Definition Acidovorax ebreus TPSY chromosome, complete genome.
Accession NC_011992
Length 3,796,573

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The map label for this gene is 222109305

Identifier: 222109305

GI number: 222109305

Start: 90968

End: 91948

Strand: Direct

Name: 222109305

Synonym: Dtpsy_0081

Alternate gene names: NA

Gene position: 90968-91948 (Clockwise)

Preceding gene: 222109299

Following gene: 222109306

Centisome position: 2.4

GC content: 63.61

Gene sequence:

>981_bases
ATGTTCAGAACCTCCATCCATCGCTCGATCCTCGCGGCCGCCGCTGCCCTCCTGGCCGGCCTCGCGGCGACGCCGGCGCA
CGCCGCTTGGCCCTCGGACGCGCCGATCAACATCACCGTTGGGTTCGCCGCCGGCGGCACCACCGATGTCATGGTGCGCA
ACCTCGCGCCCTTCATCGCCAAGCATCTCGGCGACAACGCATCCTTCGTCATCCAGAACCGGCCGGGAGCGTCGGGCGAG
ATCGCCATCAATTCGGTGATGCGCGCCAAGCCGGACGGCTATTCCCTGGTGGTGGTCAATCTGCCGGGTTATTTTTTTGT
ACCGATGTATCGCAAGTCGTCGTACACAACCAAGGACCTGACCCTGGTCGCGCGCCTCGTCGGCGACCCCACGATCATGG
TGACCCGCAAGGACAGCAAGTTGATTGATCTGCGGCAGGTCGTGAGCCAGCTGAAAACCGATCCGTCGTCCTATTCGGCC
GGCCACAACGGCCTGGGCACTAACGGACACTTGGCGATGGCCCAACTGGAAAACGCCGCCAGCGTGAAGTTCAACTCCAT
CCCGTTCAACGGCTCGGCGCAGCAGAAGGCTGCCCTCACCACCAGCACGCTCGACATCGCGTTTCTGGCCGCTTCGGAGG
TGCCGGATCCCGAGAACGAAGCCACGCCCGTACGTCTGCTGGCCCAGTTCACCAAGGACAAGGTGCAGCGCATCGCCAGC
ACGCCTACCACGTTCGAAGTGGGATTTCCGGTTGAGATGACGGCCGAGCGTGGCATCGCCGCGCCCAACGGCGTTCCGGC
CGCGATTCGCGCCCGGCTCGAGAAAGCCATTGAAGCCGCCCTCAAGGATCCCGAGTACGTCAAGACGGCTCGCAACGATG
CGCCTTTCCTGTCCTTCCTCGGTGGCGCCGAATGGGCCAAGGCAGTCGAACAGGCACAAAAAGCCTACGAGCCGATCGCG
CGAACGCTGCCCAAGGAATAA

Upstream 100 bases:

>100_bases
TATCCTAAAACGACTGTCTTCTATTGAATAAATATCGCTTTCACTACTTTGTGGAAGGATTCAAGATTCGGCGCCCTACT
ACAACTTCGGAGACATCGTG

Downstream 100 bases:

>100_bases
ACGGAACTCATGGGTCGCGCTACGCAGGTATCGGCTCATGTGCCGTTGCTTCGTGCGCGCGGACATCGGCCTGGCTATTG
CCGCGCGCCGTGGGCATGGC

Product: hypothetical protein

Products: NA

Alternate protein names: ORF5 [H]

Number of amino acids: Translated: 326; Mature: 326

Protein sequence:

>326_residues
MFRTSIHRSILAAAAALLAGLAATPAHAAWPSDAPINITVGFAAGGTTDVMVRNLAPFIAKHLGDNASFVIQNRPGASGE
IAINSVMRAKPDGYSLVVVNLPGYFFVPMYRKSSYTTKDLTLVARLVGDPTIMVTRKDSKLIDLRQVVSQLKTDPSSYSA
GHNGLGTNGHLAMAQLENAASVKFNSIPFNGSAQQKAALTTSTLDIAFLAASEVPDPENEATPVRLLAQFTKDKVQRIAS
TPTTFEVGFPVEMTAERGIAAPNGVPAAIRARLEKAIEAALKDPEYVKTARNDAPFLSFLGGAEWAKAVEQAQKAYEPIA
RTLPKE

