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The map label for this gene is potB [C]

Identifier: 222102760

GI number: 222102760

Start: 417721

End: 418590

Strand: Direct

Name: potB [C]

Synonym: Avi_7451

Alternate gene names: 222102760

Gene position: 417721-418590 (Clockwise)

Preceding gene: 222102759

Following gene: 222102761

Centisome position: 66.12

GC content: 55.98

Gene sequence:

>870_bases
ATGGTGATGCAAACGCACGGCCTCTCGGAAGGATCGCGCTGGACCGGATTGGCCTTTGTGGCCATTCCGGTTCTGTCCAT
CGTGATTTTTCTGTTCTATCCGGCGGCGCTAACCATTGTCAGCACTTTCTGGCGTGAAGGCCGTGATGGCGTCCATGCGC
TGAATTTTGACAGCTATGTTTTCTTCTTCACCGATGCCTATAGCCTTGCCAATCTTGGCAGAACGCTCTGGACCACATTC
GTTAGCCTTGCGCTGCTGATTGCTATCAATCTGCCGATTGCGCTTTATATGCGCTTTACCCGTGGGCCGCTGGCCAGCCT
CATTCAAGGCTTGGCGCTGTTTCCCATGTTTGTTCCCGGCATTATCATCTGCTACGCGCTGATCCGCTATCTGGGGCCGA
ATGGCTGGTTACAGAGCCTGCTATCCTTGATCGGGTTCCATCATTATGCATCGCCCTATCTGACTCCTTGGGGGCCGGTG
ATCGGCCTGCTCTGGGACGGTATGCCGCTCACTTTGCTGATCTTGATCTCCGGCCTGTCCGGCATTTCGGATGCCTCGAT
TGAAGCGGCCCGTGATGTGGGCGCGGGGCGGCTGCGGATTCTGGTGCGCATCATCATTCCTCAAATCATGCATTCCCTGT
TGATCGTATCGGCGCTGAATTTTCTAGGTTTTTTCGGCCAAGCCCTGATGCCCTTCATGCTGGGGCCTACAAGCCCGGAA
ATGATGGGGCCGTTCATGCTGCGCACATTTGCAAGCGTGCGTGATCCGCTGCAAGCCTCAACGCAGGCGACCATCACCTT
TCTGATCTGCTCTCTTGCTGGCATCGCCTATGTCCGCTCGATTGCCCGCAAGCCCCAAGACGGAGAGTGA

Upstream 100 bases:

>100_bases
AGTCGCGCCCAAATCCATCCCGCTTTTCCCCGGCACATGGGAGCCTGCACTGTTTGAGGGCTGGTATCGTAACGTCGCAT
CGAACATCAAACGCTGAGGC

Downstream 100 bases:

>100_bases
TGATGTTCCTGTCCAGTCGCCGCCATGATGTGTTTGGCCTGATCATTCTGCTGTTTCTGATTGTCTTTATCGTTCTGCCC
GTGCTCACGGTTTTTCTCTG

Product: ABC transporter membrane spanning protein

Products: phosphate; putrescine [Cytoplasm]; ADP; spermidine [Cytoplasm] [C]

Alternate protein names: ABC Transporter Permease Protein; ABC Transporter Membrane Spanning Protein; Permease Component Of ABC Transporter; Spermidine/Putrescine ABC Transporter Permease Protein; Polyamine ABC Transporter Permease

Number of amino acids: Translated: 289; Mature: 289

Protein sequence:

>289_residues
MVMQTHGLSEGSRWTGLAFVAIPVLSIVIFLFYPAALTIVSTFWREGRDGVHALNFDSYVFFFTDAYSLANLGRTLWTTF
VSLALLIAINLPIALYMRFTRGPLASLIQGLALFPMFVPGIIICYALIRYLGPNGWLQSLLSLIGFHHYASPYLTPWGPV
IGLLWDGMPLTLLILISGLSGISDASIEAARDVGAGRLRILVRIIIPQIMHSLLIVSALNFLGFFGQALMPFMLGPTSPE
MMGPFMLRTFASVRDPLQASTQATITFLICSLAGIAYVRSIARKPQDGE

Sequences:

>Translated_289_residues
MVMQTHGLSEGSRWTGLAFVAIPVLSIVIFLFYPAALTIVSTFWREGRDGVHALNFDSYVFFFTDAYSLANLGRTLWTTF
VSLALLIAINLPIALYMRFTRGPLASLIQGLALFPMFVPGIIICYALIRYLGPNGWLQSLLSLIGFHHYASPYLTPWGPV
IGLLWDGMPLTLLILISGLSGISDASIEAARDVGAGRLRILVRIIIPQIMHSLLIVSALNFLGFFGQALMPFMLGPTSPE
MMGPFMLRTFASVRDPLQASTQATITFLICSLAGIAYVRSIARKPQDGE
>Mature_289_residues
MVMQTHGLSEGSRWTGLAFVAIPVLSIVIFLFYPAALTIVSTFWREGRDGVHALNFDSYVFFFTDAYSLANLGRTLWTTF
VSLALLIAINLPIALYMRFTRGPLASLIQGLALFPMFVPGIIICYALIRYLGPNGWLQSLLSLIGFHHYASPYLTPWGPV
IGLLWDGMPLTLLILISGLSGISDASIEAARDVGAGRLRILVRIIIPQIMHSLLIVSALNFLGFFGQALMPFMLGPTSPE
MMGPFMLRTFASVRDPLQASTQATITFLICSLAGIAYVRSIARKPQDGE

Specific function: Required For The Activity Of The Bacterial Periplasmic Transport System Of Putrescine And Spermidine. [C]

COG id: COG1176

COG function: function code E; ABC-type spermidine/putrescine transport system, permease component I

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31706; Mature: 31706

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVMQTHGLSEGSRWTGLAFVAIPVLSIVIFLFYPAALTIVSTFWREGRDGVHALNFDSYV
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCEE
FFFTDAYSLANLGRTLWTTFVSLALLIAINLPIALYMRFTRGPLASLIQGLALFPMFVPG
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
IIICYALIRYLGPNGWLQSLLSLIGFHHYASPYLTPWGPVIGLLWDGMPLTLLILISGLS
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHCC
GISDASIEAARDVGAGRLRILVRIIIPQIMHSLLIVSALNFLGFFGQALMPFMLGPTSPE
CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
MMGPFMLRTFASVRDPLQASTQATITFLICSLAGIAYVRSIARKPQDGE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MVMQTHGLSEGSRWTGLAFVAIPVLSIVIFLFYPAALTIVSTFWREGRDGVHALNFDSYV
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCEE
FFFTDAYSLANLGRTLWTTFVSLALLIAINLPIALYMRFTRGPLASLIQGLALFPMFVPG
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
IIICYALIRYLGPNGWLQSLLSLIGFHHYASPYLTPWGPVIGLLWDGMPLTLLILISGLS
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHCC
GISDASIEAARDVGAGRLRILVRIIIPQIMHSLLIVSALNFLGFFGQALMPFMLGPTSPE
CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
MMGPFMLRTFASVRDPLQASTQATITFLICSLAGIAYVRSIARKPQDGE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: putrescine [Periplasm]; H2O; ATP; spermidine [Periplasm] [C]

Specific reaction: ATP + putrescine [Periplasm] + H2O = ADP + phosphate + putrescine [Cytoplasm] ATP + spermidine [Periplasm] + H2O = ADP + phosphate + spermidine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA