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The map label for this gene is rbsB [H]

Identifier: 222102773

GI number: 222102773

Start: 432816

End: 433775

Strand: Direct

Name: rbsB [H]

Synonym: Avi_7473

Alternate gene names: 222102773

Gene position: 432816-433775 (Clockwise)

Preceding gene: 222102772

Following gene: 222102774

Centisome position: 68.51

GC content: 57.08

Gene sequence:

>960_bases
ATGATGACCCGGACTTTTACACGTAGAACCATCAATGCAGCCTTGGCTGTCACGGCCCTTACCGGTCTGAGCCTCACGGC
AGGAATTGCCAATGCTGCGCAAAAAACCTTTGCGCTGGTGCAGATCAATCAACAGGCACTGTTTTTCAACCAGATCAATC
AGGGTGCACAGAAGGCCGCTGATGCGGCGGGCGCAAAACTGGTAATCTTCAATGCCAACAATGACCCTGCGGCCCAAAAC
AGCGCCATCGAGACCTATATTCAGCAGAAGGTGGACGGCATTGCCGTTGTGGCCATCGACGTCAACGGCATTATGCCAGC
GGTCAAACAGGCAGCGGATGCAGGCATTCCGGTGGTCGCCATCGATAGCATTCTGCCTGCTGGCCCCCAGAAGGCACAGA
TCGGCGTCGATAACGCCAAGGCGGGTGCCGATATTGGCAAATTCTTCGTCGATTACGTCAAGAAGGACATGGGCGGCAAA
GCCAAGCTGGGCGTTGTGGGCGCGCTGAACTCCTTCATCCAGAATATCCGCCAGAAGGGCTTTGAAGACACCATCAAGGG
CGTCTCCGGCATCACGTCGGCAGGTGTGGTTGATGGCCAGAACGTCCAAGACAATGCGCTGGCAGCGGCTGAAAACCTGA
TCACCGGCAATCCGGATATGACGGCAATCTATGCCACGGGCGAGCCAGCGCTGCTGGGTGCCGTTGCCGCCGTGCAAAGC
CAGAGCAAGCAGGACAGTATCAAAGTGTTTGGCTGGGATCTGACCGCTCAGGCGATTGCCGGTATTGACGCCGGTTATGT
TGCCGCGGTGATCCAGCAGGACCCGGCAGCCATGGGTGAAGCGGCTGTAAAAGCGCTGAAGACCATCTCGGACGGCGGCA
AGGTTGAAAAGACCATTGCCGTGCCGGTCACCATCGTCACCAAGGCCAATGTTGAGCCTTACCGGGCCGTGTTCAAATGA

Upstream 100 bases:

>100_bases
GCATCGGAGGAATTGCTGCCAGTGGAAATCGTCGTGCGGAACTCCGTTGCACCGCCTGCGAAATAACAAAAGCAATGGGC
AAACCTAACCAGAGGATGGA

Downstream 100 bases:

>100_bases
TTTCCGGTGGACAGCTCCCAACCGCTGTCCCTGGAGCCGGGGGAGTTGATCTCCCCCGGCAACCCGGAGAAGGCGGTGCG
CGTGAACCCCGGATTTCGCT

Product: ABC transporter nucleotide binding/ATPase protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 319; Mature: 319

Protein sequence:

>319_residues
MMTRTFTRRTINAALAVTALTGLSLTAGIANAAQKTFALVQINQQALFFNQINQGAQKAADAAGAKLVIFNANNDPAAQN
SAIETYIQQKVDGIAVVAIDVNGIMPAVKQAADAGIPVVAIDSILPAGPQKAQIGVDNAKAGADIGKFFVDYVKKDMGGK
AKLGVVGALNSFIQNIRQKGFEDTIKGVSGITSAGVVDGQNVQDNALAAAENLITGNPDMTAIYATGEPALLGAVAAVQS
QSKQDSIKVFGWDLTAQAIAGIDAGYVAAVIQQDPAAMGEAAVKALKTISDGGKVEKTIAVPVTIVTKANVEPYRAVFK

Sequences:

>Translated_319_residues
MMTRTFTRRTINAALAVTALTGLSLTAGIANAAQKTFALVQINQQALFFNQINQGAQKAADAAGAKLVIFNANNDPAAQN
SAIETYIQQKVDGIAVVAIDVNGIMPAVKQAADAGIPVVAIDSILPAGPQKAQIGVDNAKAGADIGKFFVDYVKKDMGGK
AKLGVVGALNSFIQNIRQKGFEDTIKGVSGITSAGVVDGQNVQDNALAAAENLITGNPDMTAIYATGEPALLGAVAAVQS
QSKQDSIKVFGWDLTAQAIAGIDAGYVAAVIQQDPAAMGEAAVKALKTISDGGKVEKTIAVPVTIVTKANVEPYRAVFK
>Mature_319_residues
MMTRTFTRRTINAALAVTALTGLSLTAGIANAAQKTFALVQINQQALFFNQINQGAQKAADAAGAKLVIFNANNDPAAQN
SAIETYIQQKVDGIAVVAIDVNGIMPAVKQAADAGIPVVAIDSILPAGPQKAQIGVDNAKAGADIGKFFVDYVKKDMGGK
AKLGVVGALNSFIQNIRQKGFEDTIKGVSGITSAGVVDGQNVQDNALAAAENLITGNPDMTAIYATGEPALLGAVAAVQS
QSKQDSIKVFGWDLTAQAIAGIDAGYVAAVIQQDPAAMGEAAVKALKTISDGGKVEKTIAVPVTIVTKANVEPYRAVFK

Specific function: Involved in the high-affinity D-ribose membrane transport system [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 2 family [H]

Homologues:

Organism=Escherichia coli, GI1788898, Length=312, Percent_Identity=30.4487179487179, Blast_Score=101, Evalue=7e-23,
Organism=Escherichia coli, GI1790192, Length=295, Percent_Identity=28.8135593220339, Blast_Score=92, Evalue=4e-20,

Paralogues:

None

Copy number: 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001761 [H]

Pfam domain/function: PF00532 Peripla_BP_1 [H]

EC number: NA

Molecular weight: Translated: 32782; Mature: 32782

Theoretical pI: Translated: 8.75; Mature: 8.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMTRTFTRRTINAALAVTALTGLSLTAGIANAAQKTFALVQINQQALFFNQINQGAQKAA
CCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEEEEEEECCHHHHHHHHHHHHHHHH
DAAGAKLVIFNANNDPAAQNSAIETYIQQKVDGIAVVAIDVNGIMPAVKQAADAGIPVVA
HHCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHCCCCEEE
IDSILPAGPQKAQIGVDNAKAGADIGKFFVDYVKKDMGGKAKLGVVGALNSFIQNIRQKG
ECCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHCC
FEDTIKGVSGITSAGVVDGQNVQDNALAAAENLITGNPDMTAIYATGEPALLGAVAAVQS
HHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHH
QSKQDSIKVFGWDLTAQAIAGIDAGYVAAVIQQDPAAMGEAAVKALKTISDGGKVEKTIA
CCCCCCEEEEEECHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEEE
VPVTIVTKANVEPYRAVFK
EEEEEEEECCCCHHHHHCC
>Mature Secondary Structure
MMTRTFTRRTINAALAVTALTGLSLTAGIANAAQKTFALVQINQQALFFNQINQGAQKAA
CCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEEEEEEECCHHHHHHHHHHHHHHHH
DAAGAKLVIFNANNDPAAQNSAIETYIQQKVDGIAVVAIDVNGIMPAVKQAADAGIPVVA
HHCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHCCCCEEE
IDSILPAGPQKAQIGVDNAKAGADIGKFFVDYVKKDMGGKAKLGVVGALNSFIQNIRQKG
ECCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHCC
FEDTIKGVSGITSAGVVDGQNVQDNALAAAENLITGNPDMTAIYATGEPALLGAVAAVQS
HHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHH
QSKQDSIKVFGWDLTAQAIAGIDAGYVAAVIQQDPAAMGEAAVKALKTISDGGKVEKTIA
CCCCCCEEEEEECHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEEE
VPVTIVTKANVEPYRAVFK
EEEEEEEECCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377; 7921236 [H]