| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is livJ [C]
Identifier: 222109290
GI number: 222109290
Start: 71139
End: 72296
Strand: Direct
Name: livJ [C]
Synonym: Dtpsy_0065
Alternate gene names: 222109290
Gene position: 71139-72296 (Clockwise)
Preceding gene: 222109288
Following gene: 222109292
Centisome position: 1.87
GC content: 71.59
Gene sequence:
>1158_bases ATGCAACGCCGCCAGTTTGTCCTCCAAGCCGGCCGGGCCGCCGCCCTCGCGGCCGCGCCGGCCTTCGTGCTCCCGGCCCG TGCGCAGGACGCGCCAGGCGTGTCCGCCAAGGCCCTCTCGATCGGCTGCTCGGCCGCCATGAGCGGCCCGCTGCTGGGCT TTGGCACCGACATCCAGCTGGGCGCGGGCGCTGCTTTCGCGCAGGCCAACGCGCGCGGCGGTGTGCATGGGCGCACGCTG CAGCTGCAGATGGTGGACGACGCCTATGACCCCGAGCGCACGCTGGCCAACGTCAAGCAGATCATCGGCCAGGGCAGCGC ACTGGCGCTGCTGTCGTGCGTGGGCACGCCCAACAACACGGCCATCGTGCCGCTGGTGGAAGAGGCCGGTATTCCCTACG TGGCGCCGATCACGGGCGCGTCGTCGCTGCGCAAGAGCACGCGCAACGTGTTCCATGTGCGCGCCAGCTACACCGACGAG GTGCAGCGCCTCATCCAGCGCCTGGCGGGCATGGGCCTGAAGGGCATCGGCGTGGTGTACCTGGACAACGGCTACGGCCG CGAAATGCTGGAGGACGCCACGCGCGCCCTGGCGGCGCTGAACATGAAGCCCGCCGTGCAGGTGGCCGTGGCCACCGACG GCAAGAACCTTCCCCAGGTGCTGCAGGCCGTGGCCGCGGCGCGCCCCTCGGCCGTGCTGCTGGCGACCGCGGGCACGGTG TCCGTGGGCCTGGTGCGCGGCATCAAGAAGGAATCGCCCGGCGTGCTCATGGCCGGCCTGAGCGTGACGCTGCCCAGCGC CAGCGTGGGCCAGCTGGGCGAGGACGGCAGCGGCCTCGCGCTGTCCATGATCGTGCCCGACCCCAACCGCGCCAAGCTGC AGCTGGTGCGCGACTACCAGTCCGCCATGCGCGCGCAGGTCAAGAGCGAGTTCTCGCAAGGCAGCCTGGAGGCCTACGTG AACGCGCGCGTGCTCATCGAAGGCCTGGACCGTGCCGGCAAGGACGTGACCCAGCCCAAGCTGCGCGCGGCGCTGGCGGG CATCCGCAACCTGGACCTGGGCGGCTTCGTGGTGGACTACAGCGGCCAGGCGCCCTACGTGGGCTCGCGCTTCATCGACC TGGGCGTGCTGGGCAGCACGGGCCGCTTCATCGCCTGA
Upstream 100 bases:
>100_bases GAGCTTATCCGTTTCCCGTGCGCAGTGCTTTGCGTGGCCCATCAGCGGGCCGGGGCGCCGCGGGGCAGCCTTCCCATCCA ACCCACACATTCCTTTGACC
Downstream 100 bases:
>100_bases AAGCGGCACCGCTGAGGCGCTTTGCGCCTCGGTGCAGCTGCCCAAGGCGGCAGCCCTTCGGGAACGTCCAAGCCTGCGCA GGCAGCTAGTGCGCGCCGCA
Product: extracellular ligand-binding receptor
Products: ADP; phosphate; L-leucine [Cytoplasm]; ADP; L-valine [Cytoplasm]; L-iso-leucine [Cytoplasm] [C]
Alternate protein names: Abc-Type Branched-Chain Amino Acid Transport Systems; Serine/Threonine Protein Kinase; Branched-Chain Amino Acid ABC Transporter; Lipoprotein; ABC Branched-Chain Amino Acid Transporters; Signal Peptide; ABC Branched-Chain Amino Acid Transporter
Number of amino acids: Translated: 385; Mature: 385
Protein sequence:
>385_residues MQRRQFVLQAGRAAALAAAPAFVLPARAQDAPGVSAKALSIGCSAAMSGPLLGFGTDIQLGAGAAFAQANARGGVHGRTL QLQMVDDAYDPERTLANVKQIIGQGSALALLSCVGTPNNTAIVPLVEEAGIPYVAPITGASSLRKSTRNVFHVRASYTDE VQRLIQRLAGMGLKGIGVVYLDNGYGREMLEDATRALAALNMKPAVQVAVATDGKNLPQVLQAVAAARPSAVLLATAGTV SVGLVRGIKKESPGVLMAGLSVTLPSASVGQLGEDGSGLALSMIVPDPNRAKLQLVRDYQSAMRAQVKSEFSQGSLEAYV NARVLIEGLDRAGKDVTQPKLRAALAGIRNLDLGGFVVDYSGQAPYVGSRFIDLGVLGSTGRFIA
Sequences:
>Translated_385_residues MQRRQFVLQAGRAAALAAAPAFVLPARAQDAPGVSAKALSIGCSAAMSGPLLGFGTDIQLGAGAAFAQANARGGVHGRTL QLQMVDDAYDPERTLANVKQIIGQGSALALLSCVGTPNNTAIVPLVEEAGIPYVAPITGASSLRKSTRNVFHVRASYTDE VQRLIQRLAGMGLKGIGVVYLDNGYGREMLEDATRALAALNMKPAVQVAVATDGKNLPQVLQAVAAARPSAVLLATAGTV SVGLVRGIKKESPGVLMAGLSVTLPSASVGQLGEDGSGLALSMIVPDPNRAKLQLVRDYQSAMRAQVKSEFSQGSLEAYV NARVLIEGLDRAGKDVTQPKLRAALAGIRNLDLGGFVVDYSGQAPYVGSRFIDLGVLGSTGRFIA >Mature_385_residues MQRRQFVLQAGRAAALAAAPAFVLPARAQDAPGVSAKALSIGCSAAMSGPLLGFGTDIQLGAGAAFAQANARGGVHGRTL QLQMVDDAYDPERTLANVKQIIGQGSALALLSCVGTPNNTAIVPLVEEAGIPYVAPITGASSLRKSTRNVFHVRASYTDE VQRLIQRLAGMGLKGIGVVYLDNGYGREMLEDATRALAALNMKPAVQVAVATDGKNLPQVLQAVAAARPSAVLLATAGTV SVGLVRGIKKESPGVLMAGLSVTLPSASVGQLGEDGSGLALSMIVPDPNRAKLQLVRDYQSAMRAQVKSEFSQGSLEAYV NARVLIEGLDRAGKDVTQPKLRAALAGIRNLDLGGFVVDYSGQAPYVGSRFIDLGVLGSTGRFIA
Specific function: This Protein Is A Component Of The Leucine, Isoleucine, Valine, (Threonine) Transport System, Which Is One Of The Two Periplasmic Binding Protein-Dependent Transport Systems Of The High-Affinity Transport Of The Branched-Chain Amino Acids. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 10140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 8822 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 8,000 Molecules/Cell In: Glucose minimal med
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39799; Mature: 39799
Theoretical pI: Translated: 10.04; Mature: 10.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRRQFVLQAGRAAALAAAPAFVLPARAQDAPGVSAKALSIGCSAAMSGPLLGFGTDIQL CCCHHHHHHCCCHHHHHHCCCEEECCCCCCCCCCCCCEEEECHHHHCCCCEEECCCCEEE GAGAAFAQANARGGVHGRTLQLQMVDDAYDPERTLANVKQIIGQGSALALLSCVGTPNNT CCCCHHHCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCC AIVPLVEEAGIPYVAPITGASSLRKSTRNVFHVRASYTDEVQRLIQRLAGMGLKGIGVVY EEEEEHHHCCCCEEEECCCHHHHHHHHCCEEEEEECCHHHHHHHHHHHHCCCCCCEEEEE LDNGYGREMLEDATRALAALNMKPAVQVAVATDGKNLPQVLQAVAAARPSAVLLATAGTV EECCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCEEEEEECCHH SVGLVRGIKKESPGVLMAGLSVTLPSASVGQLGEDGSGLALSMIVPDPNRAKLQLVRDYQ HHHHHHCCCCCCCCEEEECCEEECCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHH SAMRAQVKSEFSQGSLEAYVNARVLIEGLDRAGKDVTQPKLRAALAGIRNLDLGGFVVDY HHHHHHHHHHHCCCCEEHHHHHHHEEEHHHHCCCCCCCHHHHHHHHHHCCCCCCCEEEEE SGQAPYVGSRFIDLGVLGSTGRFIA CCCCCCCCCEEEEEEEECCCCCCCC >Mature Secondary Structure MQRRQFVLQAGRAAALAAAPAFVLPARAQDAPGVSAKALSIGCSAAMSGPLLGFGTDIQL CCCHHHHHHCCCHHHHHHCCCEEECCCCCCCCCCCCCEEEECHHHHCCCCEEECCCCEEE GAGAAFAQANARGGVHGRTLQLQMVDDAYDPERTLANVKQIIGQGSALALLSCVGTPNNT CCCCHHHCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCC AIVPLVEEAGIPYVAPITGASSLRKSTRNVFHVRASYTDEVQRLIQRLAGMGLKGIGVVY EEEEEHHHCCCCEEEECCCHHHHHHHHCCEEEEEECCHHHHHHHHHHHHCCCCCCEEEEE LDNGYGREMLEDATRALAALNMKPAVQVAVATDGKNLPQVLQAVAAARPSAVLLATAGTV EECCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCEEEEEECCHH SVGLVRGIKKESPGVLMAGLSVTLPSASVGQLGEDGSGLALSMIVPDPNRAKLQLVRDYQ HHHHHHCCCCCCCCEEEECCEEECCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHH SAMRAQVKSEFSQGSLEAYVNARVLIEGLDRAGKDVTQPKLRAALAGIRNLDLGGFVVDY HHHHHHHHHHHCCCCEEHHHHHHHEEEHHHHCCCCCCCHHHHHHHHHHCCCCCCCEEEEE SGQAPYVGSRFIDLGVLGSTGRFIA CCCCCCCCCEEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O; ATP; L-valine [Periplasm]; L-iso-leucine [Periplasm] [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA