| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
Click here to switch to the map view.
The map label for this gene is mnmG [H]
Identifier: 222109270
GI number: 222109270
Start: 48425
End: 50398
Strand: Direct
Name: mnmG [H]
Synonym: Dtpsy_0045
Alternate gene names: 222109270
Gene position: 48425-50398 (Clockwise)
Preceding gene: 222109263
Following gene: 222109271
Centisome position: 1.28
GC content: 65.45
Gene sequence:
>1974_bases ATGTTGTACCCCCAGGATTTCGATGTCATCGTCGTTGGCGGAGGCCATGCCGGCACCGAGGCCGCGCTGGCCGCCGCGCG CATGGGCAGCCGCACGCTGCTGCTCACGCACAACATCGAGACGCTGGGGCAGATGAGTTGCAACCCCAGCATCGGCGGCA TTGGCAAGGGCCACCTGGTGAAGGAGGTGGACGCGCTGGGCGGCGCCATGGCGCTGGCGACCGATGAGGCGGGCATCCAG TTCCGCATCCTCAACAGCAGCAAGGGCCCGGCCGTGCGCGCCACGCGTGCGCAGGCCGACCGCATCCTCTACAAGGCGGC CATCCGCCGCATGCTGGAGAACCAACCCAACCTGTGGTTGTTCCAGCAGGCGGTGGACGACCTGATGGTGGAGGGCGACC GCGTGGTGGGCGCCGTCACGCAGGTGGGCATCCGCTTTCGCAGTCGCGCGGTGGTGCTGACGGCGGGCACCTTCTTGGAC GGCAAGATCCATGTGGGTCTGAACAACTACGCGGCCGGCCGCGCGGGGGATCCTCCGGCCGTAAGCCTGTCGGCACGCCT GAAGGAGCTGCAGTTGCCCCAGGGACGCTTGAAGACCGGCACGCCGCCGCGCATCGACGGGCGCAGCATCGACTTCAGCC AGTGTGAGGAGCAGCCCGGCGACGGCATGCCCGGCGGTGTGAACGAGGGTGCTGTGCCTGTGTTCAGCTTCATGGGCAAT GCGGCCATGCACCCGCGCCAGGTGCCCTGCTGGATCACGCACACCAACGCGCGCACGCACGAGATCATCCGCAGCGGCTT TGACCGCAGTCCCATGTTCACCGGCAAGATCGAGGGCGTGGGCCCGCGCTACTGCCCCAGCGTGGAGGACAAGATCAACC GCTTTGCCGACAAGGAAAGCCATCAGATCTTTCTGGAGCCGGAAGGGCTGACCACGCACGAGTTCTACCCCAACGGCATC AGCACCAGCCTGCCGTTCGATATCCAGTACGACCTGGTGCGCTCGATGCGCGGCCTGGAGAACGCGCACATTCTGCGGCC GGGCTACGCCATCGAGTACGACTACTTCGACCCGCGTTCGCTCAAGAGCAGTTTCGAGACGCGGCAGATCCAGGGCCTGT TCTTCGCGGGCCAAATCAATGGCACCACAGGGTACGAGGAGGCGGCGGCGCAGGGCCTGTTCGCCGGTATCAACGCCGCG CTGCAATGCCGAGGGGAGCGTGCCTGGGTGCCCGCGCGCGACGAGGCCTATCTGGGCGTGTTGGTGGACGATCTGATCAC CAAGGGCGTGACCGAGCCCTACCGCATGTTCACCAGCCGCGCCGAGTTCCGCCTGCAGCTGCGCGAGGACAACGCCGACA TGCGCCTGACCGATGCGGGGCGTCGCATGGGTTTGGTGGACGATGCGCGCTGGGACGCTTTCAGCCGCAAGCGCGATGCG GTTTCACGTGAAACAGAGCGTTTGAAATCGACATGGGTGAACCCGCGCAACCTGCCCACGGTGGAGGCCGAGCGCGTGCT GGGTAAAGCCATCGAACATGAATACAACCTCTTCGACCTGTTGCGCCGTCCGGACGTGGGGTATGACGCACTGACGACCA TGGATGGCGGCAAGTATGCGAGCGAGGCTGTTTCACGTGAAACGTTGGGCGAGCTGAGTGCGCCCGTGATCGAGCAGGTC GAGATTGCCGCCAAGTACGCGGGCTATATCGAGCGCCAACGGGACGAGGTGCAGCGCGCCGCGCACTTCGAAAAGCTGCG CCTGCCCGAAGATCTGGACTACATGCAAGTGGCGGCCTTGTCGATTGAGGTGCGGCAAAAACTGCAGAAGCACCGGCCGG AGACGTTGGGCCAGGCGTCGCGTATTTCCGGGGTGACACCGGCGGCGATCTCGCTGCTGATGGTCCACTTGAAGAAGGGC GGTTTCAAGGGGTTTGCCCCGCAGCCGGCGGATGGGGTGGAGACGGTCGCATGA
Upstream 100 bases:
>100_bases GCCGGCAGCGCAGGCGCGAGGGTGGGGGCGGTACCGGCGCCGTGAAAGCCGGGCTTGTTCACCGTTTGACAGGGCCGCAG CGGGCCCGGAGCACCCCACC
Downstream 100 bases:
>100_bases GCGTGGTGTCGAACACAAGCCTTGAGCACGCCTTGCGTGAGGGCGCCAACGCCTTGGGGTTGGATCTGTCGGAAGCGCAA ATCACACAGCTATTGGACTT
Product: tRNA uridine 5-carboxymethylaminomethyl modification protein GidA
Products: NA
Alternate protein names: Glucose-inhibited division protein A [H]
Number of amino acids: Translated: 657; Mature: 657
Protein sequence:
>657_residues MLYPQDFDVIVVGGGHAGTEAALAAARMGSRTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDALGGAMALATDEAGIQ FRILNSSKGPAVRATRAQADRILYKAAIRRMLENQPNLWLFQQAVDDLMVEGDRVVGAVTQVGIRFRSRAVVLTAGTFLD GKIHVGLNNYAAGRAGDPPAVSLSARLKELQLPQGRLKTGTPPRIDGRSIDFSQCEEQPGDGMPGGVNEGAVPVFSFMGN AAMHPRQVPCWITHTNARTHEIIRSGFDRSPMFTGKIEGVGPRYCPSVEDKINRFADKESHQIFLEPEGLTTHEFYPNGI STSLPFDIQYDLVRSMRGLENAHILRPGYAIEYDYFDPRSLKSSFETRQIQGLFFAGQINGTTGYEEAAAQGLFAGINAA LQCRGERAWVPARDEAYLGVLVDDLITKGVTEPYRMFTSRAEFRLQLREDNADMRLTDAGRRMGLVDDARWDAFSRKRDA VSRETERLKSTWVNPRNLPTVEAERVLGKAIEHEYNLFDLLRRPDVGYDALTTMDGGKYASEAVSRETLGELSAPVIEQV EIAAKYAGYIERQRDEVQRAAHFEKLRLPEDLDYMQVAALSIEVRQKLQKHRPETLGQASRISGVTPAAISLLMVHLKKG GFKGFAPQPADGVETVA
Sequences:
>Translated_657_residues MLYPQDFDVIVVGGGHAGTEAALAAARMGSRTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDALGGAMALATDEAGIQ FRILNSSKGPAVRATRAQADRILYKAAIRRMLENQPNLWLFQQAVDDLMVEGDRVVGAVTQVGIRFRSRAVVLTAGTFLD GKIHVGLNNYAAGRAGDPPAVSLSARLKELQLPQGRLKTGTPPRIDGRSIDFSQCEEQPGDGMPGGVNEGAVPVFSFMGN AAMHPRQVPCWITHTNARTHEIIRSGFDRSPMFTGKIEGVGPRYCPSVEDKINRFADKESHQIFLEPEGLTTHEFYPNGI STSLPFDIQYDLVRSMRGLENAHILRPGYAIEYDYFDPRSLKSSFETRQIQGLFFAGQINGTTGYEEAAAQGLFAGINAA LQCRGERAWVPARDEAYLGVLVDDLITKGVTEPYRMFTSRAEFRLQLREDNADMRLTDAGRRMGLVDDARWDAFSRKRDA VSRETERLKSTWVNPRNLPTVEAERVLGKAIEHEYNLFDLLRRPDVGYDALTTMDGGKYASEAVSRETLGELSAPVIEQV EIAAKYAGYIERQRDEVQRAAHFEKLRLPEDLDYMQVAALSIEVRQKLQKHRPETLGQASRISGVTPAAISLLMVHLKKG GFKGFAPQPADGVETVA >Mature_657_residues MLYPQDFDVIVVGGGHAGTEAALAAARMGSRTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDALGGAMALATDEAGIQ FRILNSSKGPAVRATRAQADRILYKAAIRRMLENQPNLWLFQQAVDDLMVEGDRVVGAVTQVGIRFRSRAVVLTAGTFLD GKIHVGLNNYAAGRAGDPPAVSLSARLKELQLPQGRLKTGTPPRIDGRSIDFSQCEEQPGDGMPGGVNEGAVPVFSFMGN AAMHPRQVPCWITHTNARTHEIIRSGFDRSPMFTGKIEGVGPRYCPSVEDKINRFADKESHQIFLEPEGLTTHEFYPNGI STSLPFDIQYDLVRSMRGLENAHILRPGYAIEYDYFDPRSLKSSFETRQIQGLFFAGQINGTTGYEEAAAQGLFAGINAA LQCRGERAWVPARDEAYLGVLVDDLITKGVTEPYRMFTSRAEFRLQLREDNADMRLTDAGRRMGLVDDARWDAFSRKRDA VSRETERLKSTWVNPRNLPTVEAERVLGKAIEHEYNLFDLLRRPDVGYDALTTMDGGKYASEAVSRETLGELSAPVIEQV EIAAKYAGYIERQRDEVQRAAHFEKLRLPEDLDYMQVAALSIEVRQKLQKHRPETLGQASRISGVTPAAISLLMVHLKKG GFKGFAPQPADGVETVA
Specific function: NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 [H]
COG id: COG0445
COG function: function code D; NAD/FAD-utilizing enzyme apparently involved in cell division
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MnmG family [H]
Homologues:
Organism=Homo sapiens, GI74024895, Length=646, Percent_Identity=45.046439628483, Blast_Score=496, Evalue=1e-140, Organism=Homo sapiens, GI19882217, Length=671, Percent_Identity=43.3681073025335, Blast_Score=483, Evalue=1e-136, Organism=Homo sapiens, GI183227703, Length=686, Percent_Identity=42.4198250728863, Blast_Score=477, Evalue=1e-134, Organism=Escherichia coli, GI2367273, Length=642, Percent_Identity=65.8878504672897, Blast_Score=862, Evalue=0.0, Organism=Caenorhabditis elegans, GI17534255, Length=644, Percent_Identity=41.304347826087, Blast_Score=471, Evalue=1e-133, Organism=Saccharomyces cerevisiae, GI6321202, Length=635, Percent_Identity=43.7795275590551, Blast_Score=501, Evalue=1e-142, Organism=Drosophila melanogaster, GI24658174, Length=653, Percent_Identity=45.4823889739663, Blast_Score=508, Evalue=1e-144,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004416 - InterPro: IPR002218 - InterPro: IPR020595 [H]
Pfam domain/function: PF01134 GIDA [H]
EC number: NA
Molecular weight: Translated: 72345; Mature: 72345
Theoretical pI: Translated: 6.76; Mature: 6.76
Prosite motif: PS01280 GIDA_1 ; PS01281 GIDA_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLYPQDFDVIVVGGGHAGTEAALAAARMGSRTLLLTHNIETLGQMSCNPSIGGIGKGHLV CCCCCCCCEEEECCCCCCHHHHHHHHHCCCEEEEEEECHHHHHCCCCCCCCCCCCCCHHH KEVDALGGAMALATDEAGIQFRILNSSKGPAVRATRAQADRILYKAAIRRMLENQPNLWL HHHHHCCCEEEEEECCCCEEEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCEEE FQQAVDDLMVEGDRVVGAVTQVGIRFRSRAVVLTAGTFLDGKIHVGLNNYAAGRAGDPPA HHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEECEEECCEEEECCCCCCCCCCCCCCC VSLSARLKELQLPQGRLKTGTPPRIDGRSIDFSQCEEQPGDGMPGGVNEGAVPVFSFMGN EEHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHCC AAMHPRQVPCWITHTNARTHEIIRSGFDRSPMFTGKIEGVGPRYCPSVEDKINRFADKES CCCCCCCCCEEEEECCCHHHHHHHCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCC HQIFLEPEGLTTHEFYPNGISTSLPFDIQYDLVRSMRGLENAHILRPGYAIEYDYFDPRS CEEEECCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEECCCEEEEECCCCCHH LKSSFETRQIQGLFFAGQINGTTGYEEAAAQGLFAGINAALQCRGERAWVPARDEAYLGV HHHHHHHHHEEEEEEEEEECCCCCHHHHHHHHHHHHCCHHEEECCCCCCCCCCCCCHHHH LVDDLITKGVTEPYRMFTSRAEFRLQLREDNADMRLTDAGRRMGLVDDARWDAFSRKRDA HHHHHHHHCCCHHHHHHHCCCEEEEEEECCCCCEEEECCCCCCCCCCCCHHHHHHHHHHH VSRETERLKSTWVNPRNLPTVEAERVLGKAIEHEYNLFDLLRRPDVGYDALTTMDGGKYA HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHCCCCCCHHEEECCCCHHH SEAVSRETLGELSAPVIEQVEIAAKYAGYIERQRDEVQRAAHFEKLRLPEDLDYMQVAAL HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH SIEVRQKLQKHRPETLGQASRISGVTPAAISLLMVHLKKGGFKGFAPQPADGVETVA HHHHHHHHHHCCCHHHCCHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLYPQDFDVIVVGGGHAGTEAALAAARMGSRTLLLTHNIETLGQMSCNPSIGGIGKGHLV CCCCCCCCEEEECCCCCCHHHHHHHHHCCCEEEEEEECHHHHHCCCCCCCCCCCCCCHHH KEVDALGGAMALATDEAGIQFRILNSSKGPAVRATRAQADRILYKAAIRRMLENQPNLWL HHHHHCCCEEEEEECCCCEEEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCEEE FQQAVDDLMVEGDRVVGAVTQVGIRFRSRAVVLTAGTFLDGKIHVGLNNYAAGRAGDPPA HHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEECEEECCEEEECCCCCCCCCCCCCCC VSLSARLKELQLPQGRLKTGTPPRIDGRSIDFSQCEEQPGDGMPGGVNEGAVPVFSFMGN EEHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHCC AAMHPRQVPCWITHTNARTHEIIRSGFDRSPMFTGKIEGVGPRYCPSVEDKINRFADKES CCCCCCCCCEEEEECCCHHHHHHHCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCC HQIFLEPEGLTTHEFYPNGISTSLPFDIQYDLVRSMRGLENAHILRPGYAIEYDYFDPRS CEEEECCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEECCCEEEEECCCCCHH LKSSFETRQIQGLFFAGQINGTTGYEEAAAQGLFAGINAALQCRGERAWVPARDEAYLGV HHHHHHHHHEEEEEEEEEECCCCCHHHHHHHHHHHHCCHHEEECCCCCCCCCCCCCHHHH LVDDLITKGVTEPYRMFTSRAEFRLQLREDNADMRLTDAGRRMGLVDDARWDAFSRKRDA HHHHHHHHCCCHHHHHHHCCCEEEEEEECCCCCEEEECCCCCCCCCCCCHHHHHHHHHHH VSRETERLKSTWVNPRNLPTVEAERVLGKAIEHEYNLFDLLRRPDVGYDALTTMDGGKYA HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHCCCCCCHHEEECCCCHHH SEAVSRETLGELSAPVIEQVEIAAKYAGYIERQRDEVQRAAHFEKLRLPEDLDYMQVAAL HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH SIEVRQKLQKHRPETLGQASRISGVTPAAISLLMVHLKKGGFKGFAPQPADGVETVA HHHHHHHHHHCCCHHHCCHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA