| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is aroG [H]
Identifier: 222109245
GI number: 222109245
Start: 19509
End: 20609
Strand: Direct
Name: aroG [H]
Synonym: Dtpsy_0020
Alternate gene names: 222109245
Gene position: 19509-20609 (Clockwise)
Preceding gene: 222109244
Following gene: 222109246
Centisome position: 0.51
GC content: 69.03
Gene sequence:
>1101_bases ATGACCCTGACCGAACGCCTCGCATCCCCGCTCACCACCCACGACACCACGCGCATCGACGACCTGCGCATCAAAGCCGT GCGCCCGCTCATCACGCCCGCGCTGCTGCAGGAATGGCAGCCCGCGCCCGAGGCGGCGCAGACGCTGGTGGAAAGCAGCC GCGTGGCCATCTCGCGCGTGCTGCACGGGCAGGACGACCGCCTCATCGTCGTGGTGGGGCCGTGCTCCATCCACGACCAT GACCAGGCCATGGAGTACGCGCGCCTGTTGAAGGAGCAGGCGGATGCGTTGGCGCAGGACCTGCTCATCGTGATGCGCGT GTATTTCGAGAAGCCCCGCACCACCGTGGGCTGGAAGGGCTACATCAACGACCCGCACCTGGACGGCAGCTTCGCCATCA ACGAAGGCCTGGAGCGCGCCCGCGCATTGCTGCTGGACGTGCTGGCGCTGGGCCTGCCCGTGGGCACAGAGTTCCTGGAC CTGCTGTCGCCGCAGTTCATCAGCGACCTGGTGAGCTGGGGCGCCATCGGCGCGCGCACCACCGAAAGCCAGAGCCACCG GCAACTGGCCAGCGGCCTGTCCTGCCCCGTGGGCTTCAAGAACGGCACGGATGGCGGCGTGAAGGTGGCGGCCGACGCCA TCCAGGCCGCGCAGGCACCGCATGCCTTCATGGGTATGACCAAGATGGGGCAGGCGGCGATCTTCGAGACGCGCGGCAAC CACGACTGCCATGTGATCCTGCGCGGCGGCAAGGCCCCGAACTACGGCGCGGCCGACGTGCAGGCCGCCTGCGAGATGCT GGGGAAGGCCGGCCAGCGCCCGCAGGTGATGATCGACCTGTCGCATGCCAACAGCAGCAAGCAGCACCGCCGCCAGATCG ACGTGGCGCAGGACGTGGCCCAGCAGATCGCCGCGGGCGATGCACGCATCACCGGCGTGATGATCGAGAGCCACCTGCAG GAGGGCCGCCAGGACATCGTGGACGGCCAGCCGCTCACACCCGGCGTGTCGGTCACCGACGCTTGCATCAGCTTCGCACA GACCGTGCCGGTACTGCACCAGTTGGCTGCGGCCGTGCGCGAACGCCGCACGCGCGGCTGA
Upstream 100 bases:
>100_bases ACAGGCGGTGTTACCTTCCTTCACCGCCACCTGCCGCCGGGGCAGGGCGCCGAACTCCCCGGACAGGCGCTCACGCGGGT AGCGCGACAATCGGGGCACC
Downstream 100 bases:
>100_bases CACGCTCCGGCGCCGTCGCGGCAGAAAAGAAGGAGGGCGCCCATGTACCATCAGTCACATCCGCCCGCCTTTTGGGCCAG AAGCGTCCGCCATGTTCTTC
Product: phospho-2-dehydro-3-deoxyheptonate aldolase
Products: NA
Alternate protein names: 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase; DAHP synthase; Phospho-2-keto-3-deoxyheptonate aldolase [H]
Number of amino acids: Translated: 366; Mature: 365
Protein sequence:
>366_residues MTLTERLASPLTTHDTTRIDDLRIKAVRPLITPALLQEWQPAPEAAQTLVESSRVAISRVLHGQDDRLIVVVGPCSIHDH DQAMEYARLLKEQADALAQDLLIVMRVYFEKPRTTVGWKGYINDPHLDGSFAINEGLERARALLLDVLALGLPVGTEFLD LLSPQFISDLVSWGAIGARTTESQSHRQLASGLSCPVGFKNGTDGGVKVAADAIQAAQAPHAFMGMTKMGQAAIFETRGN HDCHVILRGGKAPNYGAADVQAACEMLGKAGQRPQVMIDLSHANSSKQHRRQIDVAQDVAQQIAAGDARITGVMIESHLQ EGRQDIVDGQPLTPGVSVTDACISFAQTVPVLHQLAAAVRERRTRG
Sequences:
>Translated_366_residues MTLTERLASPLTTHDTTRIDDLRIKAVRPLITPALLQEWQPAPEAAQTLVESSRVAISRVLHGQDDRLIVVVGPCSIHDH DQAMEYARLLKEQADALAQDLLIVMRVYFEKPRTTVGWKGYINDPHLDGSFAINEGLERARALLLDVLALGLPVGTEFLD LLSPQFISDLVSWGAIGARTTESQSHRQLASGLSCPVGFKNGTDGGVKVAADAIQAAQAPHAFMGMTKMGQAAIFETRGN HDCHVILRGGKAPNYGAADVQAACEMLGKAGQRPQVMIDLSHANSSKQHRRQIDVAQDVAQQIAAGDARITGVMIESHLQ EGRQDIVDGQPLTPGVSVTDACISFAQTVPVLHQLAAAVRERRTRG >Mature_365_residues TLTERLASPLTTHDTTRIDDLRIKAVRPLITPALLQEWQPAPEAAQTLVESSRVAISRVLHGQDDRLIVVVGPCSIHDHD QAMEYARLLKEQADALAQDLLIVMRVYFEKPRTTVGWKGYINDPHLDGSFAINEGLERARALLLDVLALGLPVGTEFLDL LSPQFISDLVSWGAIGARTTESQSHRQLASGLSCPVGFKNGTDGGVKVAADAIQAAQAPHAFMGMTKMGQAAIFETRGNH DCHVILRGGKAPNYGAADVQAACEMLGKAGQRPQVMIDLSHANSSKQHRRQIDVAQDVAQQIAAGDARITGVMIESHLQE GRQDIVDGQPLTPGVSVTDACISFAQTVPVLHQLAAAVRERRTRG
Specific function: Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) [H]
COG id: COG0722
COG function: function code E; 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I DAHP synthase family [H]
Homologues:
Organism=Escherichia coli, GI1786969, Length=344, Percent_Identity=61.3372093023256, Blast_Score=427, Evalue=1e-121, Organism=Escherichia coli, GI1787996, Length=346, Percent_Identity=52.8901734104046, Blast_Score=376, Evalue=1e-105, Organism=Escherichia coli, GI1788953, Length=341, Percent_Identity=53.0791788856305, Blast_Score=354, Evalue=4e-99, Organism=Saccharomyces cerevisiae, GI6319726, Length=348, Percent_Identity=56.0344827586207, Blast_Score=357, Evalue=1e-99, Organism=Saccharomyces cerevisiae, GI6320240, Length=357, Percent_Identity=49.2997198879552, Blast_Score=336, Evalue=4e-93,
Paralogues:
None
Copy number: 600 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR006218 - InterPro: IPR006219 [H]
Pfam domain/function: PF00793 DAHP_synth_1 [H]
EC number: =2.5.1.54 [H]
Molecular weight: Translated: 39540; Mature: 39408
Theoretical pI: Translated: 6.57; Mature: 6.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLTERLASPLTTHDTTRIDDLRIKAVRPLITPALLQEWQPAPEAAQTLVESSRVAISRV CCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH LHGQDDRLIVVVGPCSIHDHDQAMEYARLLKEQADALAQDLLIVMRVYFEKPRTTVGWKG HCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC YINDPHLDGSFAINEGLERARALLLDVLALGLPVGTEFLDLLSPQFISDLVSWGAIGART CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCHHHHHHHHHHCCCCCCC TESQSHRQLASGLSCPVGFKNGTDGGVKVAADAIQAAQAPHAFMGMTKMGQAAIFETRGN CCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCHHEEECCCC HDCHVILRGGKAPNYGAADVQAACEMLGKAGQRPQVMIDLSHANSSKQHRRQIDVAQDVA CCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHH QQIAAGDARITGVMIESHLQEGRQDIVDGQPLTPGVSVTDACISFAQTVPVLHQLAAAVR HHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH ERRTRG HHHCCC >Mature Secondary Structure TLTERLASPLTTHDTTRIDDLRIKAVRPLITPALLQEWQPAPEAAQTLVESSRVAISRV CCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH LHGQDDRLIVVVGPCSIHDHDQAMEYARLLKEQADALAQDLLIVMRVYFEKPRTTVGWKG HCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC YINDPHLDGSFAINEGLERARALLLDVLALGLPVGTEFLDLLSPQFISDLVSWGAIGART CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCHHHHHHHHHHCCCCCCC TESQSHRQLASGLSCPVGFKNGTDGGVKVAADAIQAAQAPHAFMGMTKMGQAAIFETRGN CCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCHHEEECCCC HDCHVILRGGKAPNYGAADVQAACEMLGKAGQRPQVMIDLSHANSSKQHRRQIDVAQDVA CCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHH QQIAAGDARITGVMIESHLQEGRQDIVDGQPLTPGVSVTDACISFAQTVPVLHQLAAAVR HHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH ERRTRG HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]