| Definition | Agrobacterium vitis S4 plasmid pAtS4e, complete sequence. |
|---|---|
| Accession | NC_011981 |
| Length | 631,775 |
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The map label for this gene is 222102851
Identifier: 222102851
GI number: 222102851
Start: 526988
End: 528259
Strand: Direct
Name: 222102851
Synonym: Avi_7583
Alternate gene names: NA
Gene position: 526988-528259 (Clockwise)
Preceding gene: 222102850
Following gene: 222102852
Centisome position: 83.41
GC content: 59.59
Gene sequence:
>1272_bases ATGACCCGATCCCTGAAGCCGCATTACAGCGCCGTCGTCGTGGGAGGCGGCCAGGCCGGCCTCTCCGCCAGCCATTACCT TAGGAAACACGGTATCGACCATGTCGTTTTCGAAAAGAAGACTGTCGCCCACAAATGGAAGGATGAGCGCTGGGATGCCT TCTGTCTGGTCACTCCAAACTGGCAATGCCAGCTGCCCGACCATCCCTATGACGGTGCCGATCCGCACGGATTCATGGTG AAGGAGGAGATCGTCGCCTATGTTGATCGCTTCGTCAAAAAGGTCGATGCGCCCGTTTTAGAAGGCACCAGCGTGACCGC GCTGGAGAAAACGGGAGAGCTGTTCCAGATCGAATCGACGGCGGGCACCATCACCGCCGACAGCGTCATTCTCGCCACCA GCCTCTACAGCCAGCCCTTCGTGCCGCGTGCCGCAGAACGCATTCCCGATGGCATAGCCCAGATCCATACGGCCGATTAT CGCAATCCCGCGCAACTGCCGCCAGGCGGCGTCATCGTTGTCGGGTCCGGCCAATCCGGCTGCCAGATTGCCGAGGACCT GCATCTTGCTGGCCGCAAGGTTCATATGGTCACCGGCAATGCACCACGCTGCGCCCGCTTCTACCGGGGCCGCGATGTCG TCGATTGGCTGGCCGATATCGGGCAATATGACATCACCATCGCCCATGACGGTATGGCGAAAAAGAAGCATGATACCAAC CATTACCTGACCGGACGCGATGGCGGACGCGATATCGATCTTCGAAAATTCGCGCTGGAAGGCATGGCCCTTTATGGTCG CATGACCGGCGTTTCCGCCGGAAAAATGCTGTTCGAGACCAATCTGAAGAGCAATCTCGACAGCGCCGACCGGGTGTATA ACGGCATCAATGCCCTCATTGATCGCCATATTGCGGAAAAAGGCATCCATGCACCGGCAGGTGGACCTTACGTTGCGCTC TGGGAACCGCAGAGTGAAACGACCGAGCTGGACTTTGAGGCCGAAGACGTCACGTCGGTCATCTGGGCGACGGGCTTTAC CCCTGATTGGTCCTATGTCGGATTACCGATCTTCGATGGCACCGGCTATCCGATCCAGCGCCGCGGCGTCACCGGCATCA AGGGCGTCTATGTCCTCGGCCTGCCCTGGCTCTGGACCTGGGGGTCCGGCCGGTTCCTCTCAGTCGGCAAGGATGCCGAA TATGTGGTGGACCATCTGGCGAGGCAGCTGGAGCAGGCCAAGCGCCCGCAAATGCAAGCGGCGAACGGATAA
Upstream 100 bases:
>100_bases ACGACCAGCTCGCCCGCATCGAAACCGCCGCCCTCCCCTTCCTCGAGCGCGCCGATGCCCGCGTCCGCTGCGAGACCTTT ATCCTGTGAAAGGACATACG
Downstream 100 bases:
>100_bases GCGATGAACCTCGCATTGCGCACGTCATGCTCATTGAATGCACCCTCGAGCCGCGATCTCATGGACCGCGCGCTCGAGCC TCACCTGCTGATCGGCATGC
Product: flavin-containing monooxygenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 423; Mature: 422
Protein sequence:
>423_residues MTRSLKPHYSAVVVGGGQAGLSASHYLRKHGIDHVVFEKKTVAHKWKDERWDAFCLVTPNWQCQLPDHPYDGADPHGFMV KEEIVAYVDRFVKKVDAPVLEGTSVTALEKTGELFQIESTAGTITADSVILATSLYSQPFVPRAAERIPDGIAQIHTADY RNPAQLPPGGVIVVGSGQSGCQIAEDLHLAGRKVHMVTGNAPRCARFYRGRDVVDWLADIGQYDITIAHDGMAKKKHDTN HYLTGRDGGRDIDLRKFALEGMALYGRMTGVSAGKMLFETNLKSNLDSADRVYNGINALIDRHIAEKGIHAPAGGPYVAL WEPQSETTELDFEAEDVTSVIWATGFTPDWSYVGLPIFDGTGYPIQRRGVTGIKGVYVLGLPWLWTWGSGRFLSVGKDAE YVVDHLARQLEQAKRPQMQAANG
Sequences:
>Translated_423_residues MTRSLKPHYSAVVVGGGQAGLSASHYLRKHGIDHVVFEKKTVAHKWKDERWDAFCLVTPNWQCQLPDHPYDGADPHGFMV KEEIVAYVDRFVKKVDAPVLEGTSVTALEKTGELFQIESTAGTITADSVILATSLYSQPFVPRAAERIPDGIAQIHTADY RNPAQLPPGGVIVVGSGQSGCQIAEDLHLAGRKVHMVTGNAPRCARFYRGRDVVDWLADIGQYDITIAHDGMAKKKHDTN HYLTGRDGGRDIDLRKFALEGMALYGRMTGVSAGKMLFETNLKSNLDSADRVYNGINALIDRHIAEKGIHAPAGGPYVAL WEPQSETTELDFEAEDVTSVIWATGFTPDWSYVGLPIFDGTGYPIQRRGVTGIKGVYVLGLPWLWTWGSGRFLSVGKDAE YVVDHLARQLEQAKRPQMQAANG >Mature_422_residues TRSLKPHYSAVVVGGGQAGLSASHYLRKHGIDHVVFEKKTVAHKWKDERWDAFCLVTPNWQCQLPDHPYDGADPHGFMVK EEIVAYVDRFVKKVDAPVLEGTSVTALEKTGELFQIESTAGTITADSVILATSLYSQPFVPRAAERIPDGIAQIHTADYR NPAQLPPGGVIVVGSGQSGCQIAEDLHLAGRKVHMVTGNAPRCARFYRGRDVVDWLADIGQYDITIAHDGMAKKKHDTNH YLTGRDGGRDIDLRKFALEGMALYGRMTGVSAGKMLFETNLKSNLDSADRVYNGINALIDRHIAEKGIHAPAGGPYVALW EPQSETTELDFEAEDVTSVIWATGFTPDWSYVGLPIFDGTGYPIQRRGVTGIKGVYVLGLPWLWTWGSGRFLSVGKDAEY VVDHLARQLEQAKRPQMQAANG
Specific function: Unknown
COG id: COG2072
COG function: function code P; Predicted flavoprotein involved in K+ transport
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013027 - InterPro: IPR000103 [H]
Pfam domain/function: PF07992 Pyr_redox_2 [H]
EC number: NA
Molecular weight: Translated: 46499; Mature: 46368
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRSLKPHYSAVVVGGGQAGLSASHYLRKHGIDHVVFEKKTVAHKWKDERWDAFCLVTPN CCCCCCCCCEEEEEECCCCCCCHHHHHHHCCCCEEEECCHHHHHHCCCCCCCEEEEECCC WQCQLPDHPYDGADPHGFMVKEEIVAYVDRFVKKVDAPVLEGTSVTALEKTGELFQIEST CEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCEEEEECC AGTITADSVILATSLYSQPFVPRAAERIPDGIAQIHTADYRNPAQLPPGGVIVVGSGQSG CCCEEECCEEEEHHHHCCCCCCHHHHHCCHHHHHHHHCCCCCCCCCCCCCEEEECCCCCC CQIAEDLHLAGRKVHMVTGNAPRCARFYRGRDVVDWLADIGQYDITIAHDGMAKKKHDTN CHHHHHHHHCCCEEEEEECCCCHHHHHHCCCHHHHHHHCCCCEEEEEEECCCCCCCCCCC HYLTGRDGGRDIDLRKFALEGMALYGRMTGVSAGKMLFETNLKSNLDSADRVYNGINALI CEEECCCCCCCCHHHHHHHHHHHEEHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHH DRHIAEKGIHAPAGGPYVALWEPQSETTELDFEAEDVTSVIWATGFTPDWSYVGLPIFDG HHHHHHCCCCCCCCCCEEEEECCCCCCEEECCCHHHHHHHHHCCCCCCCCCEEEEEEECC TGYPIQRRGVTGIKGVYVLGLPWLWTWGSGRFLSVGKDAEYVVDHLARQLEQAKRPQMQA CCCCEECCCCCCCCEEEEEECCEEEECCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCC ANG CCC >Mature Secondary Structure TRSLKPHYSAVVVGGGQAGLSASHYLRKHGIDHVVFEKKTVAHKWKDERWDAFCLVTPN CCCCCCCCEEEEEECCCCCCCHHHHHHHCCCCEEEECCHHHHHHCCCCCCCEEEEECCC WQCQLPDHPYDGADPHGFMVKEEIVAYVDRFVKKVDAPVLEGTSVTALEKTGELFQIEST CEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCEEEEECC AGTITADSVILATSLYSQPFVPRAAERIPDGIAQIHTADYRNPAQLPPGGVIVVGSGQSG CCCEEECCEEEEHHHHCCCCCCHHHHHCCHHHHHHHHCCCCCCCCCCCCCEEEECCCCCC CQIAEDLHLAGRKVHMVTGNAPRCARFYRGRDVVDWLADIGQYDITIAHDGMAKKKHDTN CHHHHHHHHCCCEEEEEECCCCHHHHHHCCCHHHHHHHCCCCEEEEEEECCCCCCCCCCC HYLTGRDGGRDIDLRKFALEGMALYGRMTGVSAGKMLFETNLKSNLDSADRVYNGINALI CEEECCCCCCCCHHHHHHHHHHHEEHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHH DRHIAEKGIHAPAGGPYVALWEPQSETTELDFEAEDVTSVIWATGFTPDWSYVGLPIFDG HHHHHHCCCCCCCCCCEEEEECCCCCCEEECCCHHHHHHHHHCCCCCCCCCEEEEEEECC TGYPIQRRGVTGIKGVYVLGLPWLWTWGSGRFLSVGKDAEYVVDHLARQLEQAKRPQMQA CCCCEECCCCCCCCEEEEEECCEEEECCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCC ANG CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA