| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is 222109274
Identifier: 222109274
GI number: 222109274
Start: 52598
End: 53140
Strand: Direct
Name: 222109274
Synonym: Dtpsy_0049
Alternate gene names: NA
Gene position: 52598-53140 (Clockwise)
Preceding gene: 222109273
Following gene: 222109275
Centisome position: 1.39
GC content: 71.09
Gene sequence:
>543_bases ATGAACCCCTCGCAGATCCTCCTCCTGCCCGGCTGGCAGAACTCCGGCCCCGGCCACTGGCAAACCGAGTGGGAGCGGCT GCATGGCTACCAGCGCGTGCAGCAGCACGACTGGATGCGTCCGTTGCGCGGCGACTGGTCCGCGCGGCTGGAAGAGGTCG TGGCCGATGCGCCGGGCGAGGTGGTGCTGGCCGCGCACAGCCTGGGGTGCATCCTCACCGCGTGGTGGGCGGCGCACACC CGCTACGCGCACAAGGTGCGCGGTGCGCTGCTGGTGGCGCCGGGCGATGTGGAGCGGCCCGACCTGGCCGCGCAGATCCC CGGCTGGGCGCCCATCGCACGCCAGGTGCTGCCCTTTCCGGCCGTGCTGGTGGGCAGCCAGGACGATCCCTACTGCAGCT TTGAGCGTGCGCAGACGCTGGCCGGTGCGTGGGGCGCACGCTTCGTGGACTGCGGGCCCCGCGGCCATATCAACGCCGAT TCCGACCTGGGCGAATGGCCCGAAGGGCACGCACTGCTGCGCGCATTGATGAACAAGGACTGA
Upstream 100 bases:
>100_bases TGAAGCGCATGTGATGCCTGGCCAAGGTCTTACCGGTCAAAATAGCCTCCAAGGCTTATTGGATAAGCGCTATAAGCTAT ATAAATAATAGTAACGCCGC
Downstream 100 bases:
>100_bases AGACACATGGTCACCAAGAAACCCAAGGGCCTGGGACGCGGCCTGGAAGCACTGCTGGGCCCCAAGGTGGCCGACAAGGC GCCCGCCGGCGCCAACGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 180; Mature: 180
Protein sequence:
>180_residues MNPSQILLLPGWQNSGPGHWQTEWERLHGYQRVQQHDWMRPLRGDWSARLEEVVADAPGEVVLAAHSLGCILTAWWAAHT RYAHKVRGALLVAPGDVERPDLAAQIPGWAPIARQVLPFPAVLVGSQDDPYCSFERAQTLAGAWGARFVDCGPRGHINAD SDLGEWPEGHALLRALMNKD
Sequences:
>Translated_180_residues MNPSQILLLPGWQNSGPGHWQTEWERLHGYQRVQQHDWMRPLRGDWSARLEEVVADAPGEVVLAAHSLGCILTAWWAAHT RYAHKVRGALLVAPGDVERPDLAAQIPGWAPIARQVLPFPAVLVGSQDDPYCSFERAQTLAGAWGARFVDCGPRGHINAD SDLGEWPEGHALLRALMNKD >Mature_180_residues MNPSQILLLPGWQNSGPGHWQTEWERLHGYQRVQQHDWMRPLRGDWSARLEEVVADAPGEVVLAAHSLGCILTAWWAAHT RYAHKVRGALLVAPGDVERPDLAAQIPGWAPIARQVLPFPAVLVGSQDDPYCSFERAQTLAGAWGARFVDCGPRGHINAD SDLGEWPEGHALLRALMNKD
Specific function: Unknown
COG id: COG3545
COG function: function code R; Predicted esterase of the alpha/beta hydrolase fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19948; Mature: 19948
Theoretical pI: Translated: 6.30; Mature: 6.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPSQILLLPGWQNSGPGHWQTEWERLHGYQRVQQHDWMRPLRGDWSARLEEVVADAPGE CCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCC VVLAAHSLGCILTAWWAAHTRYAHKVRGALLVAPGDVERPDLAAQIPGWAPIARQVLPFP EEEEHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCHHCCCCCHHHHHHHCCCC AVLVGSQDDPYCSFERAQTLAGAWGARFVDCGPRGHINADSDLGEWPEGHALLRALMNKD EEEECCCCCCCCCHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCC >Mature Secondary Structure MNPSQILLLPGWQNSGPGHWQTEWERLHGYQRVQQHDWMRPLRGDWSARLEEVVADAPGE CCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCC VVLAAHSLGCILTAWWAAHTRYAHKVRGALLVAPGDVERPDLAAQIPGWAPIARQVLPFP EEEEHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCHHCCCCCHHHHHHHCCCC AVLVGSQDDPYCSFERAQTLAGAWGARFVDCGPRGHINADSDLGEWPEGHALLRALMNKD EEEECCCCCCCCCHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA