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The map label for this gene is parB [H]

Identifier: 222109275

GI number: 222109275

Start: 53147

End: 54142

Strand: Direct

Name: parB [H]

Synonym: Dtpsy_0050

Alternate gene names: 222109275

Gene position: 53147-54142 (Clockwise)

Preceding gene: 222109274

Following gene: 222109276

Centisome position: 1.4

GC content: 69.48

Gene sequence:

>996_bases
ATGGTCACCAAGAAACCCAAGGGCCTGGGACGCGGCCTGGAAGCACTGCTGGGCCCCAAGGTGGCCGACAAGGCGCCCGC
CGGCGCCAACGCAGCGGGTGCGGCAGACGGGCCGGTGAGCACGCTGGCCCTGGACCGTCTCGTGCCCGGCATCTACCAGC
CGCGCACGCGCATGGACGAGGGCGCGCTGTACGAACTGGCCGAATCCATCAAGGCCCAGGGCATCATGCAGCCGATCCTT
GTGCGTCGCCTTGACGACGAACAGGCGCAACAGCGCCGCCAGGAGCGTGCATCGCAGGGGGCTTCGGCAGCGATGGGTGC
CCTCAGCGCCAGTGGGCCGTTGTACGAAATCATCGCGGGCGAGCGCCGCTTTCGCGCCTCACGCCTGGCGGGCCTGGCCG
AGGTGCCGGTGCTGGTGCGCGACGTGCCCAACGAGGCGGCCGCGGCCATGGCGCTCATCGAGAACATCCAGCGCGAAGAC
CTCAACCCGCTGGAAGAGGCCCAGGGCCTGCAGCGCCTGATCCGCGAGTTCGGCCTCACCCACGAACTGGCGGCGCAGGC
CGTGGGGCGCTCGCGCAGCGCGGCGAGCAACCTGCTGCGCCTTTTGAACCTGGCCGAGCCGGTGCAGACCATGCTCATGG
CCGGCGACATCGACATGGGCCACGCGCGCGCGTTGCTGTCGCTGGAGCGCGCGGCGCAGATCACCGCGGGCAACCAGATC
GCGGCGAAGAAGCTGTCGGTGCGCGAGGCCGAGAGCCTCGTCAAGAAGCTGGGTGCGGAGTTCGCCCTCACGCCGCAAAA
GCCCAAGAAGGACAAGTCGCGCGACCTCAAGCGCGTGGAGGAAGAGTTGTCCGACCTGCTCATGGCCGAGGTCGAGGTGC
GCGTCAAGAAGCGCGTCAAGCGCGGCAGCCGGGTTGAGGAGATGGGCGAGCTGGCCATCCAGTTTGGCTCGCTGGAGGCG
CTCAACGGCCTCATCGAGCGCCTGCGGGGCGGCTGA

Upstream 100 bases:

>100_bases
CTGCGGGCCCCGCGGCCATATCAACGCCGATTCCGACCTGGGCGAATGGCCCGAAGGGCACGCACTGCTGCGCGCATTGA
TGAACAAGGACTGAAGACAC

Downstream 100 bases:

>100_bases
CGCCGCATCGTTGCGGCCCGTGCCCATGCCGCGCCGGCCCCGCCGACTCCATCATCTGCACGCGCCGCCGCCGCGGCGCA
TCGTCCTGCCCTGGCCGCTG

Product: parb-like partition protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 331; Mature: 331

Protein sequence:

>331_residues
MVTKKPKGLGRGLEALLGPKVADKAPAGANAAGAADGPVSTLALDRLVPGIYQPRTRMDEGALYELAESIKAQGIMQPIL
VRRLDDEQAQQRRQERASQGASAAMGALSASGPLYEIIAGERRFRASRLAGLAEVPVLVRDVPNEAAAAMALIENIQRED
LNPLEEAQGLQRLIREFGLTHELAAQAVGRSRSAASNLLRLLNLAEPVQTMLMAGDIDMGHARALLSLERAAQITAGNQI
AAKKLSVREAESLVKKLGAEFALTPQKPKKDKSRDLKRVEEELSDLLMAEVEVRVKKRVKRGSRVEEMGELAIQFGSLEA
LNGLIERLRGG

