| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is 222109305
Identifier: 222109305
GI number: 222109305
Start: 90968
End: 91948
Strand: Direct
Name: 222109305
Synonym: Dtpsy_0081
Alternate gene names: NA
Gene position: 90968-91948 (Clockwise)
Preceding gene: 222109299
Following gene: 222109306
Centisome position: 2.4
GC content: 63.61
Gene sequence:
>981_bases ATGTTCAGAACCTCCATCCATCGCTCGATCCTCGCGGCCGCCGCTGCCCTCCTGGCCGGCCTCGCGGCGACGCCGGCGCA CGCCGCTTGGCCCTCGGACGCGCCGATCAACATCACCGTTGGGTTCGCCGCCGGCGGCACCACCGATGTCATGGTGCGCA ACCTCGCGCCCTTCATCGCCAAGCATCTCGGCGACAACGCATCCTTCGTCATCCAGAACCGGCCGGGAGCGTCGGGCGAG ATCGCCATCAATTCGGTGATGCGCGCCAAGCCGGACGGCTATTCCCTGGTGGTGGTCAATCTGCCGGGTTATTTTTTTGT ACCGATGTATCGCAAGTCGTCGTACACAACCAAGGACCTGACCCTGGTCGCGCGCCTCGTCGGCGACCCCACGATCATGG TGACCCGCAAGGACAGCAAGTTGATTGATCTGCGGCAGGTCGTGAGCCAGCTGAAAACCGATCCGTCGTCCTATTCGGCC GGCCACAACGGCCTGGGCACTAACGGACACTTGGCGATGGCCCAACTGGAAAACGCCGCCAGCGTGAAGTTCAACTCCAT CCCGTTCAACGGCTCGGCGCAGCAGAAGGCTGCCCTCACCACCAGCACGCTCGACATCGCGTTTCTGGCCGCTTCGGAGG TGCCGGATCCCGAGAACGAAGCCACGCCCGTACGTCTGCTGGCCCAGTTCACCAAGGACAAGGTGCAGCGCATCGCCAGC ACGCCTACCACGTTCGAAGTGGGATTTCCGGTTGAGATGACGGCCGAGCGTGGCATCGCCGCGCCCAACGGCGTTCCGGC CGCGATTCGCGCCCGGCTCGAGAAAGCCATTGAAGCCGCCCTCAAGGATCCCGAGTACGTCAAGACGGCTCGCAACGATG CGCCTTTCCTGTCCTTCCTCGGTGGCGCCGAATGGGCCAAGGCAGTCGAACAGGCACAAAAAGCCTACGAGCCGATCGCG CGAACGCTGCCCAAGGAATAA
Upstream 100 bases:
>100_bases TATCCTAAAACGACTGTCTTCTATTGAATAAATATCGCTTTCACTACTTTGTGGAAGGATTCAAGATTCGGCGCCCTACT ACAACTTCGGAGACATCGTG
Downstream 100 bases:
>100_bases ACGGAACTCATGGGTCGCGCTACGCAGGTATCGGCTCATGTGCCGTTGCTTCGTGCGCGCGGACATCGGCCTGGCTATTG CCGCGCGCCGTGGGCATGGC
Product: hypothetical protein
Products: NA
Alternate protein names: ORF5 [H]
Number of amino acids: Translated: 326; Mature: 326
Protein sequence:
>326_residues MFRTSIHRSILAAAAALLAGLAATPAHAAWPSDAPINITVGFAAGGTTDVMVRNLAPFIAKHLGDNASFVIQNRPGASGE IAINSVMRAKPDGYSLVVVNLPGYFFVPMYRKSSYTTKDLTLVARLVGDPTIMVTRKDSKLIDLRQVVSQLKTDPSSYSA GHNGLGTNGHLAMAQLENAASVKFNSIPFNGSAQQKAALTTSTLDIAFLAASEVPDPENEATPVRLLAQFTKDKVQRIAS TPTTFEVGFPVEMTAERGIAAPNGVPAAIRARLEKAIEAALKDPEYVKTARNDAPFLSFLGGAEWAKAVEQAQKAYEPIA RTLPKE
Sequences:
>Translated_326_residues MFRTSIHRSILAAAAALLAGLAATPAHAAWPSDAPINITVGFAAGGTTDVMVRNLAPFIAKHLGDNASFVIQNRPGASGE IAINSVMRAKPDGYSLVVVNLPGYFFVPMYRKSSYTTKDLTLVARLVGDPTIMVTRKDSKLIDLRQVVSQLKTDPSSYSA GHNGLGTNGHLAMAQLENAASVKFNSIPFNGSAQQKAALTTSTLDIAFLAASEVPDPENEATPVRLLAQFTKDKVQRIAS TPTTFEVGFPVEMTAERGIAAPNGVPAAIRARLEKAIEAALKDPEYVKTARNDAPFLSFLGGAEWAKAVEQAQKAYEPIA RTLPKE >Mature_326_residues MFRTSIHRSILAAAAALLAGLAATPAHAAWPSDAPINITVGFAAGGTTDVMVRNLAPFIAKHLGDNASFVIQNRPGASGE IAINSVMRAKPDGYSLVVVNLPGYFFVPMYRKSSYTTKDLTLVARLVGDPTIMVTRKDSKLIDLRQVVSQLKTDPSSYSA GHNGLGTNGHLAMAQLENAASVKFNSIPFNGSAQQKAALTTSTLDIAFLAASEVPDPENEATPVRLLAQFTKDKVQRIAS TPTTFEVGFPVEMTAERGIAAPNGVPAAIRARLEKAIEAALKDPEYVKTARNDAPFLSFLGGAEWAKAVEQAQKAYEPIA RTLPKE
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 34689; Mature: 34689
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRTSIHRSILAAAAALLAGLAATPAHAAWPSDAPINITVGFAAGGTTDVMVRNLAPFIA CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHH KHLGDNASFVIQNRPGASGEIAINSVMRAKPDGYSLVVVNLPGYFFVPMYRKSSYTTKDL HHHCCCCEEEEECCCCCCCCEEEHHHHHCCCCCCEEEEEECCCEEEEEEEECCCCCHHHH TLVARLVGDPTIMVTRKDSKLIDLRQVVSQLKTDPSSYSAGHNGLGTNGHLAMAQLENAA HHHHHHHCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEHEECCCCC SVKFNSIPFNGSAQQKAALTTSTLDIAFLAASEVPDPENEATPVRLLAQFTKDKVQRIAS CEEEECCCCCCCCCHHHHHHHHHHEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHC TPTTFEVGFPVEMTAERGIAAPNGVPAAIRARLEKAIEAALKDPEYVKTARNDAPFLSFL CCCEEEECCCEEEHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHH GGAEWAKAVEQAQKAYEPIARTLPKE CCHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MFRTSIHRSILAAAAALLAGLAATPAHAAWPSDAPINITVGFAAGGTTDVMVRNLAPFIA CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHH KHLGDNASFVIQNRPGASGEIAINSVMRAKPDGYSLVVVNLPGYFFVPMYRKSSYTTKDL HHHCCCCEEEEECCCCCCCCEEEHHHHHCCCCCCEEEEEECCCEEEEEEEECCCCCHHHH TLVARLVGDPTIMVTRKDSKLIDLRQVVSQLKTDPSSYSAGHNGLGTNGHLAMAQLENAA HHHHHHHCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEHEECCCCC SVKFNSIPFNGSAQQKAALTTSTLDIAFLAASEVPDPENEATPVRLLAQFTKDKVQRIAS CEEEECCCCCCCCCHHHHHHHHHHEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHC TPTTFEVGFPVEMTAERGIAAPNGVPAAIRARLEKAIEAALKDPEYVKTARNDAPFLSFL CCCEEEECCCEEEHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHH GGAEWAKAVEQAQKAYEPIARTLPKE CCHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9583950; 12910271 [H]