Definition Acidovorax ebreus TPSY chromosome, complete genome.
Accession NC_011992
Length 3,796,573

Click here to switch to the map view.

The map label for this gene is 222109292

Identifier: 222109292

GI number: 222109292

Start: 74263

End: 74994

Strand: Direct

Name: 222109292

Synonym: Dtpsy_0067

Alternate gene names: NA

Gene position: 74263-74994 (Clockwise)

Preceding gene: 222109290

Following gene: 222109298

Centisome position: 1.96

GC content: 71.72

Gene sequence:

>732_bases
ATGCCGTTCACACCGCTTTGCCCCTCGTGCCGCCAGCCCACCGAGATCCGGCGCTTTGCCGCCAGCACCGGAGGCACGCT
GGAGCTGGACCTGTGCTTTGCCTGCCAGGGCATGTGGTTCGACCCGCAGGAGAACACGCGCCTGGCGCCGGCGGCCGTGC
TGGAGCTGTTCGAGCTGCTGCACCAGCACCGTGGCGATGCACACCACCCGCTGGCCGACCGGCTGCGCTGCCCGCGCTGC
AGCCAGGCGCTGGCCAAGGGCTACGACGTGGCGCAGGGCGGGCGCTACGTCACCTACCGCTGCGCGGCGCGCCACGGGCG
CTTTTCGACCTTTGGTTCGTTCATGGTCGAGAAGGGCTTCGTGCGGCACCTGTCCACGATGGAGATCGAGGCGCTGGCCG
AGCGTGTGGGCACCATCAACTGCACAAGCTGCGGCGGCACGGTGGACATCCGCCACGACCACGCCTGCCCCTACTGCCGC
TCGGCCCTGTCGCTGCTGGACCCGCAGGCGGTGGACAAGGCCCTGGCGCGCCACGGCAGCGCCGCCCGTCAGACCGCGCC
GGCGGACGCCGCCTCGCCCGACGCCCTGGCCGACGCGCTGGTGGCGCTGGAGCGCAACCGTGCGCGGGAGGAGCGTGCAC
GCCAGCGCGAACGGCTGGAGGGCACGCGCAGCGATGAGTTCGACCTGCTCACCGCGGGCATCGAGATGGTGTGGTCACTG
CTGCGGCGTTGA

Upstream 100 bases:

>100_bases
TAGGGATAACCCTGGCCTTACACCGCGCTGACGCAGGCCGCCCGCGCAGGTACGGCCGCGTCGCGGCACCGGCCGGGCAG
GCAGTACGATCGCGTCCACC

Downstream 100 bases:

>100_bases
TCTGTCTGCTACTAAAAAAAGAGCTGCTGGCGCTTATTACGATTGATTTTCAAGGCAGAAAGTGCCTTGAATCGTTTCAG
GATAAGCGCTAGCAGCTATG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 243; Mature: 242

Protein sequence:

>243_residues
MPFTPLCPSCRQPTEIRRFAASTGGTLELDLCFACQGMWFDPQENTRLAPAAVLELFELLHQHRGDAHHPLADRLRCPRC
SQALAKGYDVAQGGRYVTYRCAARHGRFSTFGSFMVEKGFVRHLSTMEIEALAERVGTINCTSCGGTVDIRHDHACPYCR
SALSLLDPQAVDKALARHGSAARQTAPADAASPDALADALVALERNRAREERARQRERLEGTRSDEFDLLTAGIEMVWSL
LRR

Sequences:

>Translated_243_residues
MPFTPLCPSCRQPTEIRRFAASTGGTLELDLCFACQGMWFDPQENTRLAPAAVLELFELLHQHRGDAHHPLADRLRCPRC
SQALAKGYDVAQGGRYVTYRCAARHGRFSTFGSFMVEKGFVRHLSTMEIEALAERVGTINCTSCGGTVDIRHDHACPYCR
SALSLLDPQAVDKALARHGSAARQTAPADAASPDALADALVALERNRAREERARQRERLEGTRSDEFDLLTAGIEMVWSL
LRR
>Mature_242_residues
PFTPLCPSCRQPTEIRRFAASTGGTLELDLCFACQGMWFDPQENTRLAPAAVLELFELLHQHRGDAHHPLADRLRCPRCS
QALAKGYDVAQGGRYVTYRCAARHGRFSTFGSFMVEKGFVRHLSTMEIEALAERVGTINCTSCGGTVDIRHDHACPYCRS
ALSLLDPQAVDKALARHGSAARQTAPADAASPDALADALVALERNRAREERARQRERLEGTRSDEFDLLTAGIEMVWSLL
RR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26941; Mature: 26810

Theoretical pI: Translated: 7.68; Mature: 7.68

Prosite motif: PS00290 IG_MHC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
4.5 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFTPLCPSCRQPTEIRRFAASTGGTLELDLCFACQGMWFDPQENTRLAPAAVLELFELL
CCCCCCCCCCCCHHHHHHHHHCCCCEEEEEHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH
HQHRGDAHHPLADRLRCPRCSQALAKGYDVAQGGRYVTYRCAARHGRFSTFGSFMVEKGF
HHHCCCCCCCHHHHHCCCHHHHHHHCCCCCCCCCCEEEEEEHHHCCCHHHHHHHHHHHHH
VRHLSTMEIEALAERVGTINCTSCGGTVDIRHDHACPYCRSALSLLDPQAVDKALARHGS
HHHHHHHHHHHHHHHHCCCEECCCCCEEEECCCCCCHHHHHHHHHHCHHHHHHHHHHCCC
AARQTAPADAASPDALADALVALERNRAREERARQRERLEGTRSDEFDLLTAGIEMVWSL
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
LRR
HCC
>Mature Secondary Structure 
PFTPLCPSCRQPTEIRRFAASTGGTLELDLCFACQGMWFDPQENTRLAPAAVLELFELL
CCCCCCCCCCCHHHHHHHHHCCCCEEEEEHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH
HQHRGDAHHPLADRLRCPRCSQALAKGYDVAQGGRYVTYRCAARHGRFSTFGSFMVEKGF
HHHCCCCCCCHHHHHCCCHHHHHHHCCCCCCCCCCEEEEEEHHHCCCHHHHHHHHHHHHH
VRHLSTMEIEALAERVGTINCTSCGGTVDIRHDHACPYCRSALSLLDPQAVDKALARHGS
HHHHHHHHHHHHHHHHCCCEECCCCCEEEECCCCCCHHHHHHHHHHCHHHHHHHHHHCCC
AARQTAPADAASPDALADALVALERNRAREERARQRERLEGTRSDEFDLLTAGIEMVWSL
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
LRR
HCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA