| Definition | Agrobacterium vitis S4 plasmid pAtS4e, complete sequence. |
|---|---|
| Accession | NC_011981 |
| Length | 631,775 |
Click here to switch to the map view.
The map label for this gene is cyp128 [H]
Identifier: 222102928
GI number: 222102928
Start: 613702
End: 614919
Strand: Reverse
Name: cyp128 [H]
Synonym: Avi_7683
Alternate gene names: 222102928
Gene position: 614919-613702 (Counterclockwise)
Preceding gene: 222102929
Following gene: 222102927
Centisome position: 97.33
GC content: 60.18
Gene sequence:
>1218_bases ATGATCGAAGGGCATCGCGTTTTCGAACCTGCCGAAGGCATCCCCGTCTGGGATATCGATCCTTACGACGAGGCGGTCCT CGCTGATCCGAACGCCTATTATGCAGAGCTGCGTGCGAAGGGGCCGCTGGTCTATATTCCAAAATATTCCATTCTCGCAT CCGGCCGCTATGAGGAGACGAAGGAAATTTTTTCCGACCACGCGCGCTTCGTCTCCTCAAGGGGAGTTGGCCTGAATGAT TTCCGCTATGGTACGCCCTGGCGTCCGCCGTCAATCATCCTGGAAGTGGACCCGCCGGAGCACGCACGCACGCGCAAGGT CATGGCGCGGGCTCTTTCCCCCAAGGCCATCTCGAAATTCAAGGAGGATTTCCGTGTGAAGGCCGTGGAGATCGTGGATG CGCTTCTGGAAAAGCGACGTTTCGAAGCGGTGGTGGAACTTGCAGAGGCCTTTCCAACCGCTGTTTTTCCCGAGGCGCTC GGAATGGTGGATCACGACCCGCGTCCCCTGGTCGATTACGGCGCGATGGTTTTCAACTCCATGGGGCCGGACAACGCGCT GCGCCGCAAGGCTGGTGCCATGATCCCCGAAATCGTTCCCTGGATCATGTCCGCCTGCGCCCGCTCGCGGCTGCGCCCTG ACGGCATGGGGGCGATCATTTACGAAGCGGCGGATGCCGGAGAAATCACGCAGGAAGAAGCCGGTTTGCTGATCCGCTCG TTCCTGTCAGCCGGGGTCGACACGACCGTGACCGGGATCGGCAATGCCCTTTGGTGCCTCGCATCCAATCCGGCGGAATA CGAACGGCTCAAGGTCGACCCTTCGCTGGCACGCCCCTGCTTCGAGGAGGTTCTGCGGTATACATCTCCGGTGCACACAT TCGGTCGGACCGCCGCTGTCGATACCGAAATCGCAGGTTTGAAGATCGCCGAAGGCAGCAAGATCATTTGCGTCCTTGGG GCGGCTAACCTGGACCCAGAGAAATGGGAGGCCCCGGAAAGCTTCCGCATAGACCGCAGGCCGGCAGGACATATGGCGTT CGGGGCGGGCATCCACGGTTGCGTTGGGCAGAACATCGCGCGGCTGGAACTCGAAACACTGCTCACGGTGATGGCGGCGA AAGTGGACCGCATTGAATTCGACGGAGAGGTCGTCTGGCGTCCCAACAACGCAATCCATGCCCTCGACCGCATGCCTCTC GAATTCATCGCGAAATAG
Upstream 100 bases:
>100_bases CGGCCGCGATAGCCTTGCCATGGGCGAGCAACAGCTGGATTGACGCCCTCGAAGGTCGGCGGCAGCTGCTCCAAGGCGCG AGGAGGACATCGCTGTGAAC
Downstream 100 bases:
>100_bases GAGATCACATGACCAGGATCACTTTCATCTCCCATAACGGCGCGCAATCGGTTGTCGATGCCGCCGACGGTGATAGCGTC ATGCGCGTGGCACTTACGAA
Product: cytochrome P450 hydroxylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 405; Mature: 405
Protein sequence:
>405_residues MIEGHRVFEPAEGIPVWDIDPYDEAVLADPNAYYAELRAKGPLVYIPKYSILASGRYEETKEIFSDHARFVSSRGVGLND FRYGTPWRPPSIILEVDPPEHARTRKVMARALSPKAISKFKEDFRVKAVEIVDALLEKRRFEAVVELAEAFPTAVFPEAL GMVDHDPRPLVDYGAMVFNSMGPDNALRRKAGAMIPEIVPWIMSACARSRLRPDGMGAIIYEAADAGEITQEEAGLLIRS FLSAGVDTTVTGIGNALWCLASNPAEYERLKVDPSLARPCFEEVLRYTSPVHTFGRTAAVDTEIAGLKIAEGSKIICVLG AANLDPEKWEAPESFRIDRRPAGHMAFGAGIHGCVGQNIARLELETLLTVMAAKVDRIEFDGEVVWRPNNAIHALDRMPL EFIAK
Sequences:
>Translated_405_residues MIEGHRVFEPAEGIPVWDIDPYDEAVLADPNAYYAELRAKGPLVYIPKYSILASGRYEETKEIFSDHARFVSSRGVGLND FRYGTPWRPPSIILEVDPPEHARTRKVMARALSPKAISKFKEDFRVKAVEIVDALLEKRRFEAVVELAEAFPTAVFPEAL GMVDHDPRPLVDYGAMVFNSMGPDNALRRKAGAMIPEIVPWIMSACARSRLRPDGMGAIIYEAADAGEITQEEAGLLIRS FLSAGVDTTVTGIGNALWCLASNPAEYERLKVDPSLARPCFEEVLRYTSPVHTFGRTAAVDTEIAGLKIAEGSKIICVLG AANLDPEKWEAPESFRIDRRPAGHMAFGAGIHGCVGQNIARLELETLLTVMAAKVDRIEFDGEVVWRPNNAIHALDRMPL EFIAK >Mature_405_residues MIEGHRVFEPAEGIPVWDIDPYDEAVLADPNAYYAELRAKGPLVYIPKYSILASGRYEETKEIFSDHARFVSSRGVGLND FRYGTPWRPPSIILEVDPPEHARTRKVMARALSPKAISKFKEDFRVKAVEIVDALLEKRRFEAVVELAEAFPTAVFPEAL GMVDHDPRPLVDYGAMVFNSMGPDNALRRKAGAMIPEIVPWIMSACARSRLRPDGMGAIIYEAADAGEITQEEAGLLIRS FLSAGVDTTVTGIGNALWCLASNPAEYERLKVDPSLARPCFEEVLRYTSPVHTFGRTAAVDTEIAGLKIAEGSKIICVLG AANLDPEKWEAPESFRIDRRPAGHMAFGAGIHGCVGQNIARLELETLLTVMAAKVDRIEFDGEVVWRPNNAIHALDRMPL EFIAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytochrome P450 family [H]
Homologues:
Organism=Homo sapiens, GI187960086, Length=206, Percent_Identity=26.2135922330097, Blast_Score=71, Evalue=2e-12, Organism=Homo sapiens, GI195972896, Length=160, Percent_Identity=31.25, Blast_Score=68, Evalue=1e-11, Organism=Homo sapiens, GI195972898, Length=160, Percent_Identity=31.25, Blast_Score=68, Evalue=1e-11, Organism=Homo sapiens, GI261278372, Length=160, Percent_Identity=31.25, Blast_Score=68, Evalue=1e-11, Organism=Homo sapiens, GI261278370, Length=160, Percent_Identity=31.25, Blast_Score=68, Evalue=2e-11, Organism=Drosophila melanogaster, GI24642101, Length=172, Percent_Identity=28.4883720930233, Blast_Score=67, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001128 - InterPro: IPR002397 - InterPro: IPR017972 [H]
Pfam domain/function: PF00067 p450 [H]
EC number: NA
Molecular weight: Translated: 44746; Mature: 44746
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: PS00086 CYTOCHROME_P450
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEGHRVFEPAEGIPVWDIDPYDEAVLADPNAYYAELRAKGPLVYIPKYSILASGRYEET CCCCCCCCCCCCCCEECCCCCCCCCEEECCCHHHHHHCCCCCEEEECCHHEEECCCHHHH KEIFSDHARFVSSRGVGLNDFRYGTPWRPPSIILEVDPPEHARTRKVMARALSPKAISKF HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCHHHHHHH KEDFRVKAVEIVDALLEKRRFEAVVELAEAFPTAVFPEALGMVDHDPRPLVDYGAMVFNS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHC MGPDNALRRKAGAMIPEIVPWIMSACARSRLRPDGMGAIIYEAADAGEITQEEAGLLIRS CCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCHHHHHHHHHH FLSAGVDTTVTGIGNALWCLASNPAEYERLKVDPSLARPCFEEVLRYTSPVHTFGRTAAV HHHCCCCHHHHHCCCEEEEEECCCCHHHHEECCHHHHHHHHHHHHHHCCCHHHHCCCCCC DTEIAGLKIAEGSKIICVLGAANLDPEKWEAPESFRIDRRPAGHMAFGAGIHGCVGQNIA CCHHCCEEEECCCEEEEEEECCCCCHHHCCCCCCCCCCCCCCCCEEECCCCHHHHCCCHH RLELETLLTVMAAKVDRIEFDGEVVWRPNNAIHALDRMPLEFIAK HHHHHHHHHHHHHHHHHEEECCEEEECCCCHHHHHHCCCHHHHCC >Mature Secondary Structure MIEGHRVFEPAEGIPVWDIDPYDEAVLADPNAYYAELRAKGPLVYIPKYSILASGRYEET CCCCCCCCCCCCCCEECCCCCCCCCEEECCCHHHHHHCCCCCEEEECCHHEEECCCHHHH KEIFSDHARFVSSRGVGLNDFRYGTPWRPPSIILEVDPPEHARTRKVMARALSPKAISKF HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCHHHHHHH KEDFRVKAVEIVDALLEKRRFEAVVELAEAFPTAVFPEALGMVDHDPRPLVDYGAMVFNS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHC MGPDNALRRKAGAMIPEIVPWIMSACARSRLRPDGMGAIIYEAADAGEITQEEAGLLIRS CCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCHHHHHHHHHH FLSAGVDTTVTGIGNALWCLASNPAEYERLKVDPSLARPCFEEVLRYTSPVHTFGRTAAV HHHCCCCHHHHHCCCEEEEEECCCCHHHHEECCHHHHHHHHHHHHHHCCCHHHHCCCCCC DTEIAGLKIAEGSKIICVLGAANLDPEKWEAPESFRIDRRPAGHMAFGAGIHGCVGQNIA CCHHCCEEEECCCEEEEEEECCCCCHHHCCCCCCCCCCCCCCCCEEECCCCHHHHCCCHH RLELETLLTVMAAKVDRIEFDGEVVWRPNNAIHALDRMPLEFIAK HHHHHHHHHHHHHHHHHEEECCEEEECCCCHHHHHHCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]