| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
Click here to switch to the map view.
The map label for this gene is 222109360
Identifier: 222109360
GI number: 222109360
Start: 156417
End: 157310
Strand: Direct
Name: 222109360
Synonym: Dtpsy_0139
Alternate gene names: NA
Gene position: 156417-157310 (Clockwise)
Preceding gene: 222109359
Following gene: 222109361
Centisome position: 4.12
GC content: 72.04
Gene sequence:
>894_bases ATGGCCATTGACTATCACCACCTGAAGGCGCGCGATTTTGGCGTGATCCGCCAGACGTACACCGAGCGCGACACCATGCT TTACGCGCTCAGCCTCGGGCTGGGCAACGATCCGCTGAACGCCAGCGCGCTGCCCTTCGTCTACGAGGGGCTGGAAGGCG GCCTGCGCGCCCTGCCGTCGCAGGCCGTGGTGCTGGGCTACCCGGGCTTCTGGGCGCGCGAGCCGGACACGGGCATCGAC TGGGTCAAGCTCCTGCACGGCGAGCAGCGCATGCGCCTGCACCGCCCGCTGCCCGCGAGCGGCGAGGTCGTGGGCCACAA CCGCATCACGCACCTGACCGACAAGGGCGAGGGCAAGGGCGCCATCATGGTGACCGAGCGGCGCCTGGAAACCGCCGCCG GCGAGCTGCTGGCCACCGTGCAGCAGGTGACCTTTCTGCGCGGGGATGGCGGCTACAGCCAGCAGGGCGGCGGCCAGCCC AGCGACGCACCGCTGCCCGCGCTGCAGCCCACGCCGCAGGACCGCGCGCCCGACTTCACCGACACCCAGCCCACCCGCCC CGAGGCGGCGCTGCTCTACCGCCTGATGGGCGACTACAACCCGCTGCACGCCGACCCGGCCGTGGCCGCCAAGGCCGGCT TCGAGCGCCCCATCCTGCACGGGCTGGCCAGCTACGGCCTGGTGGCGCATGCGGTGTTGCGCCAGTGCTGCGCCGGCGAT CCCGCGCGCCTCAAGGCGATGGACATCCGCTTCGCCGCCCCGGTGTACCCGGGCGAGACGTTGGTGACCGAGATCTGGCG CGTGCCCGGCCAACCGGCGCAGGTGCAGCTGCGCGCCCGTGTGCTCGAACGCGACAAGGTGGTGCTGAGCCACGGCTTCG CCGAACTGGCGTGA
Upstream 100 bases:
>100_bases GGGCGGCGCGGCCAGCCCAGGCCCTTGCGCGGTGGCCGCTGGCCTGGGGACGCGCCAGTTGCATGGCGCGCTGGCAATCA CAACCTTATGGACAACTGAG
Downstream 100 bases:
>100_bases GCTATCAAAAAGTGAGCTGTCGGCGCTTCATAGGTAAGCGCTGGAGCTCGTTCTGAATCAAATACCCTGGAGCACGCCAT GAGCGCATCCCCCGTGTTGA
Product: 3-alpha,7-alpha, 12-alpha-trihydroxy-5-beta-cholest-24-enoyl-coahydratase
Products: NA
Alternate protein names: 3-Alpha 7-Alpha; MaoC-Like Dehydratase; Dehydrogenase; Acyl Dehydratase; UfaA2 Protein; MaoC-Like Domain-Containing; Enoyl-CoA Hydratase; Short-Chain Dehydrogenase/Reductase SDR; MaoC Family Protein; Hydratase; -Specific Enoyl-CoA Hydratase; 2-Enoyl Acyl-CoA Hydratase; MaoC Acyl Dehydratase; MaoC Domain-Containing Protein Dehydratase; MaoC Family Dehydratase; Enoyl-CoA Hydratase/3-Hydroxyacyl-CoA Dehydratase; MaoC Like Dehydratase/Enoyl-CoA Hydratase; MaoC-Like-Specific Enoyl-CoA Hydratase; MaoC-Like Domain-Containing Protein; MaoC Family Dehydrogenase/Dehydratase; MaoC Like Domain Protein
Number of amino acids: Translated: 297; Mature: 296
Protein sequence:
>297_residues MAIDYHHLKARDFGVIRQTYTERDTMLYALSLGLGNDPLNASALPFVYEGLEGGLRALPSQAVVLGYPGFWAREPDTGID WVKLLHGEQRMRLHRPLPASGEVVGHNRITHLTDKGEGKGAIMVTERRLETAAGELLATVQQVTFLRGDGGYSQQGGGQP SDAPLPALQPTPQDRAPDFTDTQPTRPEAALLYRLMGDYNPLHADPAVAAKAGFERPILHGLASYGLVAHAVLRQCCAGD PARLKAMDIRFAAPVYPGETLVTEIWRVPGQPAQVQLRARVLERDKVVLSHGFAELA
