Click here to switch to the map view.

The map label for this gene is ubiX [H]

Identifier: 222102808

GI number: 222102808

Start: 473610

End: 474185

Strand: Direct

Name: ubiX [H]

Synonym: Avi_7528

Alternate gene names: 222102808

Gene position: 473610-474185 (Clockwise)

Preceding gene: 222102807

Following gene: 222102809

Centisome position: 74.96

GC content: 56.94

Gene sequence:

>576_bases
TTGAAACGCCTGATCGTTGCGATAACCGGGGCATCGGGTGCCTGTTATGGTGTACGTGCGCTGGAGATGCTCCGCGACAT
CGATGGCATTGAGAGCCATCTGATTATCTCGCCCGCAGGACTACGCACGGCGATTGAAGAAGAGGCGGTGGAAAGCGCTG
ATCAAATCCGTCAACTCGCCGATGTGGTGCATAGCCATAAGGACATCGGGGCCTCTATCGCCTCGGGTTCGTTTCGGGCG
CAAGGCATGCTGGTGGCACCTTGCTCGATCAAGACACTGAGCAGTATTGTCCATTGTTACAACGATGATCTCATTACCCG
CGCCGCAGATGTCTGCCTCAAGGAAAGGCGGCGCGTTGTGTTGATGGTGCGCGAAACGCCCTTGCATGCCGGGCATATCG
CGTTGATGGATCAGGCGACTCGCAACGGTGCGATTATCATGCCGCCGGTGCCGGGTTTCTACACCCAGCCCAAAACACTG
GCTGATCTTGTCAGCCAGACCGTTGGCCGAGCACTTGATCTCTTTGACATTGACCACCCGTCCGTCCGTCGCTGGAAGCA
GGAGGGTGATACTTGA

Upstream 100 bases:

>100_bases
CCGGAGACCGCAAGGAAGGCTATGACAAGGCATTGCCGCCGCAAGCGTCTTATGAGCGCATGAGCCGTGTGATTGCGGCG
ATCAAGCCGGAGGGCGCGGT

Downstream 100 bases:

>100_bases
TCCATTGAAACATTGGCCCCAACGCTTTTGGGGCAGATGTTTTTCGCCGTTCAAAAAACAAGGGGAACTGCGGTGGTTCG
TATGAACTGCCGTAAAACGG

Product: 3-polyprenyl-4-hydroxybenzoate decarboxylase

Products: NA

Alternate protein names: Polyprenyl p-hydroxybenzoate decarboxylase [H]

Number of amino acids: Translated: 191; Mature: 191

Protein sequence:

>191_residues
MKRLIVAITGASGACYGVRALEMLRDIDGIESHLIISPAGLRTAIEEEAVESADQIRQLADVVHSHKDIGASIASGSFRA
QGMLVAPCSIKTLSSIVHCYNDDLITRAADVCLKERRRVVLMVRETPLHAGHIALMDQATRNGAIIMPPVPGFYTQPKTL
ADLVSQTVGRALDLFDIDHPSVRRWKQEGDT

Sequences:

>Translated_191_residues
MKRLIVAITGASGACYGVRALEMLRDIDGIESHLIISPAGLRTAIEEEAVESADQIRQLADVVHSHKDIGASIASGSFRA
QGMLVAPCSIKTLSSIVHCYNDDLITRAADVCLKERRRVVLMVRETPLHAGHIALMDQATRNGAIIMPPVPGFYTQPKTL
ADLVSQTVGRALDLFDIDHPSVRRWKQEGDT
>Mature_191_residues
MKRLIVAITGASGACYGVRALEMLRDIDGIESHLIISPAGLRTAIEEEAVESADQIRQLADVVHSHKDIGASIASGSFRA
QGMLVAPCSIKTLSSIVHCYNDDLITRAADVCLKERRRVVLMVRETPLHAGHIALMDQATRNGAIIMPPVPGFYTQPKTL
ADLVSQTVGRALDLFDIDHPSVRRWKQEGDT

Specific function: Unknown

COG id: COG0163

COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polyprenyl P-hydroxybenzoate / phenylacrylic acid decarboxylases family [H]

Homologues:

Organism=Escherichia coli, GI1788650, Length=188, Percent_Identity=57.9787234042553, Blast_Score=214, Evalue=2e-57,
Organism=Saccharomyces cerevisiae, GI6320746, Length=185, Percent_Identity=47.5675675675676, Blast_Score=171, Evalue=5e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003382
- InterPro:   IPR004507 [H]

Pfam domain/function: PF02441 Flavoprotein [H]

EC number: 4.1.1.-

Molecular weight: Translated: 20794; Mature: 20794

Theoretical pI: Translated: 6.87; Mature: 6.87

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLIVAITGASGACYGVRALEMLRDIDGIESHLIISPAGLRTAIEEEAVESADQIRQLA
CCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHH
DVVHSHKDIGASIASGSFRAQGMLVAPCSIKTLSSIVHCYNDDLITRAADVCLKERRRVV
HHHHHHHHHCCHHCCCCCEECCEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCEEE
LMVRETPLHAGHIALMDQATRNGAIIMPPVPGFYTQPKTLADLVSQTVGRALDLFDIDHP
EEEECCCCCCCCEEEEECCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCH
SVRRWKQEGDT
HHHHHHHCCCC
>Mature Secondary Structure
MKRLIVAITGASGACYGVRALEMLRDIDGIESHLIISPAGLRTAIEEEAVESADQIRQLA
CCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHH
DVVHSHKDIGASIASGSFRAQGMLVAPCSIKTLSSIVHCYNDDLITRAADVCLKERRRVV
HHHHHHHHHCCHHCCCCCEECCEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCEEE
LMVRETPLHAGHIALMDQATRNGAIIMPPVPGFYTQPKTLADLVSQTVGRALDLFDIDHP
EEEECCCCCCCCEEEEECCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCH
SVRRWKQEGDT
HHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Carbon-Carbon Lyases; Carboxy-Lyases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]