Sequences:

>Translated_326_residues
MFRTSIHRSILAAAAALLAGLAATPAHAAWPSDAPINITVGFAAGGTTDVMVRNLAPFIAKHLGDNASFVIQNRPGASGE
IAINSVMRAKPDGYSLVVVNLPGYFFVPMYRKSSYTTKDLTLVARLVGDPTIMVTRKDSKLIDLRQVVSQLKTDPSSYSA
GHNGLGTNGHLAMAQLENAASVKFNSIPFNGSAQQKAALTTSTLDIAFLAASEVPDPENEATPVRLLAQFTKDKVQRIAS
TPTTFEVGFPVEMTAERGIAAPNGVPAAIRARLEKAIEAALKDPEYVKTARNDAPFLSFLGGAEWAKAVEQAQKAYEPIA
RTLPKE
>Mature_326_residues
MFRTSIHRSILAAAAALLAGLAATPAHAAWPSDAPINITVGFAAGGTTDVMVRNLAPFIAKHLGDNASFVIQNRPGASGE
IAINSVMRAKPDGYSLVVVNLPGYFFVPMYRKSSYTTKDLTLVARLVGDPTIMVTRKDSKLIDLRQVVSQLKTDPSSYSA
GHNGLGTNGHLAMAQLENAASVKFNSIPFNGSAQQKAALTTSTLDIAFLAASEVPDPENEATPVRLLAQFTKDKVQRIAS
TPTTFEVGFPVEMTAERGIAAPNGVPAAIRARLEKAIEAALKDPEYVKTARNDAPFLSFLGGAEWAKAVEQAQKAYEPIA
RTLPKE

Specific function: Unknown

COG id: COG3181

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0065 (bug) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005064 [H]

Pfam domain/function: PF03401 Bug [H]

EC number: NA

Molecular weight: Translated: 34689; Mature: 34689

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRTSIHRSILAAAAALLAGLAATPAHAAWPSDAPINITVGFAAGGTTDVMVRNLAPFIA
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHH
KHLGDNASFVIQNRPGASGEIAINSVMRAKPDGYSLVVVNLPGYFFVPMYRKSSYTTKDL
HHHCCCCEEEEECCCCCCCCEEEHHHHHCCCCCCEEEEEECCCEEEEEEEECCCCCHHHH
TLVARLVGDPTIMVTRKDSKLIDLRQVVSQLKTDPSSYSAGHNGLGTNGHLAMAQLENAA
HHHHHHHCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEHEECCCCC
SVKFNSIPFNGSAQQKAALTTSTLDIAFLAASEVPDPENEATPVRLLAQFTKDKVQRIAS
CEEEECCCCCCCCCHHHHHHHHHHEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHC
TPTTFEVGFPVEMTAERGIAAPNGVPAAIRARLEKAIEAALKDPEYVKTARNDAPFLSFL
CCCEEEECCCEEEHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHH
GGAEWAKAVEQAQKAYEPIARTLPKE
CCHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MFRTSIHRSILAAAAALLAGLAATPAHAAWPSDAPINITVGFAAGGTTDVMVRNLAPFIA
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHH
KHLGDNASFVIQNRPGASGEIAINSVMRAKPDGYSLVVVNLPGYFFVPMYRKSSYTTKDL
HHHCCCCEEEEECCCCCCCCEEEHHHHHCCCCCCEEEEEECCCEEEEEEEECCCCCHHHH
TLVARLVGDPTIMVTRKDSKLIDLRQVVSQLKTDPSSYSAGHNGLGTNGHLAMAQLENAA
HHHHHHHCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEHEECCCCC
SVKFNSIPFNGSAQQKAALTTSTLDIAFLAASEVPDPENEATPVRLLAQFTKDKVQRIAS
CEEEECCCCCCCCCHHHHHHHHHHEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHC
TPTTFEVGFPVEMTAERGIAAPNGVPAAIRARLEKAIEAALKDPEYVKTARNDAPFLSFL
CCCEEEECCCEEEHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHH
GGAEWAKAVEQAQKAYEPIARTLPKE
CCHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9583950; 12910271 [H]