Sequences:
>Translated_297_residues MAIDYHHLKARDFGVIRQTYTERDTMLYALSLGLGNDPLNASALPFVYEGLEGGLRALPSQAVVLGYPGFWAREPDTGID WVKLLHGEQRMRLHRPLPASGEVVGHNRITHLTDKGEGKGAIMVTERRLETAAGELLATVQQVTFLRGDGGYSQQGGGQP SDAPLPALQPTPQDRAPDFTDTQPTRPEAALLYRLMGDYNPLHADPAVAAKAGFERPILHGLASYGLVAHAVLRQCCAGD PARLKAMDIRFAAPVYPGETLVTEIWRVPGQPAQVQLRARVLERDKVVLSHGFAELA >Mature_296_residues AIDYHHLKARDFGVIRQTYTERDTMLYALSLGLGNDPLNASALPFVYEGLEGGLRALPSQAVVLGYPGFWAREPDTGIDW VKLLHGEQRMRLHRPLPASGEVVGHNRITHLTDKGEGKGAIMVTERRLETAAGELLATVQQVTFLRGDGGYSQQGGGQPS DAPLPALQPTPQDRAPDFTDTQPTRPEAALLYRLMGDYNPLHADPAVAAKAGFERPILHGLASYGLVAHAVLRQCCAGDP ARLKAMDIRFAAPVYPGETLVTEIWRVPGQPAQVQLRARVLERDKVVLSHGFAELA
Specific function: Unknown
COG id: COG2030
COG function: function code I; Acyl dehydratase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI4504505, Length=283, Percent_Identity=38.86925795053, Blast_Score=177, Evalue=1e-44, Organism=Caenorhabditis elegans, GI17532783, Length=283, Percent_Identity=36.3957597173145, Blast_Score=158, Evalue=4e-39, Organism=Saccharomyces cerevisiae, GI6322861, Length=299, Percent_Identity=30.4347826086957, Blast_Score=104, Evalue=2e-23, Organism=Drosophila melanogaster, GI18859837, Length=287, Percent_Identity=35.5400696864112, Blast_Score=164, Evalue=5e-41,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32350; Mature: 32219
Theoretical pI: Translated: 6.86; Mature: 6.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIDYHHLKARDFGVIRQTYTERDTMLYALSLGLGNDPLNASALPFVYEGLEGGLRALPS CCCCCCHHCHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCC QAVVLGYPGFWAREPDTGIDWVKLLHGEQRMRLHRPLPASGEVVGHNRITHLTDKGEGKG CEEEEECCCCCCCCCCCCHHHHHHHHCHHHHHHCCCCCCCCCEECCCCEEEECCCCCCCE AIMVTERRLETAAGELLATVQQVTFLRGDGGYSQQGGGQPSDAPLPALQPTPQDRAPDFT EEEEEHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DTQPTRPEAALLYRLMGDYNPLHADPAVAAKAGFERPILHGLASYGLVAHAVLRQCCAGD CCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCC PARLKAMDIRFAAPVYPGETLVTEIWRVPGQPAQVQLRARVLERDKVVLSHGFAELA HHHEEEEEEEEECCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHCC >Mature Secondary Structure AIDYHHLKARDFGVIRQTYTERDTMLYALSLGLGNDPLNASALPFVYEGLEGGLRALPS CCCCCHHCHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCC QAVVLGYPGFWAREPDTGIDWVKLLHGEQRMRLHRPLPASGEVVGHNRITHLTDKGEGKG CEEEEECCCCCCCCCCCCHHHHHHHHCHHHHHHCCCCCCCCCEECCCCEEEECCCCCCCE AIMVTERRLETAAGELLATVQQVTFLRGDGGYSQQGGGQPSDAPLPALQPTPQDRAPDFT EEEEEHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DTQPTRPEAALLYRLMGDYNPLHADPAVAAKAGFERPILHGLASYGLVAHAVLRQCCAGD CCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCC PARLKAMDIRFAAPVYPGETLVTEIWRVPGQPAQVQLRARVLERDKVVLSHGFAELA HHHEEEEEEEEECCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA