Definition Agrobacterium vitis S4 plasmid pAtS4e, complete sequence.
Accession NC_011981
Length 631,775

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The map label for this gene is 222102850

Identifier: 222102850

GI number: 222102850

Start: 526698

End: 526976

Strand: Direct

Name: 222102850

Synonym: Avi_7582

Alternate gene names: NA

Gene position: 526698-526976 (Clockwise)

Preceding gene: 222102849

Following gene: 222102851

Centisome position: 83.37

GC content: 59.5

Gene sequence:

>279_bases
ATGCGCTTTGTCATCACTTGGCCCGATGGCCAGGAAGAGACCTGTTATTCACCCTCGCTGATCATCCGCGAGTTCTTCAC
CGAGGGTGAAAGTTATCCGGTGGCGGATTTTGTCGAGCGCAGCCGAAAAGCGCTCACCATCGCCAGTGATCGCGTCGAGG
CAAAATACGGATTTGCCTGCTCATCCGCAAACGACCAGCTCGCCCGCATCGAAACCGCCGCCCTCCCCTTCCTCGAGCGC
GCCGATGCCCGCGTCCGCTGCGAGACCTTTATCCTGTGA

Upstream 100 bases:

>100_bases
CCGCGTGGCCTGGAGGTTGCCAGCCGTTTTACTTGGCGGCGCGTCGCCGAGGCACATCTTTCCACCTATGCAACTTTGAA
GGAGGCAGCCCATGCCTGAG

Downstream 100 bases:

>100_bases
AAGGACATACGATGACCCGATCCCTGAAGCCGCATTACAGCGCCGTCGTCGTGGGAGGCGGCCAGGCCGGCCTCTCCGCC
AGCCATTACCTTAGGAAACA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 92; Mature: 92

Protein sequence:

>92_residues
MRFVITWPDGQEETCYSPSLIIREFFTEGESYPVADFVERSRKALTIASDRVEAKYGFACSSANDQLARIETAALPFLER
ADARVRCETFIL

Sequences:

>Translated_92_residues
MRFVITWPDGQEETCYSPSLIIREFFTEGESYPVADFVERSRKALTIASDRVEAKYGFACSSANDQLARIETAALPFLER
ADARVRCETFIL
>Mature_92_residues
MRFVITWPDGQEETCYSPSLIIREFFTEGESYPVADFVERSRKALTIASDRVEAKYGFACSSANDQLARIETAALPFLER
ADARVRCETFIL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10475; Mature: 10475

Theoretical pI: Translated: 4.49; Mature: 4.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFVITWPDGQEETCYSPSLIIREFFTEGESYPVADFVERSRKALTIASDRVEAKYGFAC
CEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHCCCCEEEEECCCCCCCCCEEE
SSANDQLARIETAALPFLERADARVRCETFIL
CCCCCCHHHHHHHHCCHHHCCCCCEEEEEECC
>Mature Secondary Structure
MRFVITWPDGQEETCYSPSLIIREFFTEGESYPVADFVERSRKALTIASDRVEAKYGFAC
CEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHCCCCEEEEECCCCCCCCCEEE
SSANDQLARIETAALPFLERADARVRCETFIL
CCCCCCHHHHHHHHCCHHHCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA