| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is acsA1 [H]
Identifier: 222109299
GI number: 222109299
Start: 82917
End: 85004
Strand: Direct
Name: acsA1 [H]
Synonym: Dtpsy_0074
Alternate gene names: 222109299
Gene position: 82917-85004 (Clockwise)
Preceding gene: 222109298
Following gene: 222109305
Centisome position: 2.18
GC content: 69.4
Gene sequence:
>2088_bases ATGGAGACACACCACAACATCCCCCCAACACACCCGCCTTACACGCCCCAGATACGCCGCTACCAGGATTGGCTGCAGGC GCAGCACGGCCTGCGCTTTGACGATTACCACGCGCTTTGGCGCTGGTCCACCACCGATCTGGACGCCTTCTGGCAGAGCG TCTGGGACTACTTCGACCTGCAGTCACCCACGCCGCACCGCGCGGTACTCGCAAAGAACGTGATGCCCGGCGCGCAGTGG TTCCCCGGCGCGCAGGTGAACTACGCGCGCCAGGTGCTGCGCCATGTGGACGCCGCACAGGCCGCGGGCCAGCCGGCCCT CATCGGCCGCAACGAACGCGGCGAGCGCCGCGAGCTGTCCTGGCCCGCGCTGCGCCGGCAGGTGGCGGCGCTGGCGCTGC ACATGAGGGCCCAAGGCGTACAGCCCGGCGATCGCGTGGCAGCCTACCTGCCCAACATCCCCGAGACCATCGTCGCCTTC CTGGCCTGCGCCAGCATCGGCGCGGTGTGGAGCCTGTGCGCGCCCGACATGGGCACGCACGCGGTGCTGGACCGCTTCCG CCAGATCGCACCGACGGTGCTGTTGGCCGTGGACGGCGTCACCTATGGGGGGCGCGACCATGACCGTTGCGACGTGCTGG CGGAACTGCGCGCGCAACTGCCCACGCTGCGCCACGTGGTGCTGGTGAGCAATCTGGACGCTTCAAAAACAGTAGCTGAT ACCGCTTGCTACGCAAGCGTTATCGCCCGAAATGATGCAGAAACTGCGGCCTTTGAACCGGCGTGGCTGCCGTTCGACCA CCCGCTGTGGATCGTCTATTCCAGCGGCACCACCGGCCTGCCCAAGCCCATCGTGCATGGCCATGGCGGCATGTTGCTGG TGATGCTGCAGCTGGCGGTGCTGCACAACGACATCGGCTGCAGCTACGCGCCCAACTCCCTGGGCGAGCGCTACCACTGG TACAGCTCCACCGGCTGGATCATGTGGAACGCCCAGGTCGGCGGCCTGCTGGGCGGCACCACCTGCGTGCTGTACGACGG CAACCCCGGCGGCAGCAAGGAGCGGCCCGACTGGACGGTGCTGTGGCGCATGGCAGCAGAGGAGCGCGTGACCTTCTTCG GCGCTGGCGCCGCGTTCTACGGCCACTGCATGAAGGCCGGGATCACCCCTGCGGCCTGCGGCGATCTGTCGGCGATCCGC GTGCTGGGCTCCACGGGGTCGCCGCTGCCTGCCGAAGTGCAGCGGTGGGGATCGCAACTCCTGGCCAGCGCGGGCGTGCC TCAGGTCTGGTGGTGCAACATCTCCGGCGGCACCGACTTCGCGGGCGCCTTCATCGGCGGCAATCGCGAGCTGCCGCAAA CGCCCGGGCGCATGCAGTGCCGCATGCTGGGCGCAGCCGTCGAGGCCTGGGACGAGCAGGGCCGCCCGGTGCTGGACGCC GTGGGCGAGCTGGTGTGCACCCAGCCCATCCCGTCCATGCCCTTGTTCCTGTGGGGCGACGCCGATGGCGCGCGCTACCG CGCCAGCTACTTCGAGATGTACCCGCCCGGCCATGGCCGCAGACCCGGCGGCGGGGATCTGGGGCCCGAGGCCGGGGCCG TCTGGCGCCACGGCGACTGGATCGAGATCGGCTCCAGCGCCCACCCCGGCTGCGTGATCTACGGCCGCAGCGACGCCACC ATCAACCGCCACGGGCTGCGCATGGGCACGAGCGAGATCTACAGCGCCGTGGAGGCTCTGCCCGAGGTGCTCGACAGCCT GGTCGTGGACCTGGAATACCTGGGCCGCGCCAGCTGGATGCCGCTGTTCGTCGTACTGCGCGCCGGCGCCGTGCTGGACG AGGCCCTGCGCGCGCGCATCCAGGGCGCGATCCGCAGCCATTTGAGCCCGCGCTTCGTGCCCGACGAGATCGTGCAGGTC GCCGAGGTGCCGCGCACGCTCAGCGGCAAGAAGCAGGAGCTGCCCATCAAGAAGCTGCTGCTGGGCCAGCCGATCGAGAA GGTGGTCAACAAGGACGCGATGGCCAACCCGGGCTGCCTGGCGTGGTACGTGGAATTCGCGGCGTGGCGGCAGGCTCATG CTTCGTGA
Upstream 100 bases:
>100_bases CGGCGAGGTGCGACCGGCCAGGTGCGACCGGCCAGGTGCGACCGGCCAGTTGTCACGTGCGTGGCGCGCACGGCGACCGC GACCGCGCTAGGCTGTGCGC
Downstream 100 bases:
>100_bases ATGGGGGCTGCTTGTGCACGTGTGGCGAGCGTTGGCACGCATCACCGCCGAGACGAACGGCGAAGTGAAGGTCCGCTTGC CCCTGAGCCGCTCGCTGCCG
Product: acetoacetyl-CoA synthetase
Products: NA
Alternate protein names: Acetoacetate--CoA ligase 1; Acyl-activating enzyme 1 [H]
Number of amino acids: Translated: 695; Mature: 695
Protein sequence:
>695_residues METHHNIPPTHPPYTPQIRRYQDWLQAQHGLRFDDYHALWRWSTTDLDAFWQSVWDYFDLQSPTPHRAVLAKNVMPGAQW FPGAQVNYARQVLRHVDAAQAAGQPALIGRNERGERRELSWPALRRQVAALALHMRAQGVQPGDRVAAYLPNIPETIVAF LACASIGAVWSLCAPDMGTHAVLDRFRQIAPTVLLAVDGVTYGGRDHDRCDVLAELRAQLPTLRHVVLVSNLDASKTVAD TACYASVIARNDAETAAFEPAWLPFDHPLWIVYSSGTTGLPKPIVHGHGGMLLVMLQLAVLHNDIGCSYAPNSLGERYHW YSSTGWIMWNAQVGGLLGGTTCVLYDGNPGGSKERPDWTVLWRMAAEERVTFFGAGAAFYGHCMKAGITPAACGDLSAIR VLGSTGSPLPAEVQRWGSQLLASAGVPQVWWCNISGGTDFAGAFIGGNRELPQTPGRMQCRMLGAAVEAWDEQGRPVLDA VGELVCTQPIPSMPLFLWGDADGARYRASYFEMYPPGHGRRPGGGDLGPEAGAVWRHGDWIEIGSSAHPGCVIYGRSDAT INRHGLRMGTSEIYSAVEALPEVLDSLVVDLEYLGRASWMPLFVVLRAGAVLDEALRARIQGAIRSHLSPRFVPDEIVQV AEVPRTLSGKKQELPIKKLLLGQPIEKVVNKDAMANPGCLAWYVEFAAWRQAHAS
Sequences:
>Translated_695_residues METHHNIPPTHPPYTPQIRRYQDWLQAQHGLRFDDYHALWRWSTTDLDAFWQSVWDYFDLQSPTPHRAVLAKNVMPGAQW FPGAQVNYARQVLRHVDAAQAAGQPALIGRNERGERRELSWPALRRQVAALALHMRAQGVQPGDRVAAYLPNIPETIVAF LACASIGAVWSLCAPDMGTHAVLDRFRQIAPTVLLAVDGVTYGGRDHDRCDVLAELRAQLPTLRHVVLVSNLDASKTVAD TACYASVIARNDAETAAFEPAWLPFDHPLWIVYSSGTTGLPKPIVHGHGGMLLVMLQLAVLHNDIGCSYAPNSLGERYHW YSSTGWIMWNAQVGGLLGGTTCVLYDGNPGGSKERPDWTVLWRMAAEERVTFFGAGAAFYGHCMKAGITPAACGDLSAIR VLGSTGSPLPAEVQRWGSQLLASAGVPQVWWCNISGGTDFAGAFIGGNRELPQTPGRMQCRMLGAAVEAWDEQGRPVLDA VGELVCTQPIPSMPLFLWGDADGARYRASYFEMYPPGHGRRPGGGDLGPEAGAVWRHGDWIEIGSSAHPGCVIYGRSDAT INRHGLRMGTSEIYSAVEALPEVLDSLVVDLEYLGRASWMPLFVVLRAGAVLDEALRARIQGAIRSHLSPRFVPDEIVQV AEVPRTLSGKKQELPIKKLLLGQPIEKVVNKDAMANPGCLAWYVEFAAWRQAHAS >Mature_695_residues METHHNIPPTHPPYTPQIRRYQDWLQAQHGLRFDDYHALWRWSTTDLDAFWQSVWDYFDLQSPTPHRAVLAKNVMPGAQW FPGAQVNYARQVLRHVDAAQAAGQPALIGRNERGERRELSWPALRRQVAALALHMRAQGVQPGDRVAAYLPNIPETIVAF LACASIGAVWSLCAPDMGTHAVLDRFRQIAPTVLLAVDGVTYGGRDHDRCDVLAELRAQLPTLRHVVLVSNLDASKTVAD TACYASVIARNDAETAAFEPAWLPFDHPLWIVYSSGTTGLPKPIVHGHGGMLLVMLQLAVLHNDIGCSYAPNSLGERYHW YSSTGWIMWNAQVGGLLGGTTCVLYDGNPGGSKERPDWTVLWRMAAEERVTFFGAGAAFYGHCMKAGITPAACGDLSAIR VLGSTGSPLPAEVQRWGSQLLASAGVPQVWWCNISGGTDFAGAFIGGNRELPQTPGRMQCRMLGAAVEAWDEQGRPVLDA VGELVCTQPIPSMPLFLWGDADGARYRASYFEMYPPGHGRRPGGGDLGPEAGAVWRHGDWIEIGSSAHPGCVIYGRSDAT INRHGLRMGTSEIYSAVEALPEVLDSLVVDLEYLGRASWMPLFVVLRAGAVLDEALRARIQGAIRSHLSPRFVPDEIVQV AEVPRTLSGKKQELPIKKLLLGQPIEKVVNKDAMANPGCLAWYVEFAAWRQAHAS
Specific function: Involved in poly-3-hydroxybutyrate degradation. Activates acetoacetate to acetoacetyl-CoA [H]
COG id: COG0365
COG function: function code I; Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ATP-dependent AMP-binding enzyme family [H]
Homologues:
Organism=Homo sapiens, GI31982927, Length=676, Percent_Identity=35.6508875739645, Blast_Score=407, Evalue=1e-113, Organism=Homo sapiens, GI8923896, Length=696, Percent_Identity=25.5747126436782, Blast_Score=174, Evalue=3e-43, Organism=Homo sapiens, GI28416953, Length=662, Percent_Identity=26.4350453172205, Blast_Score=171, Evalue=3e-42, Organism=Homo sapiens, GI253970489, Length=709, Percent_Identity=24.9647390691114, Blast_Score=169, Evalue=1e-41, Organism=Homo sapiens, GI13375727, Length=644, Percent_Identity=23.4472049689441, Blast_Score=125, Evalue=2e-28, Organism=Escherichia coli, GI1790505, Length=672, Percent_Identity=26.4880952380952, Blast_Score=163, Evalue=3e-41, Organism=Escherichia coli, GI1786529, Length=642, Percent_Identity=26.1682242990654, Blast_Score=137, Evalue=3e-33, Organism=Caenorhabditis elegans, GI17569507, Length=679, Percent_Identity=32.1060382916053, Blast_Score=364, Evalue=1e-101, Organism=Caenorhabditis elegans, GI71982997, Length=672, Percent_Identity=25.1488095238095, Blast_Score=141, Evalue=1e-33, Organism=Caenorhabditis elegans, GI71983001, Length=672, Percent_Identity=25.1488095238095, Blast_Score=141, Evalue=1e-33, Organism=Saccharomyces cerevisiae, GI6319264, Length=692, Percent_Identity=25.4335260115607, Blast_Score=167, Evalue=4e-42, Organism=Saccharomyces cerevisiae, GI6323182, Length=678, Percent_Identity=25.6637168141593, Blast_Score=152, Evalue=2e-37, Organism=Drosophila melanogaster, GI24667955, Length=657, Percent_Identity=25.5707762557078, Blast_Score=174, Evalue=1e-43, Organism=Drosophila melanogaster, GI62472339, Length=566, Percent_Identity=26.5017667844523, Blast_Score=159, Evalue=5e-39, Organism=Drosophila melanogaster, GI24667959, Length=533, Percent_Identity=26.078799249531, Blast_Score=138, Evalue=1e-32, Organism=Drosophila melanogaster, GI21355225, Length=635, Percent_Identity=22.3622047244094, Blast_Score=113, Evalue=5e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005914 - InterPro: IPR020845 - InterPro: IPR000873 [H]
Pfam domain/function: PF00501 AMP-binding [H]
EC number: =6.2.1.16 [H]
Molecular weight: Translated: 76078; Mature: 76078
Theoretical pI: Translated: 6.84; Mature: 6.84
Prosite motif: PS00455 AMP_BINDING
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METHHNIPPTHPPYTPQIRRYQDWLQAQHGLRFDDYHALWRWSTTDLDAFWQSVWDYFDL CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHEEEECCCCHHHHHHHHHHHHCC QSPTPHRAVLAKNVMPGAQWFPGAQVNYARQVLRHVDAAQAAGQPALIGRNERGERRELS CCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCC WPALRRQVAALALHMRAQGVQPGDRVAAYLPNIPETIVAFLACASIGAVWSLCAPDMGTH CHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHH AVLDRFRQIAPTVLLAVDGVTYGGRDHDRCDVLAELRAQLPTLRHVVLVSNLDASKTVAD HHHHHHHHHHHEEEEEECCCCCCCCCCHHHHHHHHHHHHCCHHEEEEEEECCCCHHHHHH TACYASVIARNDAETAAFEPAWLPFDHPLWIVYSSGTTGLPKPIVHGHGGMLLVMLQLAV HHHHHHHHHCCCCCHHCCCCCCCCCCCCEEEEECCCCCCCCCCCEECCCCHHHHHHHHHH LHNDIGCSYAPNSLGERYHWYSSTGWIMWNAQVGGLLGGTTCVLYDGNPGGSKERPDWTV HHHCCCCCCCCHHHCCCEEEECCCCEEEEECCCCCEECCCEEEEECCCCCCCCCCCCCEE LWRMAAEERVTFFGAGAAFYGHCMKAGITPAACGDLSAIRVLGSTGSPLPAEVQRWGSQL EEEHHHHCCEEEEECCHHHHHHHHHHCCCCHHCCCCHHHHEECCCCCCCCHHHHHHHHHH LASAGVPQVWWCNISGGTDFAGAFIGGNRELPQTPGRMQCRMLGAAVEAWDEQGRPVLDA HHHCCCCEEEEEEECCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHH VGELVCTQPIPSMPLFLWGDADGARYRASYFEMYPPGHGRRPGGGDLGPEAGAVWRHGDW HHHHHCCCCCCCCCEEEEECCCCCCEEHHHEEECCCCCCCCCCCCCCCCCCCCEEECCCE IEIGSSAHPGCVIYGRSDATINRHGLRMGTSEIYSAVEALPEVLDSLVVDLEYLGRASWM EEECCCCCCCEEEECCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH PLFVVLRAGAVLDEALRARIQGAIRSHLSPRFVPDEIVQVAEVPRTLSGKKQELPIKKLL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHCCCCCCCCHHHHH LGQPIEKVVNKDAMANPGCLAWYVEFAAWRQAHAS HCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure METHHNIPPTHPPYTPQIRRYQDWLQAQHGLRFDDYHALWRWSTTDLDAFWQSVWDYFDL CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHEEEECCCCHHHHHHHHHHHHCC QSPTPHRAVLAKNVMPGAQWFPGAQVNYARQVLRHVDAAQAAGQPALIGRNERGERRELS CCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCC WPALRRQVAALALHMRAQGVQPGDRVAAYLPNIPETIVAFLACASIGAVWSLCAPDMGTH CHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHH AVLDRFRQIAPTVLLAVDGVTYGGRDHDRCDVLAELRAQLPTLRHVVLVSNLDASKTVAD HHHHHHHHHHHEEEEEECCCCCCCCCCHHHHHHHHHHHHCCHHEEEEEEECCCCHHHHHH TACYASVIARNDAETAAFEPAWLPFDHPLWIVYSSGTTGLPKPIVHGHGGMLLVMLQLAV HHHHHHHHHCCCCCHHCCCCCCCCCCCCEEEEECCCCCCCCCCCEECCCCHHHHHHHHHH LHNDIGCSYAPNSLGERYHWYSSTGWIMWNAQVGGLLGGTTCVLYDGNPGGSKERPDWTV HHHCCCCCCCCHHHCCCEEEECCCCEEEEECCCCCEECCCEEEEECCCCCCCCCCCCCEE LWRMAAEERVTFFGAGAAFYGHCMKAGITPAACGDLSAIRVLGSTGSPLPAEVQRWGSQL EEEHHHHCCEEEEECCHHHHHHHHHHCCCCHHCCCCHHHHEECCCCCCCCHHHHHHHHHH LASAGVPQVWWCNISGGTDFAGAFIGGNRELPQTPGRMQCRMLGAAVEAWDEQGRPVLDA HHHCCCCEEEEEEECCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHH VGELVCTQPIPSMPLFLWGDADGARYRASYFEMYPPGHGRRPGGGDLGPEAGAVWRHGDW HHHHHCCCCCCCCCEEEEECCCCCCEEHHHEEECCCCCCCCCCCCCCCCCCCCEEECCCE IEIGSSAHPGCVIYGRSDATINRHGLRMGTSEIYSAVEALPEVLDSLVVDLEYLGRASWM EEECCCCCCCEEEECCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH PLFVVLRAGAVLDEALRARIQGAIRSHLSPRFVPDEIVQVAEVPRTLSGKKQELPIKKLL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHCCCCCCCCHHHHH LGQPIEKVVNKDAMANPGCLAWYVEFAAWRQAHAS HCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10735852; 11481430 [H]