Sequences:

>Translated_331_residues
MVTKKPKGLGRGLEALLGPKVADKAPAGANAAGAADGPVSTLALDRLVPGIYQPRTRMDEGALYELAESIKAQGIMQPIL
VRRLDDEQAQQRRQERASQGASAAMGALSASGPLYEIIAGERRFRASRLAGLAEVPVLVRDVPNEAAAAMALIENIQRED
LNPLEEAQGLQRLIREFGLTHELAAQAVGRSRSAASNLLRLLNLAEPVQTMLMAGDIDMGHARALLSLERAAQITAGNQI
AAKKLSVREAESLVKKLGAEFALTPQKPKKDKSRDLKRVEEELSDLLMAEVEVRVKKRVKRGSRVEEMGELAIQFGSLEA
LNGLIERLRGG
>Mature_331_residues
MVTKKPKGLGRGLEALLGPKVADKAPAGANAAGAADGPVSTLALDRLVPGIYQPRTRMDEGALYELAESIKAQGIMQPIL
VRRLDDEQAQQRRQERASQGASAAMGALSASGPLYEIIAGERRFRASRLAGLAEVPVLVRDVPNEAAAAMALIENIQRED
LNPLEEAQGLQRLIREFGLTHELAAQAVGRSRSAASNLLRLLNLAEPVQTMLMAGDIDMGHARALLSLERAAQITAGNQI
AAKKLSVREAESLVKKLGAEFALTPQKPKKDKSRDLKRVEEELSDLLMAEVEVRVKKRVKRGSRVEEMGELAIQFGSLEA
LNGLIERLRGG

Specific function: Involved in chromosome partition. Localize to both poles of the predivisional cell following completion of DNA replication. Binds to the DNA origin of replication [H]

COG id: COG1475

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004437
- InterPro:   IPR003115
- InterPro:   IPR013741
- InterPro:   IPR011991 [H]

Pfam domain/function: PF08535 KorB; PF02195 ParBc [H]

EC number: NA

Molecular weight: Translated: 35681; Mature: 35681

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTKKPKGLGRGLEALLGPKVADKAPAGANAAGAADGPVSTLALDRLVPGIYQPRTRMDE
CCCCCCCHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCC
GALYELAESIKAQGIMQPILVRRLDDEQAQQRRQERASQGASAAMGALSASGPLYEIIAG
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHC
ERRFRASRLAGLAEVPVLVRDVPNEAAAAMALIENIQREDLNPLEEAQGLQRLIREFGLT
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCH
HELAAQAVGRSRSAASNLLRLLNLAEPVQTMLMAGDIDMGHARALLSLERAAQITAGNQI
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHH
AAKKLSVREAESLVKKLGAEFALTPQKPKKDKSRDLKRVEEELSDLLMAEVEVRVKKRVK
HHHHHHHHHHHHHHHHHCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RGSRVEEMGELAIQFGSLEALNGLIERLRGG
CCCHHHHHHHHHHHHCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MVTKKPKGLGRGLEALLGPKVADKAPAGANAAGAADGPVSTLALDRLVPGIYQPRTRMDE
CCCCCCCHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCC
GALYELAESIKAQGIMQPILVRRLDDEQAQQRRQERASQGASAAMGALSASGPLYEIIAG
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHC
ERRFRASRLAGLAEVPVLVRDVPNEAAAAMALIENIQREDLNPLEEAQGLQRLIREFGLT
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCH
HELAAQAVGRSRSAASNLLRLLNLAEPVQTMLMAGDIDMGHARALLSLERAAQITAGNQI
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHH
AAKKLSVREAESLVKKLGAEFALTPQKPKKDKSRDLKRVEEELSDLLMAEVEVRVKKRVK
HHHHHHHHHHHHHHHHHCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RGSRVEEMGELAIQFGSLEALNGLIERLRGG
CCCHHHHHHHHHHHHCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12704232; 9683477 [H]