| Definition | Agrobacterium vitis S4 plasmid pAtS4e, complete sequence. |
|---|---|
| Accession | NC_011981 |
| Length | 631,775 |
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The map label for this gene is iolE [H]
Identifier: 222102764
GI number: 222102764
Start: 421804
End: 422682
Strand: Reverse
Name: iolE [H]
Synonym: Avi_7455
Alternate gene names: 222102764
Gene position: 422682-421804 (Counterclockwise)
Preceding gene: 222102766
Following gene: 222102763
Centisome position: 66.9
GC content: 56.2
Gene sequence:
>879_bases ATGGAGTCGACTATGAAGCTTGCGACAGCGCCCGACGCCTGGGGCGTCTGGTATGCAGACGATCCGCGACAGACCCCTTG GGAGCGCTATCTGGACGAGGTACGAGACTCCGGCTTCACAGCGACAGAGACCGGGCCTTGGGGCTATCTGCCCACCGATC CATCTCATTTGACAGATGCCCTCGGTAGCCGTGGATTGAGCGTATGCGGATCAGCCCTTGTACACCTGCTTGCCCCCGCA GACGCCATGGAAACCCTGCGCCCAAGGCTTGAGCAGACCTGCGGTCTTTTGAAAGCCATGAAGGCTGAGTGGGTGGTGCT GATGGATGATTCAGACCTGCCCCTCCCCGGCCAAAGCCGCGCGCTTTCCCCGCACGACTGGGCATCGATGATCCGCAACA TCAAGGATGCGGCCCGTTATGTCACGGAAGAGCATGGACTTTCTTTTGTTTTTCATCCGCATGTCGGCTCCGGCGTGGAA ACGGAGGCCGAAGTCATCCGCCTTCTGGAAGAAACGTCGGAAGATAGCGTCGGCCTTTGCTTCGATTTTGGTCATCACGC CTATACCGGTGCCGATGCCGTGGCTTTTATGAAGCGCTATGCGGACCGTATTCCCTATTACCACTTCAAGAATGTAGATC CCGTTTTGCTGGCGCATATACGCCAAAACAACATCAACTTCATTGAGGGCTTCCAGTCGGGCGTTATGTGCGAGCTGGAC AAGGGCATGGTGGATTTTGCAGAGGTTCGGGATTTTCTTGCAACCCGTGGGTTTGATGGCTATGCCGTTTATGAACAGGA TATGTATCCCTGCCCTCCGGAGAAGCCTTTTCCGATTGCGTGCCACAACCGGCAGGTCTTGCGTGAGCTTGGGATTTAA
Upstream 100 bases:
>100_bases CTTTCTTTTGTCTGATTTTCAAGAAAATAGCATTTTTAACGCGACACTCTTTTGCTTTCAAATCGGATCGATTAAGGTGT CATTGTAGATTTAATAATCA
Downstream 100 bases:
>100_bases CATCCATACCGAGAGTGGCGTGCGACAATAGGACGAAGGAACAGCCGTGACACTTCTGGATCGGTTTGATGGAGGCTTTG CCCGCGACGGTGAGGACATT
Product: hypothetical protein
Products: NA
Alternate protein names: 2-keto-myo-inositol dehydratase; 2KMI dehydratase [H]
Number of amino acids: Translated: 292; Mature: 292
Protein sequence:
>292_residues MESTMKLATAPDAWGVWYADDPRQTPWERYLDEVRDSGFTATETGPWGYLPTDPSHLTDALGSRGLSVCGSALVHLLAPA DAMETLRPRLEQTCGLLKAMKAEWVVLMDDSDLPLPGQSRALSPHDWASMIRNIKDAARYVTEEHGLSFVFHPHVGSGVE TEAEVIRLLEETSEDSVGLCFDFGHHAYTGADAVAFMKRYADRIPYYHFKNVDPVLLAHIRQNNINFIEGFQSGVMCELD KGMVDFAEVRDFLATRGFDGYAVYEQDMYPCPPEKPFPIACHNRQVLRELGI
Sequences:
>Translated_292_residues MESTMKLATAPDAWGVWYADDPRQTPWERYLDEVRDSGFTATETGPWGYLPTDPSHLTDALGSRGLSVCGSALVHLLAPA DAMETLRPRLEQTCGLLKAMKAEWVVLMDDSDLPLPGQSRALSPHDWASMIRNIKDAARYVTEEHGLSFVFHPHVGSGVE TEAEVIRLLEETSEDSVGLCFDFGHHAYTGADAVAFMKRYADRIPYYHFKNVDPVLLAHIRQNNINFIEGFQSGVMCELD KGMVDFAEVRDFLATRGFDGYAVYEQDMYPCPPEKPFPIACHNRQVLRELGI >Mature_292_residues MESTMKLATAPDAWGVWYADDPRQTPWERYLDEVRDSGFTATETGPWGYLPTDPSHLTDALGSRGLSVCGSALVHLLAPA DAMETLRPRLEQTCGLLKAMKAEWVVLMDDSDLPLPGQSRALSPHDWASMIRNIKDAARYVTEEHGLSFVFHPHVGSGVE TEAEVIRLLEETSEDSVGLCFDFGHHAYTGADAVAFMKRYADRIPYYHFKNVDPVLLAHIRQNNINFIEGFQSGVMCELD KGMVDFAEVRDFLATRGFDGYAVYEQDMYPCPPEKPFPIACHNRQVLRELGI
Specific function: Catalyzes the dehydration of inosose (2-keto-myo- inositol, 2KMI or 2,4,6/3,5-pentahydroxycyclohexanone) to 3D- (3,5/4)-trihydroxycyclohexane-1,2-dione (D-2,3-diketo-4-deoxy-epi- inositol) [H]
COG id: COG1082
COG function: function code G; Sugar phosphate isomerases/epimerases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the iolE/mocC family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013022 - InterPro: IPR012307 [H]
Pfam domain/function: PF01261 AP_endonuc_2 [H]
EC number: =4.2.1.44 [H]
Molecular weight: Translated: 32745; Mature: 32745
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESTMKLATAPDAWGVWYADDPRQTPWERYLDEVRDSGFTATETGPWGYLPTDPSHLTDA CCCCCCEEECCCCCEEEECCCCCCCHHHHHHHHHHHCCCEECCCCCCCCCCCCHHHHHHH LGSRGLSVCGSALVHLLAPADAMETLRPRLEQTCGLLKAMKAEWVVLMDDSDLPLPGQSR HHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCC ALSPHDWASMIRNIKDAARYVTEEHGLSFVFHPHVGSGVETEAEVIRLLEETSEDSVGLC CCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCCEEE FDFGHHAYTGADAVAFMKRYADRIPYYHFKNVDPVLLAHIRQNNINFIEGFQSGVMCELD EECCCCHHCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHCCCCEEEEC KGMVDFAEVRDFLATRGFDGYAVYEQDMYPCPPEKPFPIACHNRQVLRELGI CCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHCC >Mature Secondary Structure MESTMKLATAPDAWGVWYADDPRQTPWERYLDEVRDSGFTATETGPWGYLPTDPSHLTDA CCCCCCEEECCCCCEEEECCCCCCCHHHHHHHHHHHCCCEECCCCCCCCCCCCHHHHHHH LGSRGLSVCGSALVHLLAPADAMETLRPRLEQTCGLLKAMKAEWVVLMDDSDLPLPGQSR HHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCC ALSPHDWASMIRNIKDAARYVTEEHGLSFVFHPHVGSGVETEAEVIRLLEETSEDSVGLC CCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCCEEE FDFGHHAYTGADAVAFMKRYADRIPYYHFKNVDPVLLAHIRQNNINFIEGFQSGVMCELD EECCCCHHCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHCCCCEEEEC KGMVDFAEVRDFLATRGFDGYAVYEQDMYPCPPEKPFPIACHNRQVLRELGI CCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA