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The map label for this gene is nocQ [H]

Identifier: 222102793

GI number: 222102793

Start: 456383

End: 457096

Strand: Reverse

Name: nocQ [H]

Synonym: Avi_7507

Alternate gene names: 222102793

Gene position: 457096-456383 (Counterclockwise)

Preceding gene: 222102794

Following gene: 222102792

Centisome position: 72.35

GC content: 56.16

Gene sequence:

>714_bases
ATGTTGAATGATATTTGGGAGTTGCTGATTGGCAAAGGGTGGGCGCTCGCCCTGTTGCGGGGTGGTGCTGTGACCATTGC
CATCGGCTTGCTCGGTATGCTGCTGGGGCTTGTTATTGCCACACCATTAGCGCTGTTGCGCTGGCGGCGGGTGGTTGTGA
TCTCGCAGCTGATTGATGCCTACAGCGTCATTGTCCGGGGTGTGCCGGGACTTCTGGTGATCTATCTGTTGTTTTTCGGC
TCTGTTGACTGGGTGCGAGCGATCACATCCATGTTTGGCTATCAAAACGCTGCCGAAAACGCCTATCCAATGATCATTGG
CGTGATTGCGATTGCGGCAATCTCGTGCGCCTATTCCATTGAGGTCATCAGGGGCGCACTTCAATCGGTTCCTGTCGGTC
TTATCGAGGCTGCGCACTCGCTGGCCTTGCCGGGCAAGGTGACGTTCTTTCGGGTGATTTTTCCGCTCGCGCTCAGGCTT
GCGCTGGGTGGTCTCAACAATGTCTGGCAAATGACAATCAAGGATACCTCGCTGATCTCCGTGATCGGATTGCAGGAATT
GATGCGCACAGCCGCCATCGCCGCAGGTATCACACGCTCACCGTTGCTGTTTTACGGTGTCGCCGCCCTGTTGTTTTTCA
CCCTGACGGGTGTGAGCCAGGCGATGTTTGCTCGCGCCGAGCGCTATCTCAATCGCGGGTTCAACGGGTGCTGA

Upstream 100 bases:

>100_bases
TTGGTTCAAGGACGATTATACCATCCCCTGCAAGAAGTGATCTCTCTTTTGACACGGCACATTCTGCGCAAAATCAGGAT
GTGCCGTCGGGGTGGTATGC

Downstream 100 bases:

>100_bases
CATGGACATCAATATCATCACCTATGCTGTACCCTTTCTTCTCACCGGTGCCAAAACGACCCTGCTGATTGCCGTGTTCG
GCATTGGGTTTGGTCTGCCG

Product: ABC transporter membrane spanning protein (nopaline)

Products: ADP; phosphate; L-arginine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 237; Mature: 237

Protein sequence:

>237_residues
MLNDIWELLIGKGWALALLRGGAVTIAIGLLGMLLGLVIATPLALLRWRRVVVISQLIDAYSVIVRGVPGLLVIYLLFFG
SVDWVRAITSMFGYQNAAENAYPMIIGVIAIAAISCAYSIEVIRGALQSVPVGLIEAAHSLALPGKVTFFRVIFPLALRL
ALGGLNNVWQMTIKDTSLISVIGLQELMRTAAIAAGITRSPLLFYGVAALLFFTLTGVSQAMFARAERYLNRGFNGC

Sequences:

>Translated_237_residues
MLNDIWELLIGKGWALALLRGGAVTIAIGLLGMLLGLVIATPLALLRWRRVVVISQLIDAYSVIVRGVPGLLVIYLLFFG
SVDWVRAITSMFGYQNAAENAYPMIIGVIAIAAISCAYSIEVIRGALQSVPVGLIEAAHSLALPGKVTFFRVIFPLALRL
ALGGLNNVWQMTIKDTSLISVIGLQELMRTAAIAAGITRSPLLFYGVAALLFFTLTGVSQAMFARAERYLNRGFNGC
>Mature_237_residues
MLNDIWELLIGKGWALALLRGGAVTIAIGLLGMLLGLVIATPLALLRWRRVVVISQLIDAYSVIVRGVPGLLVIYLLFFG
SVDWVRAITSMFGYQNAAENAYPMIIGVIAIAAISCAYSIEVIRGALQSVPVGLIEAAHSLALPGKVTFFRVIFPLALRL
ALGGLNNVWQMTIKDTSLISVIGLQELMRTAAIAAGITRSPLLFYGVAALLFFTLTGVSQAMFARAERYLNRGFNGC

Specific function: Component of the nopaline active transport system probably consisting of four subunits:Q, M, P and T. This system is also capable of transporting octopine provided that catabolic functions are induced with nopaline [H]

COG id: COG4215

COG function: function code E; ABC-type arginine transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787087, Length=233, Percent_Identity=32.1888412017167, Blast_Score=106, Evalue=2e-24,
Organism=Escherichia coli, GI1788646, Length=221, Percent_Identity=29.4117647058824, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI1788226, Length=215, Percent_Identity=29.3023255813954, Blast_Score=82, Evalue=5e-17,
Organism=Escherichia coli, GI1788645, Length=229, Percent_Identity=29.6943231441048, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI1787030, Length=215, Percent_Identity=31.6279069767442, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI87082239, Length=176, Percent_Identity=32.9545454545455, Blast_Score=62, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 25511; Mature: 25511

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNDIWELLIGKGWALALLRGGAVTIAIGLLGMLLGLVIATPLALLRWRRVVVISQLIDA
CCHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YSVIVRGVPGLLVIYLLFFGSVDWVRAITSMFGYQNAAENAYPMIIGVIAIAAISCAYSI
HHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH
EVIRGALQSVPVGLIEAAHSLALPGKVTFFRVIFPLALRLALGGLNNVWQMTIKDTSLIS
HHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHEEHCCCHHHHH
VIGLQELMRTAAIAAGITRSPLLFYGVAALLFFTLTGVSQAMFARAERYLNRGFNGC
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MLNDIWELLIGKGWALALLRGGAVTIAIGLLGMLLGLVIATPLALLRWRRVVVISQLIDA
CCHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YSVIVRGVPGLLVIYLLFFGSVDWVRAITSMFGYQNAAENAYPMIIGVIAIAAISCAYSI
HHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH
EVIRGALQSVPVGLIEAAHSLALPGKVTFFRVIFPLALRLALGGLNNVWQMTIKDTSLIS
HHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHEEHCCCHHHHH
VIGLQELMRTAAIAAGITRSPLLFYGVAALLFFTLTGVSQAMFARAERYLNRGFNGC
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; L-arginine [Periplasm]; H2O [C]

Specific reaction: ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1732218; 11743193; 11743194 [H]