| Definition | Agrobacterium vitis S4 plasmid pAtS4e, complete sequence. |
|---|---|
| Accession | NC_011981 |
| Length | 631,775 |
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The map label for this gene is gltJ [H]
Identifier: 222102913
GI number: 222102913
Start: 598067
End: 598774
Strand: Direct
Name: gltJ [H]
Synonym: Avi_7663
Alternate gene names: 222102913
Gene position: 598067-598774 (Clockwise)
Preceding gene: 222102912
Following gene: 222102914
Centisome position: 94.66
GC content: 54.52
Gene sequence:
>708_bases TTGAAGGGGTTCGATCTCTCAGCAATTCTTGGCAATCCAGACTATGTCTCCATGCTGCTGCACGGCATAGAGATGACCTT CATTATCGCCATTGGCTCATGGGTTTTGGCGATGACACTTGCGGTTTTACTGCTGGCGCTGCGGTTTTCGCCGGGCGGTA TCGGCAATGCCATTGTCACGGCCTATGTTTCCTATCACCGCAATGTGCCAACGCTTGTGCAGCTGGTGCTGTGGTATTTT GGCATTTTCACCCTGATGCCCAGCGGCCTCAGCGCATGGCTGGTCAATCACAATGCCGAAACCATCTTTGCGGTTATCGG TCTTGGCCTGTGTCAGGCCGCTTACTTCAGCGAAGACCTGCGCTCAGGCCTGCGCTCCATCAGCCCAGGCCAGATGGAAG CGGCCCGCGCCTTGGGCCACGGCTATCTCTCGGCCATGCGTTACGTGATGATTCCGCAAGGGGTGCGCAATGCACTGCCA CCGCTGATCAATCATACGGTATCGCTGTTTAAAAACAGCAGTCTTGCGATTGTTGTTGGTGCGTCAGAGCTTACCCATGC CGTGAAGGAAATCGAAAACATCACCTTCAGAACATTTGAGAGCTATCTGATTGGCACGGTGCTGTATCTGTTCTTTTCTC TGCTGATCATGGCAGGCGGCGCGTATCTGCAGTGGCGCGTTGATCATGCAAGGGGTGTGCGGGCATGA
Upstream 100 bases:
>100_bases TTGCCGCACCCATTGCCGTTAACATCGGCCATATGGAAATCACCCCCACCCTACAAGTGATGGGCGGATTGCAGACGGCC AAGCCGGAGGAGCGGAAGCC
Downstream 100 bases:
>100_bases TCCACGACATCATCAAGATTGTGCAGGACTATTGGTTGCTGTTGTTGATCGGCCAATATCCCAATGGCCCGCTCGGTGGC CTTGCCAACACGCTGATCCT
Product: ABC transporter membrane spanning protein (amino acid)
Products: ADP; phosphate; L-glutamate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 235; Mature: 235
Protein sequence:
>235_residues MKGFDLSAILGNPDYVSMLLHGIEMTFIIAIGSWVLAMTLAVLLLALRFSPGGIGNAIVTAYVSYHRNVPTLVQLVLWYF GIFTLMPSGLSAWLVNHNAETIFAVIGLGLCQAAYFSEDLRSGLRSISPGQMEAARALGHGYLSAMRYVMIPQGVRNALP PLINHTVSLFKNSSLAIVVGASELTHAVKEIENITFRTFESYLIGTVLYLFFSLLIMAGGAYLQWRVDHARGVRA
Sequences:
>Translated_235_residues MKGFDLSAILGNPDYVSMLLHGIEMTFIIAIGSWVLAMTLAVLLLALRFSPGGIGNAIVTAYVSYHRNVPTLVQLVLWYF GIFTLMPSGLSAWLVNHNAETIFAVIGLGLCQAAYFSEDLRSGLRSISPGQMEAARALGHGYLSAMRYVMIPQGVRNALP PLINHTVSLFKNSSLAIVVGASELTHAVKEIENITFRTFESYLIGTVLYLFFSLLIMAGGAYLQWRVDHARGVRA >Mature_235_residues MKGFDLSAILGNPDYVSMLLHGIEMTFIIAIGSWVLAMTLAVLLLALRFSPGGIGNAIVTAYVSYHRNVPTLVQLVLWYF GIFTLMPSGLSAWLVNHNAETIFAVIGLGLCQAAYFSEDLRSGLRSISPGQMEAARALGHGYLSAMRYVMIPQGVRNALP PLINHTVSLFKNSSLAIVVGASELTHAVKEIENITFRTFESYLIGTVLYLFFSLLIMAGGAYLQWRVDHARGVRA
Specific function: Part of the binding-protein-dependent transport system for aspartate/glutamate; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0765
COG function: function code E; ABC-type amino acid transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786874, Length=218, Percent_Identity=28.8990825688073, Blast_Score=104, Evalue=5e-24, Organism=Escherichia coli, GI1788226, Length=202, Percent_Identity=32.6732673267327, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI1786873, Length=216, Percent_Identity=29.6296296296296, Blast_Score=87, Evalue=8e-19, Organism=Escherichia coli, GI1787030, Length=215, Percent_Identity=32.093023255814, Blast_Score=84, Evalue=9e-18, Organism=Escherichia coli, GI87082239, Length=213, Percent_Identity=28.169014084507, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI1788646, Length=201, Percent_Identity=26.865671641791, Blast_Score=73, Evalue=1e-14, Organism=Escherichia coli, GI1788645, Length=198, Percent_Identity=27.2727272727273, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI1787087, Length=184, Percent_Identity=27.7173913043478, Blast_Score=66, Evalue=2e-12, Organism=Escherichia coli, GI48994930, Length=112, Percent_Identity=33.0357142857143, Blast_Score=65, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 25684; Mature: 25684
Theoretical pI: Translated: 8.90; Mature: 8.90
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGFDLSAILGNPDYVSMLLHGIEMTFIIAIGSWVLAMTLAVLLLALRFSPGGIGNAIVT CCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH AYVSYHRNVPTLVQLVLWYFGIFTLMPSGLSAWLVNHNAETIFAVIGLGLCQAAYFSEDL HHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH RSGLRSISPGQMEAARALGHGYLSAMRYVMIPQGVRNALPPLINHTVSLFKNSSLAIVVG HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHCCCCEEEEEC ASELTHAVKEIENITFRTFESYLIGTVLYLFFSLLIMAGGAYLQWRVDHARGVRA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCC >Mature Secondary Structure MKGFDLSAILGNPDYVSMLLHGIEMTFIIAIGSWVLAMTLAVLLLALRFSPGGIGNAIVT CCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH AYVSYHRNVPTLVQLVLWYFGIFTLMPSGLSAWLVNHNAETIFAVIGLGLCQAAYFSEDL HHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH RSGLRSISPGQMEAARALGHGYLSAMRYVMIPQGVRNALPPLINHTVSLFKNSSLAIVVG HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHCCCCEEEEEC ASELTHAVKEIENITFRTFESYLIGTVLYLFFSLLIMAGGAYLQWRVDHARGVRA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-glutamate [Periplasm]; H2O [C]
Specific reaction: ATP + L-glutamate [Periplasm] + H2O = ADP + phosphate + L-glutamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]