| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is 222109292
Identifier: 222109292
GI number: 222109292
Start: 74263
End: 74994
Strand: Direct
Name: 222109292
Synonym: Dtpsy_0067
Alternate gene names: NA
Gene position: 74263-74994 (Clockwise)
Preceding gene: 222109290
Following gene: 222109298
Centisome position: 1.96
GC content: 71.72
Gene sequence:
>732_bases ATGCCGTTCACACCGCTTTGCCCCTCGTGCCGCCAGCCCACCGAGATCCGGCGCTTTGCCGCCAGCACCGGAGGCACGCT GGAGCTGGACCTGTGCTTTGCCTGCCAGGGCATGTGGTTCGACCCGCAGGAGAACACGCGCCTGGCGCCGGCGGCCGTGC TGGAGCTGTTCGAGCTGCTGCACCAGCACCGTGGCGATGCACACCACCCGCTGGCCGACCGGCTGCGCTGCCCGCGCTGC AGCCAGGCGCTGGCCAAGGGCTACGACGTGGCGCAGGGCGGGCGCTACGTCACCTACCGCTGCGCGGCGCGCCACGGGCG CTTTTCGACCTTTGGTTCGTTCATGGTCGAGAAGGGCTTCGTGCGGCACCTGTCCACGATGGAGATCGAGGCGCTGGCCG AGCGTGTGGGCACCATCAACTGCACAAGCTGCGGCGGCACGGTGGACATCCGCCACGACCACGCCTGCCCCTACTGCCGC TCGGCCCTGTCGCTGCTGGACCCGCAGGCGGTGGACAAGGCCCTGGCGCGCCACGGCAGCGCCGCCCGTCAGACCGCGCC GGCGGACGCCGCCTCGCCCGACGCCCTGGCCGACGCGCTGGTGGCGCTGGAGCGCAACCGTGCGCGGGAGGAGCGTGCAC GCCAGCGCGAACGGCTGGAGGGCACGCGCAGCGATGAGTTCGACCTGCTCACCGCGGGCATCGAGATGGTGTGGTCACTG CTGCGGCGTTGA
Upstream 100 bases:
>100_bases TAGGGATAACCCTGGCCTTACACCGCGCTGACGCAGGCCGCCCGCGCAGGTACGGCCGCGTCGCGGCACCGGCCGGGCAG GCAGTACGATCGCGTCCACC
Downstream 100 bases:
>100_bases TCTGTCTGCTACTAAAAAAAGAGCTGCTGGCGCTTATTACGATTGATTTTCAAGGCAGAAAGTGCCTTGAATCGTTTCAG GATAAGCGCTAGCAGCTATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 243; Mature: 242
Protein sequence:
>243_residues MPFTPLCPSCRQPTEIRRFAASTGGTLELDLCFACQGMWFDPQENTRLAPAAVLELFELLHQHRGDAHHPLADRLRCPRC SQALAKGYDVAQGGRYVTYRCAARHGRFSTFGSFMVEKGFVRHLSTMEIEALAERVGTINCTSCGGTVDIRHDHACPYCR SALSLLDPQAVDKALARHGSAARQTAPADAASPDALADALVALERNRAREERARQRERLEGTRSDEFDLLTAGIEMVWSL LRR
Sequences:
>Translated_243_residues MPFTPLCPSCRQPTEIRRFAASTGGTLELDLCFACQGMWFDPQENTRLAPAAVLELFELLHQHRGDAHHPLADRLRCPRC SQALAKGYDVAQGGRYVTYRCAARHGRFSTFGSFMVEKGFVRHLSTMEIEALAERVGTINCTSCGGTVDIRHDHACPYCR SALSLLDPQAVDKALARHGSAARQTAPADAASPDALADALVALERNRAREERARQRERLEGTRSDEFDLLTAGIEMVWSL LRR >Mature_242_residues PFTPLCPSCRQPTEIRRFAASTGGTLELDLCFACQGMWFDPQENTRLAPAAVLELFELLHQHRGDAHHPLADRLRCPRCS QALAKGYDVAQGGRYVTYRCAARHGRFSTFGSFMVEKGFVRHLSTMEIEALAERVGTINCTSCGGTVDIRHDHACPYCRS ALSLLDPQAVDKALARHGSAARQTAPADAASPDALADALVALERNRAREERARQRERLEGTRSDEFDLLTAGIEMVWSLL RR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26941; Mature: 26810
Theoretical pI: Translated: 7.68; Mature: 7.68
Prosite motif: PS00290 IG_MHC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 4.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFTPLCPSCRQPTEIRRFAASTGGTLELDLCFACQGMWFDPQENTRLAPAAVLELFELL CCCCCCCCCCCCHHHHHHHHHCCCCEEEEEHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH HQHRGDAHHPLADRLRCPRCSQALAKGYDVAQGGRYVTYRCAARHGRFSTFGSFMVEKGF HHHCCCCCCCHHHHHCCCHHHHHHHCCCCCCCCCCEEEEEEHHHCCCHHHHHHHHHHHHH VRHLSTMEIEALAERVGTINCTSCGGTVDIRHDHACPYCRSALSLLDPQAVDKALARHGS HHHHHHHHHHHHHHHHCCCEECCCCCEEEECCCCCCHHHHHHHHHHCHHHHHHHHHHCCC AARQTAPADAASPDALADALVALERNRAREERARQRERLEGTRSDEFDLLTAGIEMVWSL HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH LRR HCC >Mature Secondary Structure PFTPLCPSCRQPTEIRRFAASTGGTLELDLCFACQGMWFDPQENTRLAPAAVLELFELL CCCCCCCCCCCHHHHHHHHHCCCCEEEEEHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH HQHRGDAHHPLADRLRCPRCSQALAKGYDVAQGGRYVTYRCAARHGRFSTFGSFMVEKGF HHHCCCCCCCHHHHHCCCHHHHHHHCCCCCCCCCCEEEEEEHHHCCCHHHHHHHHHHHHH VRHLSTMEIEALAERVGTINCTSCGGTVDIRHDHACPYCRSALSLLDPQAVDKALARHGS HHHHHHHHHHHHHHHHCCCEECCCCCEEEECCCCCCHHHHHHHHHHCHHHHHHHHHHCCC AARQTAPADAASPDALADALVALERNRAREERARQRERLEGTRSDEFDLLTAGIEMVWSL HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH LRR HCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA