPAAQGGAA

Specific function: Unknown

COG id: COG1545

COG function: function code R; Predicted nucleic-acid-binding protein containing a Zn-ribbon

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13700; Mature: 13700

Theoretical pI: Translated: 8.50; Mature: 8.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
3.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHLSAQTHYQAELDAGRFCLQHCPQCKNHVFTPRELCPHCGASPLRWVRASGLGTVYSAT
CCCCCCCCCHHHCCHHHHHHHCCHHHHHCCCCHHHHHHCCCCCHHHHHHHCCCCCHHHHH
TIARKADAGGNYNVALIDLDEGVRMMSRVEGVAPEDVRIGQRVQARVAQKDGRGLVLFQP
HHHHHCCCCCCCEEEEEECCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCEEEEECC
AAQGGAA
CCCCCCC
>Mature Secondary Structure
MHLSAQTHYQAELDAGRFCLQHCPQCKNHVFTPRELCPHCGASPLRWVRASGLGTVYSAT
CCCCCCCCCHHHCCHHHHHHHCCHHHHHCCCCHHHHHHCCCCCHHHHHHHCCCCCHHHHH
TIARKADAGGNYNVALIDLDEGVRMMSRVEGVAPEDVRIGQRVQARVAQKDGRGLVLFQP
HHHHHCCCCCCCEEEEEECCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCEEEEECC
AAQGGAA
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA